Paenibacillus polymyxa CR1: X809_00940
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Entry
X809_00940 CDS
T02956
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ppol
Paenibacillus polymyxa CR1
Pathway
ppol00040
Pentose and glucuronate interconversions
ppol01100
Metabolic pathways
ppol02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppol00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
X809_00940
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
X809_00940
Enzymes [BR:
ppol01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
X809_00940
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Glyco_hydro_59_C
3keto-disac_hyd
Laminin_G_3
DUF6250
Laminin_G_1
Laminin_G_2
Beta_helix
SO2946-like_C
Motif
Other DBs
NCBI-ProteinID:
AHC17930
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Position
200531..202624
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AA seq
697 aa
AA seq
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MKSSLLKKCASVMLSSTLVLSLSLPLLGHAHADGNLQISDDFEQGEAQGWTAGSGNWSVV
KDGNGSTYQQSSRSESHSVKGNASWTNYSVQADVYVNDFNGSNRVYVAGRYTDSNNFYAA
SLYNKKDGALEIRKKVKGSMKTLATNKKYKLDTNTWYRVKLELSGSEIKMYVNDQLELSA
TDTSLTAGAIGLVTSKTAAQFDNVIVSGASSEVDPGTPPVNPTPGTEQPTPGVDPDVTSK
NNYNLTGFSYGNTGGGNIADTDANYKKVYNAVDLNEALKKGSKVKVIEIMNDLDLGWNEI
PSAAKVMPFSANNPVQTHPVLKKTGVSKVYIENMNGVTIFSANGAKIKHAGFVIKRSSNL
IFRNLEFDELWEWDEATKGNYDKNDWDYVTIEGTSSKVWIDHCTFNKAYDGLVDVKKGSN
GVTISWSLFKGDDRSSNSWVTQQVNAMEADKSSYPMYAYLRSSAVGMSKEDIIDIAAGQK
KAHLIGATEMASDNADLEVTLHHNYYLDIQDRMPRLRAGNAHAYNIVMDDAGLARAKKRI
TSDMAKAIAAKGYHFDVVGNGAISTENGAVLLEKSYLIDVFSPVRNNQKDPKKDDYTGKI
KAEDVIFSDNGTVFRGGSEEANSPLAPYPAKAKSFSWNGFTTLPYSYTAEDPANLVAQLQ
AKDGAGAGKLNWSSESWLKTVYNTSVTKNAIVEEDSE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgagtttgttaaaaaaatgtgcaagtgtaatgttaagcagtacgttggtactg
tctttatcattaccgttgctaggtcatgcacatgcagatggaaatttacagataagtgac
gattttgagcaaggagaagctcaaggctggaccgcaggttcggggaactggtctgtggtc
aaggatgggaatggttctacataccaacaatctagtcgaagcgaaagccattccgtcaaa
ggtaatgcctcatggacgaactatagcgtgcaagcagatgtatatgtaaatgattttaat
ggctctaatcgagtctacgttgcaggtagatacacagattccaacaacttctatgcagca
tcgttgtacaacaagaaagacggagctcttgagattcgaaaaaaagtcaaaggctctatg
aagacactggctaccaataaaaaatacaaactggacacgaatacatggtacagagtcaag
ctggaactatccggttcggaaatcaaaatgtatgtcaatgatcaactggagctgtccgca
acagacaccagcctcactgctggagccattggtttggtaacttctaaaacagctgcccaa
ttcgataatgtgattgtatccggtgcttcttctgaggtagatccaggaacaccgcctgtg
aacccaacaccaggtacagaacaaccgactcctggagtggaccctgatgtaacctctaaa
aataactataatttgactggcttttcgtatggtaatacaggtggtggcaatattgcggat
acagatgccaactacaaaaaggtttacaacgctgtagatctcaacgaagcactgaagaaa
ggcagcaaagtcaaagtgattgagattatgaatgatcttgatctcggttggaatgaaatt
cctagtgctgccaaagtaatgccttttagtgccaacaaccctgtacagacgcatcctgtt
ctgaaaaagacaggtgtgagcaaagtctatatcgaaaatatgaatggggttacgattttc
tctgccaatggtgcgaaaatcaaacatgccggctttgttatcaaaagaagctccaatttg
attttccgtaacctcgaatttgatgaactttgggagtgggatgaagcaaccaaagggaac
tatgataagaatgactgggattatgttaccatcgaaggtacaagttccaaggtatggatt
gaccattgcacatttaacaaagcctatgatggtctggtagatgtgaaaaaaggtagtaac
ggagttacgatttcttggtctttgttcaaaggagatgaccgcagctccaacagctgggta
acccaacaagtcaacgcgatggaagcagacaagtcttcctatcctatgtacgcttatctg
agaagcagtgcagtaggcatgagtaaagaagatatcattgatattgcagcaggacaaaag
aaggctcatctgattggtgctacggaaatggcttccgacaatgcagacctagaggtaacg
ctgcatcataattactacctggatattcaggatcgtatgcctcgtctgcgtgctggtaat
gctcatgcatataacatcgttatggacgatgctggattggccagagccaaaaaaagaatc
acttctgacatggctaaagcaattgccgcaaaaggataccattttgacgtcgtgggtaac
ggtgcgatttcaacagaaaacggtgcggtgttgctagaaaagtcttatttaattgatgtg
ttttctccagtgcgtaataatcaaaaagatcctaaaaaagatgactacacaggaaaaatc
aaggctgaagacgtcatcttctccgacaacggtaccgtattcagaggaggcagcgaagaa
gcgaatagcccattagccccttatcctgcgaaggccaagagcttctcgtggaatggattc
acaacgttgccatacagctatactgccgaagaccctgctaacctggttgctcaattgcag
gccaaggatggagcgggtgcaggcaagctgaactggtcgagtgaaagctggctcaaaacg
gtgtacaatacgtccgttacgaaaaatgcaatagtggaagaagattccgaatag
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