Pollicipes pollicipes (gooseneck barnacle): 119105475
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Entry
119105475 CDS
T08250
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi04140
Autophagy - animal
ppoi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119105475
04148 Efferocytosis
119105475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppoi04131
]
119105475
Membrane trafficking [BR:
ppoi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119105475
Hops complex
119105475
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-rbx1
zf-RING_2
TPR_Vps41
zf-C3H2C3
zf-C3HC4
NPF
TPR_11
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
119105475
NCBI-ProteinID:
XP_037084835
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MALLQWRKFNFFEVTKEVDNGAVAEALQSGQVTCTASGRGYLVLGDSRGLAHFINRQLEV
VSHRVFDAAVSQLVQLRFCPVLAAAGEDELGVSSIKILGLEQLDGGGAPRLLRQLKLPPA
ADGGTSVTCLNVHENLLFMSAGFTDGRVILWRGDVTRERSGKHQVLHAGAAPVTGLGFRT
SGKTSHLFVASTQEVCCYNITFKDKENQIQLDQAGCSPRCAVMSEGLAEPQFTIGRPDAI
YCYSANERGACFVFEGDKRLLHWFKGYLAVLTVEPARGGGSEPAAPDKHVLTIYDVSNKY
VALSVALRDVTHVVSDWGQLYVVTADRRLLRLTERDTQAKLKVLFKKNLYDMAIRLAQSQ
QYDADGLVDIFREYGDHLHAKGDFNGAIQQYIKTIGKLEPSYVIRKYLDTQRINDLALYL
QALHAAGRATEDHTTLLINCYTKLRDTIQLDMFIQGEDGAVGYDVDTAVRVCRSSGYYEQ
ALTMARRHQQTDRVIAILTEDLADPGRALQYVAQLPHQQCEAAILRHGAALLKERPQETV
ELLKKLCCAEPQSEAEAELAVPIERYLDLFVAQPDAQAGFLQHLMEVRPDALDSDALLAL
LELYLADGSAAGDGAVQRTESALRLLDSPRLDLPLALHLCHSRGFQQGTAKLYERAGMHS
QILQTQLEAGDYEPALETCRRYGQTLPHLWLEALRALTKQLEAPAGVIVTVLDTIEKGKL
APSMEVLEMLVESPTLELGTIRDYMSRTLSADQADIDADAQTADKYAAEASRIREQIHRE
ENSAMVFQRTSCAACNQQLELPSVHFFCPHSYHQHCFQSYADRDDDCPLCLPEHSQLLSD
LRSQSGAEETEAQFFQQLETADDMFSVVADYFGKGTFSRPRPEEAAAESGAPELTPAPNG
MSAYLAAGAARTGPGLPAADSEARVRAAEQRSQPTQSVAEGRLRAAQASQVAPTVAEGRL
RAAQVSQVAPSVAEGRLRAAQASQVVPSVAEGRLRAAEVRQPPLSRPTSEGRQRLQEAAR
TADAKTRASDRRPEMAQTVSRAAAPNPFEEGPNPFDEDATNPFLDDEADASNPFAGDADE
YDKSLNPFEE
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggcactgttgcagtggagaaagttcaacttctttgaagtaacaaaagaagttgacaat
ggggcagttgcagaggcattacagtccggtcaggtgacctgtactgccagcggtcggggg
tacctggtgctgggtgacagccgtggcctggcacacttcatcaaccgccagctggaggtg
gtctcacaccgcgtgtttgatgcggctgtgtcgcagctcgtacagctgcgcttctgtccc
gttctggccgccgctggagaggatgaactgggagtgtcatcgatcaaaatactgggcctg
gaacagttggatggtggcggcgcccctcggctgttgcgacaactaaaactgcctcctgcg
gctgacggcgggacctcagtcacttgcctcaatgttcatgaaaatctcctgttcatgtcc
gccggtttcacggacggtcgtgtcatcctgtggcgcggtgacgtgacgcgcgagcggtcc
ggtaagcaccaggtgctgcacgcgggcgcggcgcccgtcaccggactgggcttccgcacc
tccggcaagaccagccacctatttgtggccagcacgcaggaggtctgctgctacaacatc
actttcaaggacaaggaaaaccagatccagctggaccaggcgggctgctccccgcgctgc
gccgtcatgtccgagggactggcggagccgcagttcaccatcggcaggccggacgctatc
tactgctacagcgcgaacgagcgcggcgcctgtttcgtgttcgagggcgataagcggctg
ctgcactggtttaaaggctacctggccgtgctgacagtggagccggcccgcggcggcggc
tccgaaccggccgcgcccgacaagcacgtgctgaccatctacgacgtgagcaataagtac
gtggcgctgagcgtggcactgcgtgacgtgacgcacgtggtgagcgactggggccagctg
tacgtggtaacggccgaccggcgcctgcttcgcctcaccgagcgggacacgcaggccaag
ctcaaggtgctcttcaaaaagaacctctacgacatggccatacgcctggcgcagtcccag
cagtacgacgccgacggtctggtggacatcttccgggagtacggcgaccacctgcacgcc
aagggcgacttcaacggcgccatccagcagtacatcaagaccatcggcaagctggagccc
tcctacgtcatcagaaagtacctggacacccagcgcatcaacgacctggcgctgtacctg
caggcactgcacgcagctggacgggccaccgaggaccacaccaccctgctgatcaactgt
tacaccaaactgcgcgacaccatacagctggacatgttcatacagggcgaggacggcgcg
gtggggtacgacgttgacacagcagtgcgcgtgtgccggagctccggctactacgagcag
gcgctgacgatggcccggcgccaccagcagacggaccgggtcatcgccatcctcaccgag
gatctggccgacccgggccgcgcgctgcagtacgtcgcacagctgccgcatcagcagtgc
gaggcggccatcctgcgacacggcgccgctctgctgaaggagcggccgcaagagacggtc
gagctgctgaagaagctctgctgtgccgagccgcagtcggaggcggaggcggagctggcg
gtgcccattgaacggtacctggacctgttcgtggcgcagccagacgcccaggccggcttc
ctccagcacctgatggaggtgcggccggacgcgctggactcggacgcgctattggcgctg
ctggagctgtacctggccgacggcagcgccgcgggcgacggtgcggtgcagcggactgag
agcgctctccgcctgctggacagcccgcgactggacctgccgctggcgctgcacctctgc
cactcgcgcggcttccagcagggcacggccaagctgtacgagcgtgccggcatgcactca
cagatcctgcaaacacagctagaggcgggagactacgagccggcgctggagacgtgtcgc
cggtacggccagacactgccgcacctttggctggaggcgctgcgggcgctcaccaagcag
ctggaggcgccggccggcgtcatcgtcaccgtgctcgacacgatcgagaagggcaagctt
gcgccgagtatggaggtgctggagatgctggtggagtctccgacgctggagctgggcacc
atccgcgactacatgagccgcacgctgtccgctgaccaggccgacatcgacgccgacgcg
cagacggccgacaagtacgcggccgaggccagccgcatcagagagcagatacaccgcgag
gagaacagcgccatggtgttccagcggaccagctgcgccgcctgcaaccagcagctggag
ctgccgtcggtgcacttcttctgcccgcactcgtaccaccagcactgcttccagagctac
gccgaccgcgacgacgactgtccgctctgcctgcccgagcacagccagctgctgagcgat
ctccgcagtcagtcgggcgccgaggagacggaggcgcagttcttccagcagctggagacg
gccgacgacatgttcagcgttgtggccgactatttcggcaagggcaccttctcacggccg
aggccggaggaggcggcggccgagtccggcgcgccagagctgacgcccgccccgaacggc
atgagcgcctacctggcggcgggcgcggcccgcaccggacccggcctgccagctgcggac
tcggaggcacgggtccgggcggcggagcagcgctcgcagcctacgcaatcggtggctgaa
ggccgtctgagggcggcccaagccagtcaggtggcgcccactgtggccgagggacgactc
cgagcggcccaagtcagccaggtggcgcccagcgtcgcggagggacgcctccgggcggcc
caagccagccaggtggtccccagtgtcgcggagggccggttaagggcggcagaggtccgc
cagccgccgctgagccgaccgacaagcgagggacggcagaggctgcaggaggcggcgcgg
acggcggacgccaaaaccagagcttccgaccggcgtccagagatggcgcagacggtcagc
cgggcggctgcgcccaacccttttgaagagggtccgaatccatttgacgaggacgcgacg
aatccattcctggacgatgaagctgacgccagcaatccgttcgccggggatgcggacgaa
tacgacaagagcctgaatccgttcgaagaataa
DBGET
integrated database retrieval system
