Pollicipes pollicipes (gooseneck barnacle): 119109196
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Entry
119109196 CDS
T08250
Name
(RefSeq) general transcription factor IIH subunit 3-like
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
ppoi
Pollicipes pollicipes (gooseneck barnacle)
Pathway
ppoi03022
Basal transcription factors
ppoi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppoi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119109196
09124 Replication and repair
03420 Nucleotide excision repair
119109196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppoi03021
]
119109196
03400 DNA repair and recombination proteins [BR:
ppoi03400
]
119109196
Transcription machinery [BR:
ppoi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119109196
DNA repair and recombination proteins [BR:
ppoi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119109196
BRITE hierarchy
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
119109196
NCBI-ProteinID:
XP_037088676
EnsemblRapid:
LOC119109196
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MDDSSEHLLAIILDTNLTSVVANGDEVGPVLDAILVFCNAHLMASTSNMLCLIVAHADQN
RPLFPPEAEDAHAQGHYELFSQSCADIVRQLKDMMEETPPGSHTSAPMAAGLAMSLCFIN
RISRERPPQVRLQKRVLVVTAHGTVAAQYMDFMNVFFTAQKLAIQVDACVLGQESGVLQQ
GADITGGICLRTPHARGLLQYLLWVFLPFGEQRQKLALPEPPVVDYRAACFCHRQLVSVG
FVCSVCLSIFCKFAPICSTCHTVFKVKGMSLPKPTKRKRAKHGL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggacgactcttccgagcatctgttggccattatattggacacaaatttgacatcagta
gttgcgaatggcgatgaggttgggcctgtgctcgacgccatcctggtcttttgcaatgct
cacctgatggctagcacctctaatatgctatgcctgatcgtggctcacgcggaccagaac
cggcccctgtttccgcctgaggcagaggacgctcatgcgcaggggcactacgagttgttc
tcgcagtcctgtgccgacatcgtgcggcagctgaaggacatgatggaggagacgccgccg
gggtcgcacaccagcgcgccaatggccgccggcttggccatgagcctgtgctttatcaac
cgcatcagtcgggagcggccgccgcaggtgcggctgcagaagcgggtgctggttgtcacg
gcgcacggcaccgtcgccgcccagtacatggacttcatgaacgtgttcttcacagcgcaa
aagctggcgattcaggtggacgcgtgcgtgttgggtcaggaatcgggcgtgctgcagcag
ggtgccgacatcacgggtgggatctgtctgcgcacaccgcacgcgcgcggcctgctgcaa
tacctactctgggtgttcctgccgttcggtgagcagcggcaaaagctggcgctgccggag
ccgcccgtggtcgattatcgcgccgcctgcttctgccacaggcagttggtaagcgtcggc
ttcgtctgctcggtctgcctctccatcttctgtaagtttgcgcccatctgttccacgtgt
cacacggtattcaaagtcaagggcatgtccctaccgaagcctaccaaaagaaaacgggcg
aagcacgggctgtga
DBGET
integrated database retrieval system