Physcomitrium patens (spreading earthmoss): 112275228
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Entry
112275228 CDS
T01041
Name
(RefSeq) WD repeat-containing protein PCN-like
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112275228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppp03009
]
112275228
Ribosome biogenesis [BR:
ppp03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
112275228
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4_WD40
WD40
Motif
Other DBs
NCBI-GeneID:
112275228
NCBI-ProteinID:
XP_024361173
LinkDB
All DBs
Position
22:complement(9409325..9414816)
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AA seq
898 aa
AA seq
DB search
MLEVHRCRQIEWSPSAVVALATSINGAAVAVARENGAIEIWSVAAGSLGWHCQLIIPGRQ
GAAISSLLWCQSLEEDESPLGRLFSAGLDGLVTEWDLQTLQPRAVVESMGGSIWHLAAEH
IDAVVPKGLNGSSDNRIRGSEENDSDDEGNSSSSDSDDEVERKPQRVALACEDGVVRIFE
VGNSKDGLVYRKSFPRVKGRILSVAWSWNGERLVAGGSDGCIRCWDIANTREIYRITAGI
GGKGRDSDLCIWSLLVLRNGDIVSGDSSGSTQFWDGQLGTLLQSQTRHGADVLALAASRN
NVFAAGADGKVVLFHKVGESQRLDASSSDALDVARGVSGEKWVYVGSKRTHTHDVRALTI
ATPIVSSPVPADKSGTKMDNGEKNKVKRRRTKENPNLAPNDHKKWARAHTEMLISGGNDA
KLFTYPANGFLSFHPHDVCPCPERPFIQLVEHSSLIGGTLMMAQHSNRVDIWKIYNENSV
AIGSANGVYSQNGHSVLGKRKWDGGADSGSDSKALILHSNGSAHTQNGRRKSFPVESINS
PRYSQGKASGTPPALLATIKINSSEHIVCSAISGKGDLVAFADSQRPRLYVLERKGASEL
FQIKRKKLPAVLQAAHCMVFNADSSRLIVAGPQGFIWVMDSSSAELVHTFHVPSHNNVGW
ANGIVKIMCTSPDGQWLAAASSTGHIAVFNLEVMRHQWTVPVLDGTPATAMVFYPGNNNV
LIVSSAANQIHALDVEVRAPGQWSRRNGARIAKKLQDFPGTIIGLSLPSHPKSTSIIAYS
SSAMCHIDFSQPIGDEAGPMDEESGKGPKAISNGKVHEGANSNGILVEGSSRTSSVRESK
TLVTSNGSESKSLVVVNMKNPVLFLGHTGRNSVLIVEKPWLEVLRQFPAPVSRHVYGS
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgctggaagtgcacagatgccgacagattgagtggtccccaagcgctgtagttgcactt
gccaccagcataaatggggctgctgtagctgttgctcgggagaacggtgctatagagatc
tggagtgttgccgctgggtccctaggatggcattgccaattgatcatcccagggagacaa
ggtgcagctatttcgtccttgttatggtgccagtccctggaggaggatgagtcccctctg
ggcagattgttctccgcagggttggatggcttggtcactgagtgggatcttcaaactctc
caaccgagggcggtcgtggagtctatgggagggtctatatggcatttggctgctgagcac
attgacgcggtagttccgaagggcttgaatggaagctccgacaatagaattcggggaagt
gaggagaatgacagtgacgatgagggaaacagtagcagcagtgatagtgatgacgaggtt
gaaaggaaaccgcaaagagtagcgctagcttgtgaagatggtgttgtaagaatatttgaa
gtgggcaactcaaaggatggccttgtctatcggaagtcattccctcgagtgaaagggcga
attttgagtgtcgcatggtcatggaatggtgaaaggctagtcgcaggtggttctgatggg
tgcataaggtgctgggatattgctaatactagagaaatttatcgaatcactgctggcatc
ggaggcaaagggagggattctgatttgtgtatttggtccttgttggttctaaggaatgga
gacattgttagtggtgatagcagtgggagcactcagttttgggacggacaacttggcaca
ctgttgcaatctcagactcggcacggtgctgatgtgttggctttagctgcctctcgtaac
aatgtttttgccgcaggagctgatggaaaggtggtactatttcacaaagtgggtgagagt
caacggctggatgcttcgtcatcagacgctcttgacgttgcaagaggtgtttcgggtgag
aaatgggtctatgtgggcagcaagcgaacacatacccacgacgtgagggccctcaccatc
gccactcctatcgtgtcttcgcctgtacctgcagataagtctggaacgaagatggacaat
ggggaaaaaaacaaagtgaaaaggcggcgaaccaaagaaaatccaaatttagctccaaat
gatcacaagaaatgggcccgtgcacacactgaaatgttaatttctggtggtaacgacgca
aaactcttcacatatcctgcgaatggatttctttctttccatcctcacgatgtatgtcct
tgtcctgaaaggcccttcatccagcttgtggagcattcctcccttattggaggtactttg
atgatggctcagcattccaatagagttgatatttggaagatttacaacgaaaactcagta
gctattggatctgcaaatggtgtttacagtcaaaatggacattccgtcttgggaaagcgg
aagtgggatggaggtgctgattcaggtagtgattctaaagcattgatactgcatagcaat
gggtctgctcacacacagaatggacgaagaaagtcgttcccggtagagtctattaattcc
cctcgttattctcaaggaaaagcctctggcacgccaccagcgcttctagctacgatcaag
ataaattcgagtgagcacattgtatgcagtgctatatcaggcaaaggtgacctagttgca
ttcgccgatagccagaggccccgtctctacgtgctagagcgtaagggggctagtgaattg
tttcaaatcaaaaggaagaagcttcctgcggttttacaagctgcccactgcatggttttc
aatgcggattccagccgtttgattgtggcaggacctcaagggtttatttgggttatggat
tcaagcagtgcagaactggtccatacttttcacgttccttcgcataacaatgttggatgg
gcgaatgggattgtaaaaataatgtgcactagtcctgatgggcaatggctagctgctgca
tcgagcacagggcacatcgctgttttcaatttggaagttatgaggcaccagtggacagta
ccagttcttgatggaacccctgcaacagctatggtattttatccagggaataacaatgtt
cttattgtgagcagtgctgctaatcagattcacgctctagacgtcgaagtgagggcccct
ggacagtggtcacgacgcaatggagcacgtattgcaaagaaattgcaggactttccgggt
acaatcatcgggctttcgctaccctcacatccgaagtctacatctatcattgcttatagc
tccagtgcaatgtgtcatatcgacttcagccaaccaattggagatgaagcaggcccaatg
gatgaagagtccggtaaaggtccaaaagcaattagtaatggcaaagtgcatgaaggtgcg
aattcgaatggtatacttgtggaaggtagttctaggactagtagtgttagggagagcaag
accttggtgaccagcaacggtagcgagagcaagagcttggtggtggtgaatatgaagaac
ccagttttgtttttaggacacactgggcgtaattccgtgctgattgtagagaaaccttgg
ttagaagttttacggcaatttcctgcccctgtctctagacatgtttatggcagttga
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