Paenibacillus polymyxa Sb3-1: RE92_18705
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Entry
RE92_18705 CDS
T03812
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ppoy
Paenibacillus polymyxa Sb3-1
Pathway
ppoy00040
Pentose and glucuronate interconversions
ppoy01100
Metabolic pathways
ppoy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppoy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
RE92_18705
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RE92_18705
Enzymes [BR:
ppoy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
RE92_18705
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Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
AJE52925
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Position
complement(4238772..4240055)
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AA seq
427 aa
AA seq
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MKKRFSLGIAAVLLFATLAPMGAPAHAASDIGKETLGSKNGWAAFSTGTTGGATATSSNT
FTVTNRKQLVDALGKSSNTTPKIIYVKGTINANVDDNNKPLGLNDYKDSKYDFNAYLKAY
DPSTWGKKVPSGTLEDARKASQKNQASRIVIEIPSNTTIVGLGNNAVINGANFQLKKGTD
NVIIRNIEFQDAYDYFPQWDPTDGSTGNWNSEYDSITINGATHVWVDHNTFNDGAHPDSG
NGTFYGQEYQHHDGLLDVINQGDLVTISYNHFYDHDKTSIIGNSDSKTADEGALRVTLHH
NYYENTVQRTPRVRYGQVHLYNNYYTGDVKRSEYPTLYIWGAGKASKIFAENNVIDVAGL
SAAKIVTVFGGTALSDTGTLLNGQAVNAGSSAGLSSSVGWKPSLNDKISPSASVKTEVTS
QAGSGKL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagagattttcactcggaatcgcagccgtgttactgttcgctactctggctcct
atgggtgcacctgctcatgcagccagcgatattggcaaggagacactcggcagcaaaaac
ggctgggccgccttttctactggcacaacaggtggagctactgctacttcctccaatact
ttcaccgtaacgaaccgtaaacaacttgtcgatgcgttaggcaagagcagcaacactaca
cctaaaatcatttatgtcaaaggtacaatcaatgctaacgtcgatgacaataataaacca
ttaggattgaacgattacaaggactctaagtatgatttcaatgcgtatctcaaggcgtat
gatccgtctacatgggggaaaaaggttccttctggtacattggaagatgcacgtaaggca
tcacagaagaatcaagccagtcgtatcgttattgaaattccatccaatacaacgattgtc
ggtctgggcaacaatgccgtcattaatggcgcaaacttccaattaaaaaagggtacagac
aacgtcattatccgtaatattgagtttcaggatgcctacgattatttcccacaatgggac
ccaactgatggcagtacaggcaattggaattcagaatatgacagcattacaattaacgga
gccacgcatgtatgggtggatcacaatacgttcaatgacggggctcaccccgatagcgga
aacggcaccttctacggtcaagaataccaacatcatgatggactgctcgatgtgattaac
caaggtgatctggttaccatttcatacaatcacttttacgatcatgacaaaacatccatt
atcggcaacagcgacagcaaaacagcggatgaaggggctttacgtgtaaccctgcatcac
aattattatgagaatacagtacaacgcacaccgcgcgtacgttatggacaagtccatcta
tataacaattactatacaggtgatgtaaaacgctctgaataccctacactgtatatatgg
ggcgcgggcaaagcctctaaaatctttgctgaaaacaatgtcattgacgttgcgggactg
tccgcagccaaaattgtgactgtttttggtggaactgccctgtcagacactggcacactt
ctgaatggacaggccgtaaacgcaggctccagcgcggggcttagctcctctgtaggctgg
aagccatccttgaacgataaaatttccccatccgccagcgtgaagacagaagtcacttcc
caagccggttccggcaagttgtaa
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