Paenibacillus polymyxa CR1: X809_32650
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Entry
X809_32650 CDS
T02956
Name
(GenBank) sporulation sigma factor SigE
KO
K03091
RNA polymerase sigma-E/F/G factor
Organism
ppol
Paenibacillus polymyxa CR1
Brite
KEGG Orthology (KO) [BR:
ppol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppol03021
]
X809_32650
Transcription machinery [BR:
ppol03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
X809_32650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
HTH_3
HTH_31
Sigma70_r4_2
HTH_19
MarR_2
HTH_23
HTH_37
KORA
TBPIP
HTH_28
Trp_repressor
HNF-1_N
Phage_CII
Motif
Other DBs
NCBI-ProteinID:
AIW42491
LinkDB
All DBs
Position
complement(3872107..3872829)
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AA seq
240 aa
AA seq
DB search
MKMKIRLALQLQYYRILFLFGLKSEEIYYIGGSEALPPPLTRDEEEYLLGKLSSGDAAVR
SMLIERNLRLVVYIARKFENTGINIEDLVSIGAIGLIKAVNTFDPEKKIKLATYASRCIE
NEILMYLRRNSKTRTEVSFDEPLNIDWDGNELLLSDVMGTENDTIYRNIEEQVDRKLLHK
ALDKLTDRERLIMELRFGLQDGEEKTQKDVADLLGISQSYISRLEKRIIKRLRKEFNKMV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
ttgaagatgaaaattaggctagcattgcaactgcaatattatcgtattttatttttattt
gggctgaaaagtgaagaaatttattatattggcggcagcgaggcgctccccccaccgctg
acgagagacgaagaagaatatttgctggggaaactttcttctggagatgcagcagtacgg
tcgatgctaatcgaaagaaatttgcggttagtcgtatatattgcccgtaaatttgagaat
acgggaatcaacattgaggatctcgtatccattggtgctattggactaatcaaagcggtt
aacacttttgatccagagaagaaaatcaaacttgcgacatatgcgtctcgatgcattgag
aatgagattttgatgtatttgcgtcgcaatagtaaaacgagaacggaagtttcttttgat
gagcctctgaatattgattgggacggtaatgaattattgctttccgatgtgatggggacg
gaaaatgataccatttaccgtaatattgaggagcaggtggaccgtaaattattgcataag
gcactggataagttgacggatcgagagcgtttaattatggagctgcgcttcggcttacaa
gacggagaagagaagacacagaaggatgttgctgacctgttgggtatctcgcaatcgtat
atttcgcgtctggaaaagcgaattataaagcgcttacgaaaagaatttaataaaatggta
taa
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