Pectobacterium polonicum: LW347_16095
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Entry
LW347_16095 CDS
T08488
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ppoo
Pectobacterium polonicum
Pathway
ppoo02024
Quorum sensing
ppoo03060
Protein export
ppoo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppoo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LW347_16095 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LW347_16095 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LW347_16095 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppoo02044
]
LW347_16095 (ffh)
Enzymes [BR:
ppoo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LW347_16095 (ffh)
Secretion system [BR:
ppoo02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LW347_16095 (ffh)
Eukaryotic Sec-SRP protein
LW347_16095 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
VirC1
cobW
AAA_31
YqeC
AAA_30
AAA_16
AAA_33
AAA_24
APS_kinase
Fe-ADH_2
AAA_14
KTI12
Helicase_RecD
TsaE
Motif
Other DBs
NCBI-ProteinID:
UVO07398
UniProt:
A0AAE9NPB2
LinkDB
All DBs
Position
complement(3571618..3572979)
Genome browser
AA seq
453 aa
AA seq
DB search
MFENLTDRLSRTLRNISGRGRLTEENIKETLREVRMALLEADVALPVVRDFINRVKERAV
GHEVNKSLTPGQEFVKIVKNELVSAMGEINAELNLAAQPPAVVLMAGLQGAGKTTSVGKL
GKFLREKQKKKVLVVSADVYRPAAIKQLETLAQQVGVDFFPSDAQEKPLAIVERALQHAK
LKFYDVLLVDTAGRLHVDDAMMDEIKQVHAAIKPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVILTKIDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFYPDRVASRILGMGDV
LSLIEDIESKVDRTQAEKLAKKLKKGDGFDLTDFLDQLKQMRNMGGMASMMSKMPGMGQL
PDNVKSQMDDKVLVRMEAIINSMTLQERAKPEIIKGSRKRRIAQGSGMQVQDVNRLLKQF
DDMQRMMKKMKNGGLAKMMRGMKGMMPPGFPGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaatttaaccgatcgactctcgcgcacattgcgcaatatcagcggccgtggg
cggttgactgaagaaaacattaaagaaacgctgcgtgaagtgcggatggcattgctggaa
gccgacgtcgcgttacccgtggtgcgtgattttatcaatcgtgtaaaagaacgtgctgtt
gggcatgaggtcaacaaaagcctgacgccaggacaagagttcgtcaagattgttaaaaac
gaacttgtcagcgcaatgggcgaaattaacgccgaactaaatctcgctgctcagccgccg
gccgtggtcctgatggccggtctgcaaggtgcgggtaaaacgaccagcgtgggcaagctg
ggtaaattcctgcgtgaaaagcaaaagaaaaaagtgctcgtggtgtctgccgacgtgtat
cgccctgcggcgattaaacagttggaaacgctggcacagcaggtgggcgtcgatttcttc
ccgtcagatgcgcaggagaagccgcttgctatcgtagaacgtgcgttacagcacgctaag
ctgaaattctacgatgtcttgctggttgataccgctggtcgcctccacgttgatgacgcg
atgatggacgaaatcaagcaggttcatgcggcaattaagcccgttgaaacgctgtttgtc
gttgatgctatgacgggtcaggatgcggcaaatacggcgaaagcctttaatgaagcgctg
ccgctgactggggtcatcctcaccaaaattgatggtgatgcccgtggtggtgcggcgttg
tctatccgccatattactggcaagcctattaaatttctcggcgtcggtgaaaaaaccgaa
gcgctggaaccgttctaccccgatcgtgtcgcatcgcgcattctcggtatgggcgatgtg
ctttcactgattgaagatattgaaagcaaggttgaccgtacacaggcagagaagctggcg
aagaagctgaaaaagggcgacggtttcgatttgaccgatttcttggatcagctcaagcaa
atgcgcaacatgggcggcatggcgagtatgatgagtaaaatgcctggcatgggtcagttg
cctgataatgttaagtcacaaatggatgacaaggttctggtgcgtatggaagcaatcatt
aattcgatgacgcttcaggaacgcgctaaacccgaaattatcaaaggttcgcgtaaacgc
cgcatcgcacagggttcaggtatgcaagtacaggatgttaaccgccttctgaaacagttc
gatgatatgcaacgaatgatgaagaagatgaaaaacggcggcctggctaaaatgatgcgc
ggtatgaaaggaatgatgccacctggatttccggggcgttaa
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