Physcomitrium patens (spreading earthmoss): 112273562
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Entry
112273562 CDS
T01041
Name
(RefSeq) ATP-dependent DNA helicase Q-like SIM isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppp03032
]
112273562
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112273562
Enzymes [BR:
ppp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
112273562
DNA replication proteins [BR:
ppp03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
112273562
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
112273562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
CCER1
UBA
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
112273562
NCBI-ProteinID:
XP_024358254
LinkDB
All DBs
Position
20:complement(1163587..1172226)
Genome browser
AA seq
1155 aa
AA seq
DB search
MEAARLTQDEMVAQLLSMGFDYYLALEVISNPNLGSLNDMVDFLLTEGSSRYVECCLGKR
KNVSNDLEEIDRKNIVNPNDGSCNLWHFKEEVKENIRAARFVCSNVKVEPMETSSILCRT
DAMKTSTEFCGDATEQMRENGGTNNQGFWVQEGAWGGFSDEVFDEEEPPLHQSDAAEENI
ITHVVVPSVPRKKLVIGHSSEVVCKGTTTARSRTSVLEKYSTDIASKEADMQREEMLIRC
QKAMRVKGELVDAESAVDVKPVIENKHVLNFGGKLNPAVDTGSTGAKAEPLETEDVKPRG
SELPRNRCREEQENCTQVKRKRGSILDPDGLREGGPSKTYIPSKLKGVTIPKVEDWEKAA
VTALRRYFGYQELKSFQRIAIEAWADNRDCFVLAATGSGKSLCFQLPALMTGKVVVVVSP
LISLMHDQCLQLARQGVSACFLGSGQVDKTIELKAMAGIYNIVYVCPETLPRCVGRLESC
LQSLARGKGIALFAVDEAHCISKWGHDFRPTYRQLSMLRDKFKVGVIPGLNQQIPIMALT
ATATPFVREDILNSLGIAAGNPRIVLTTFFRPNLYFSVNHSKTTKVTSYENDFASLINLY
TRNGDRCQRVASTSKTSLRKESNRVSSKDDNYNLRMGLTDLMDSTQSNEWLNANKNKVLG
RNLTHNDGIEDLVILSDDYEDDDEDDEDDDDDDDDDDDDYSSAEGDAIKDNDCDGSRLTT
QFLEDEDERLGGDCFVECGEFRGRAAALRDSAGQDNGKATELGEGPTIVYMPTRKETETL
AKFLCRHGVKAAAYHAKLPRTHLRQVHEGFHGDNLQVVVATIAFGMGIDKPNVRRVIHYG
WPQSLEAYYQEAGRAGRDGARSDCELFVDMTVLPSLLPSRRDPAQTKHSLEMLSQCFRYA
IQQDCCRVHTILKYFGEVLEGGLCNMCDVCLKGPPPAQNLTREAVLLLTAIAASQTGGTA
LGASVQPRERAPRGKGMTGRAGRAGRTSSTSSVAPKGLSIKDIVEQLEKQDPSKDRLWWR
GFVRILADRGFIQNAASTATNKLVVPTIKYPLLTPKGLELLRTPNITIASQHVHRLLVYL
EGDMIQASKMPRNHRTSEESREWGRGWADPEIRRQRLSKRGRGRSRRRGKSRQRQPKADS
TTVRSRLANKLGLKR
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgcacgccttacacaggacgaaatggttgctcagctattgtcaatgggattt
gattattatttggcgctggaggtaataagcaacccaaatctgggctctcttaatgacatg
gtggattttttattaactgaaggttcgagccgctatgtggagtgttgcctagggaaacgt
aagaatgtctccaacgatttggaagagatcgacagaaagaatatagtcaaccccaatgat
gggtcctgcaatctatggcatttcaaagaggaggtgaaagaaaacatcagggcagcacgt
tttgtatgttcgaacgtaaaagtggagcctatggaaacttcttcgatcctgtgtaggaca
gacgccatgaaaacatcaacagaattttgcggtgatgcaacggaacagatgagagaaaat
ggtggtactaacaatcaggggttctgggtgcaagaaggtgcatggggagggttcagtgac
gaggtttttgatgaagaagaacctcctcttcatcaaagtgatgcagctgaggaaaacatc
atcactcatgttgttgttccaagcgtaccgagaaagaagttggtcatcgggcattcctct
gaagtagtgtgtaaggggacaacgactgcaagaagtcgaacaagtgttttagagaagtac
agcacagatattgcatcaaaagaagctgacatgcaacgagaagagatgttgatcaggtgt
cagaaagctatgcgtgtcaaaggagaacttgtggatgctgaatcagcagtggacgtgaaa
cccgtcatagagaacaagcatgttttgaattttggaggtaaactgaatccagccgttgac
acaggatctacgggggctaaagctgaacctttggagaccgaagatgtgaagccacgaggt
tcggaattacccagaaaccgttgcagagaagaacaggaaaactgtactcaggtgaagaga
aagcgaggatctatacttgatccagatggtctaagagagggtggtccttccaaaacctac
atacctagcaagttgaaaggtgttaccatccctaaggtcgaggattgggagaaagcagct
gttacagctttacggaggtattttggctatcaggagctaaaaagtttccaacgaattgca
attgaagcatgggccgataatcgtgactgcttcgttcttgctgctaccggctctgggaag
tcattatgctttcagctcccagcgttgatgaccgggaaggtagttgtagtggtttcccca
cttatcagccttatgcacgaccagtgcttacagctagcgcggcaaggtgtgtctgcttgc
tttcttggatctggccaagttgacaagacaattgagcttaaagccatggctggaatttat
aacattgtctacgtctgcccggaaactcttccaaggtgtgtgggcaggctggaaagttgt
ttgcagagccttgctcggggtaaaggcattgctctctttgcagtggacgaggcacactgc
atttccaaatggggtcacgactttcgtccaacctacaggcagttatctatgctgagggat
aaatttaaggtcggcgtcattccgggactgaatcaacagatacccataatggctctgact
gccaccgcaactccttttgtgcgggaggatatcctaaactccttaggaatagctgctgga
aatccaagaattgtgctcactacctttttcagacctaatctttacttttctgtaaaccac
agtaaaacaacaaaggtaacatcatatgaaaatgattttgcatctcttatcaatctctac
accaggaacggcgatagatgtcagcgagtagcttcgacatcaaaaacaagtttgcgcaaa
gagagtaacagagtaagctcaaaggatgataactacaatctgagaatgggtcttactgat
ctaatggacagtacacaaagtaatgaatggcttaatgctaataaaaacaaggtccttgga
agaaatttgactcataacgatggcatagaggatttagttatcttgtctgacgactacgaa
gacgacgacgaagacgacgaagacgacgacgatgacgacgacgacgacgatgatgattat
tcaagtgcggagggtgatgcaattaaggacaatgactgtgatggttctcgtctaacaact
cagttcttggaggacgaagacgagagacttggcggtgattgttttgttgagtgtggagaa
tttagaggtcgtgctgctgcacttagggattctgctggtcaagacaatggaaaggcaaca
gaactgggggaaggccccaccattgtttacatgcctacaagaaaggaaactgagactctt
gcaaagtttctttgcagacatggtgtcaaagctgctgcttatcatgctaagttacctagg
acccatttgagacaagtacacgagggatttcatggagataatttgcaggttgttgttgct
actattgcatttggaatgggaatcgacaagccaaatgtgagacgtgtgatccattatggc
tggcctcagagtttggaagcatactaccaagaggcaggtcgagctggtagagatggtgct
cgttcagattgtgaactatttgttgacatgactgttctgccttcattgctgcccagccgc
cgagatcctgcacaaacgaagcattcacttgaaatgctctcgcaatgtttcaggtatgcc
attcaacaagattgctgcagagtgcatacgatacttaaatacttcggtgaagttcttgag
ggtggtctatgcaacatgtgtgatgtatgcctcaagggtccaccacctgctcaaaatctg
actagagaagccgtgctgctactgacagcaattgctgcctctcagacgggaggtactgcc
ttaggagctagtgtgcaaccaagagagagagcaccaagaggaaaagggatgacaggcagg
gcaggacgagcaggaaggacaagtagtacttcatcagtagcacctaaaggactgtctata
aaagacattgtggaacaattggaaaaacaggatccatcgaaggatagattatggtggagg
ggctttgttcgtatactggctgaccgtggatttatccagaatgccgcgtcaacagccaca
aataaattggtagtgcccacaattaaataccctctcctcactcccaagggacttgagctc
ctacgaacacccaacataacaatagcttcacaacatgtacatcgtcttttggtttactta
gaaggtgacatgattcaagcttcgaaaatgccaaggaaccatagaacgtcagaagaatcg
agggaatggggaagaggatgggctgacccggagatacggcggcagcgtctcagcaagcgt
ggcaggggtcggagtcgtaggaggggtaagtctcgacagaggcagccaaaagctgactct
acgactgtgcggagtcgtcttgcaaataagttgggtctcaagagatga
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