Papilio polytes (common Mormon): 106101751
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Entry
106101751 CDS
T07437
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
ppot
Papilio polytes (common Mormon)
Pathway
ppot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106101751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppot03019
]
106101751
Messenger RNA biogenesis [BR:
ppot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106101751
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
106101751
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
NOT1_connector
CNOT1_CAF1_bind
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
106101751
NCBI-ProteinID:
XP_013136529
LinkDB
All DBs
Position
Unknown
AA seq
2428 aa
AA seq
DB search
MNLDSLTFSLSRIHYLVINLSKKNFKQTSQELSQIVNHYGLEAENQLLRSLLTEAAKTSW
DTDRTGPAVNSIHASLLAQYLGSLLSHPAKSTVVCRAVDSPNRSVQKILKPSNTLLNRLS
RLLKLTTAEDVTLSLVLRRYSSKTEIAAFAKQHLKKRFLDLVQCYLDAEHGHQAERAGLQ
ECSPEVLQTLLINLAYENFRLAPVTKELFVKRLRVDFPREVVPIVLAPLLYPDDTQTPLE
EMSTADDMAVAMMDNSLAEIIRDMGYGFTASFEECKNSMLNFGAREPTAIDIARIISMMV
RYHTTMPDGPPIQTPGNFWTNHEAKKEGITHGHGETWNAEIFVQTLKELASNLNWKEVIL
QLDHPEFIVPDRQGLSLLFSILRLGLQSAGYPSNIFPVEYLCRRWTNLEGQMSLITNILK
HPDIFSLADYPFHPVSIDILKSLPETDNKEIATWRCLYLVELLLYASERGYYMQVHELFK
FPLQHCPDVLMLALLQINAPITVFQQELLSTLIPIFLGNHPNSGIILQHAWHSQNPNIKP
IIMHAMAEWYIRGDSDQSKLSRILDVAQDLKALSLLLNVQSFPFVIDLACLASRREYLKL
DKWLTDKIRDHGESFVSAMVKFLQRRCPPVMGKPAEEQLPKAAQLPPETIGTMLTCLQLC
APNVVQELQEAIYNVVATCQALIINKTRQTMAGIARPHTRVIETPFNPAALGGQLFTPHV
DSIANLTPNVANMTLGAPVNTAFAMPGTLGPLVPPPGSPSRLLGPGPNSPYPMMAIPHNP
NIPNMGALRMAQMPPMDKFRLPDQIHFPELMHNVSKEIEDEANGYFQRIYNHPPHPTLSI
DEVLEMLKKFQDSPNKREREVFSCMLRNLFEEYKFFPQYPDKELHITAQLFGGIIEKGLV
PTYVSLGLALRFVLDALRKPEGSKMYYFGIAALDRFKSRLKDYHKYCEHVRAIPHFSEFP
PHLIEYIEYGLQSQEPPTKPQGPVLPATLAAMLNQNTVVTVSAPYRTVVGAPTPMSVISK
VANCVAGGIGSRPSIAIATNIDTLLTATDREEKINAPPEAIQDKTAFIFNNLSQLNLQTK
CEELKEILTEEYYPWLSQYLVMKRASIEFNFHALYSNFLDVLKAREVNRLVIIETYRNIK
VLLRSDKSIANFSDRSLLKNLGHWLGMLTLARNQPILLVDIDLKALLLEAYHKGQQELLY
VVPFVAKVLESTARSLAFKPPNPWTMGLMNVLAELHQEPDLKLNLKFEIEVLCKNLSIDI
SELKPTLYLKDPEKHRLIEFQLSQPKVNKEPVAVVPINQAIVQAPQMQMMPPQPTMIPIE
EMTLSVPPPPLGMCPDPTLMGILGMPEPRFNYLDVNVTSTSAFGQKICFNHHILLFQNYP
HLKQFVKPAIERSIQEWIHPVVDRSIKYALTTCEQIIRKDFALDPDEGRMRTCAHHMMRN
LTAGMAMITCREQIVSTISTNLKAAFLTALIPANPQQLVFQKDIVESAAAVLATENMELA
CAFIQKTAVEKALPELDKRLMNDYEIRKQARIENRRYYDPIVLTYQTENLPERVRLRMGG
PMDMQISVYEEFACNIPGFMPLRDAGMFIPKPSQEQIPQLTFSQVINPTQVYGADEMGGL
ISAAEMFLSSVLNTQSFPVQATNMHTLLECLVIARRNRDIVSGCNLLQRAVEGLLDGHII
QSGVNAEHVDLMTRYRDIHLRVLKLLEDARVYGHVWTTKQITCCLTECRDELRYNIEAVD
CLIRNHLINMPQYDLALAHLMDNGNNYVAVAFAMQLVQLYLVDDRNNIFVNESDLYHTTE
TLVRMMAHPQQPPPEGLATLIETLRINQDPSAYLGERMPLGPTAHIHSGILQVRNREYDD
PPGLQEKTDNVLHEWRTLLQSPLTDVEFSQNFNIYVHRMNMNGILKSDDMITRFFRIATQ
MCIQNVYQQLNEERANPPPVPPKREKYYVMCDSFIKLVTLLIKNTADAGNPTPKLNLLNK
ILGIIAGCLLQDHEEPGNNFQQLPYHRLLLILFLDMNMAEPVLESMNYQVLTAFCHTLRI
IRPSVAPGFCYAWLEFLSHRSFINRVLAVTPQQKLYHCFIQGWGMYSTLLIDLFKFLDPF
LRNTELGAPVMALYKGTLKVLLVLLHDFPEFLCDYHFGFCDEIPPNCIQMRNLILSAFPR
NMRLPDPFTPNLKVDLLAEIALSPRAVINYATIIPITQFKKDLDAYLKARTPVTFLSELR
SNMQFPQVGSEPARRYNTQLLNAVVLYVGAQAIAYIRSKGQTPNMTTIAHSSHMDIFQNF
TVDFDYEGRYLFFNAIANQLRYPNSHTHYFSCCLLYLFAEANSEAIQEQITRMLLERLIV
NRPHPWGLLITFIELIKNPVYKFWSHEFVHCAPEIEKLAKRRNATSEHQPALHLVRSAQA
VEPTVQEVNPLNFNVGVDQQTTVNSHTK
NT seq
7287 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactctttaacgtttagtttatcacgaatccattatcttgttataaatttg
agtaagaagaacttcaagcaaacaagtcaagagttgtcacagattgtcaatcactatggc
ttggaagcagaaaatcagttgctgaggtctttgcttacggaggcggcaaagacttcctgg
gatacggatcgcacaggacctgcagtcaacagcattcatgcgtctctgctggctcagtat
ttgggttcgttgttgagccatcccgcgaagtcaactgtcgtctgtcgagctgtggacagc
cccaatcgttctgtgcagaagattttaaaaccttctaacactttactcaatcgtctttca
agattgttgaagttaacaactgccgaagatgtcaccttatcgttggtgttgaggcgatat
tcgtccaagaccgagatagcagcgttcgcaaaacaacatcttaagaagcgatttttggat
ctcgtacagtgttatttggatgctgagcatggtcatcaggctgagcgtgcaggtcttcag
gaatgcagccctgaagttttgcaaactctcctaattaacctcgcgtacgaaaactttcgt
cttgctccggtaacaaaagaattattcgtaaaacgtttacgtgttgacttccctcgagaa
gtcgtaccgatagtgttagcaccactgctttatcccgacgatacacaaactccattagaa
gaaatgagcacggccgacgatatggcggtcgcaatgatggacaactcacttgcggaaatc
attcgcgacatggggtacggctttaccgcatcatttgaagaatgcaagaacagcatgttg
aactttggagcgcgagagcctaccgcgatagacattgcgcgtataatatctatgatggtg
cgctaccataccacaatgcccgacgggccgcccattcagacaccaggaaacttttggacg
aatcacgaagcaaagaaagaaggaatcactcatggacatggagaaacctggaatgcagag
atatttgtacagacactgaaagagctggcatctaacttgaactggaaagaggtcatatta
caactggaccatccagaattcattgtaccagacagacaaggattgagcctattgttttcc
atcttgcgtttaggtttacagagtgcaggctatccatccaacatattccctgtggaatat
ctatgccgcaggtggaccaacctggaaggacaaatgagcttgattactaatatattgaaa
catccagatatatttagcctcgctgattacccattccatccggtatcaattgatatactc
aagtccttgccagaaactgataacaaggaaatagccacttggcggtgtctgtacctagta
gagttgctgttgtatgcatctgagcgaggctactatatgcaagttcacgagctgttcaag
tttcctttacagcattgccctgacgttttgatgctcgccttattgcaaatcaatgcaccg
atcactgtatttcaacaggaattgttgtctaccttgataccaatatttttaggcaatcat
cccaattctggaattattttgcaacatgcgtggcattcacagaatccgaacataaaacca
attatcatgcacgcaatggcagaatggtacatacgtggagacagtgatcaatccaaatta
tcgagaatcttggatgtcgctcaagacttgaaagctttatcgctgctactgaatgtacag
tctttccccttcgttattgatttagcttgcctcgcatcaagaagggagtaccttaaattg
gataagtggttaactgacaaaatacgagaccacggtgaatcttttgtctctgctatggtt
aaatttttgcagcgaagatgtccaccagtgatggggaaaccagcagaagagcagttgccg
aaagccgctcagttgccaccggaaactattggcaccatgctgacatgtctgcagctatgc
gcccctaacgtcgttcaggaactacaggaagcgatctataatgtggtagcaacctgccag
gctttaataattaataaaacaagacaaacaatggcgggaatcgctcggccccatactaga
gtaattgaaacaccgttcaaccctgcagctttgggagggcaacttttcactccgcatgtc
gattcgatagccaatcttacaccgaatgtcgctaatatgactttaggcgcaccagtaaac
accgcattcgcaatgcctggaactttagggcctttggtgccacccccagggtctccttcc
cgattgctaggaccaggtcccaatagcccctaccctatgatggcaattccgcacaatccc
aacattcccaatatgggtgctttgcgaatggcgcaaatgccgccaatggacaaattccgt
ttaccggatcagatccatttccctgaacttatgcacaatgtttcaaaagaaattgaggat
gaggcaaatgggtattttcagagaatatacaaccatcctcctcaccctactctatctata
gatgaggttctagagatgcttaaaaagttccaagattcacctaataaaagagagcgtgaa
gtattttcatgtatgctcagaaacttgtttgaggaatacaaattcttcccacaatatcct
gacaaagaacttcatattaccgctcaattatttggtggtatcattgaaaagggtcttgtt
ccaacttacgtatccttgggtttagccttgcggtttgttttggatgcgcttcggaagccg
gagggctctaaaatgtattactttggtatagcagcgttggatagattcaaatcacgttta
aaggactaccacaaatattgtgagcatgtccgtgctataccacattttagtgaattccct
ccgcatctgattgagtatatcgaatatggactgcagagtcaagagccgcctacaaagcct
cagggtccagtgttgcccgccactctggccgctatgttgaatcaaaatactgttgtcaca
gtgtccgcaccatacaggaccgtggtaggtgccccgacccccatgagcgtgatatccaaa
gtggcgaactgcgtggccggcggaatcggcagtcggccgtccatcgccatcgctaccaac
atcgacacgctgctaacagccacagatagggaagagaagattaacgcgcccccagaagct
atacaagataaaaccgcgttcattttcaataacttgagccaactcaatcttcaaactaaa
tgcgaagagcttaaagaaatcttaaccgaagagtactatccttggctttcacaataccta
gttatgaaacgggcatccattgaatttaactttcatgccttgtattctaatttccttgac
gttcttaaggcgcgagaggttaataggcttgttataattgaaacttatcgaaatattaaa
gtgttgttgcgttccgacaaaagcatagccaactttagtgaccgatctttgctcaaaaat
ctcggccattggttgggaatgctcaccctggctcgcaatcaaccaattcttctcgttgat
atcgaccttaaagcacttttacttgaagcttatcataaaggccaacaagaactgttatac
gtcgtacccttcgtcgccaaagttctggagtcgactgcaaggagtcttgcatttaaacca
ccgaacccctggaccatgggattaatgaacgtattagccgaacttcatcaagaacctgat
ttgaagttgaacttaaagtttgaaatagaagtgctttgtaaaaacttaagtatagatata
tcagaattaaaacctactctgtaccttaaagatcctgagaagcataggcttattgaattc
caactttctcagccaaaagttaataaggaacctgtagctgttgttcctataaatcaagct
attgtacaagctccacagatgcaaatgatgccgcctcagcctactatgattcctattgaa
gaaatgacgttaagtgtaccacctcctcctcttggcatgtgtcccgatcctaccttaatg
ggaatccttggaatgccagagccccgattcaattacttggacgtaaatgtcacttcaaca
tcagcatttggacaaaaaatttgtttcaatcatcacatactcttgttccaaaactatccc
catttaaaacagttcgttaaacctgctatcgaaaggtctattcaagagtggattcaccca
gtagttgataggtcaattaaatatgctcttactacttgtgagcagattattcggaaagat
ttcgccctagatccagatgaggggcgcatgcgcacctgtgcgcatcacatgatgcgcaac
ctgactgcgggcatggcgatgatcacgtgccgggagcagatcgtcagcaccatcagcacg
aacctgaaagcagcattcctgacagcacttatccctgcaaatccacaacagcttgtgttc
cagaaggatatagttgaaagtgcagcagctgttttagcaacagaaaacatggaattagct
tgtgcctttattcagaaaacagccgttgagaaggcattgcctgaacttgataaacgtcta
atgaacgactatgaaattagaaaacaggcaagaatcgaaaaccgacgttactacgacccg
atagtacttacataccaaaccgaaaatcttcccgaaagagtgagactgcgaatgggagga
cccatggatatgcagatttcggtatatgaagaatttgcttgcaacattcctggctttatg
cccttgagagatgctggcatgttcatcccaaagccctcccaagagcaaattcctcagcta
acatttagccaagttataaacccaactcaagtgtatggggcagatgagatgggaggtttg
atatcagcagctgagatgttcctgtccagtgtattaaatacacagagtttcccagttcaa
gctaccaacatgcacaccctgctggaatgtcttgtaattgcaagaagaaaccgtgatatt
gtatccggttgtaacttactacagcgggctgtagaaggcctactcgatggccacattatt
cagtctggagtcaacgcagaacatgttgatttgatgacacgatatagagatattcacctt
cgagtgctcaagctgttggaagatgcgagggtgtacggacacgtgtggacgacgaagcag
atcacctgctgtctaaccgagtgcagagatgaactcagatacaacattgaagctgtcgat
tgtctcatccgaaaccacctcattaatatgccacaatatgacttagccctggctcatctg
atggataatggcaataattacgttgctgtagccttcgcaatgcagttggtgcaactgtat
ctagttgacgataggaataacatcttcgtgaatgagtctgatttataccatacgaccgag
accttggtacgtatgatggcgcacccacaacagccgccaccagaaggtttggcgacgttg
atcgagacgttgagaatcaatcaagatcctagcgcttatcttggagagagaatgcctctt
gggcctacagcgcatatacattctggcattttacaagtccggaaccgcgaatacgatgat
cctcctggccttcaagagaagacggacaatgtgcttcacgagtggcgtaccctgcttcaa
agtccattaactgacgtcgaattcagtcagaacttcaacatatatgttcatcgcatgaac
atgaatggaatactgaaatctgatgacatgattaccagattcttccgtatcgctacacag
atgtgtatccaaaatgtataccaacaactgaatgaagaaagggcaaatccgccaccagtt
cctccaaaacgggagaaatactacgtaatgtgtgactctttcattaaactggtcacttta
cttatcaagaacaccgctgatgctggtaatccaaccccgaaactcaatcttttgaacaag
atcctggggataatagctggatgcctgttgcaagatcacgaggagcctgggaataacttc
caacagctgccgtatcaccgcttgctactgattctcttcctcgacatgaatatggctgaa
ccagtcttagaatctatgaactatcaggttctcactgcgttctgtcatacgctgcgcata
attcgtcctagcgtggcccctggtttctgttacgcctggctcgaattcctctcacaccgt
tcctttataaatagagtgctcgcagtcactccacaacagaagttataccattgtttcatc
cagggctggggaatgtattcaacgctgctcatagatctattcaaattcctggacccattc
ttaaggaacacagaactaggggcccccgtcatggcgctttacaaggggacacttaaagtg
ctccttgttttgcttcatgacttccctgaattcctttgcgattatcactttggtttctgt
gatgaaataccccccaactgtatacaaatgaggaatctgatactatcggccttcccccgg
aatatgagactgcccgaccctttcacgcccaatctgaaagtggacctgctcgccgagata
gcgctatcgccccgagccgttataaactacgcaacgattatccccataacacaattcaag
aaagatctagatgcctatctcaaagccaggaccccggttactttcctctctgagctaaga
agcaatatgcagtttccgcaggtgggaagcgaacccgcccgccgctacaacacgcagctc
ttgaacgctgtggtactctacgtcggtgctcaggcgatcgcctacatcagatccaaggga
caaacgccaaatatgactacaatcgcccactcctcacatatggatatattccagaacttc
acagtcgactttgattatgaaggacgttatctgttcttcaacgcaatcgccaatcagttg
cgctacccgaacagtcacacgcactacttcagttgctgtctcttatatctgttcgcggag
gccaactccgaggctatacaagaacaaataacaaggatgttactcgagaggctgattgtg
aacagacctcacccatggggactcctgataaccttcatcgaactgatcaagaacccagtc
tacaaattctggtcacatgagtttgtacattgcgcgcccgaaatcgagaagcttgccaag
cgccgcaacgccacaagtgagcaccagccagccctccacctcgtccgctctgcccaagca
gtggaaccaactgttcaagaagtaaatcctttaaacttcaatgttggtgtggatcagcag
actacggttaactcgcatactaagtga
DBGET
integrated database retrieval system
