Physcomitrium patens (spreading earthmoss): 112278990
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Entry
112278990 CDS
T01041
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppp03400
]
112278990
Enzymes [BR:
ppp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
112278990
DNA repair and recombination proteins [BR:
ppp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
112278990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ResIII
DExH14_plug
Helicase_C
AAA_22
AAA_30
AAA_19
DEXQc_Suv3
Helicase_PWI
Gb3_synth
Motif
Other DBs
NCBI-GeneID:
112278990
NCBI-ProteinID:
XP_024368754
UniProt:
A0A2K1L0X0
LinkDB
All DBs
Position
2:6784707..6803532
Genome browser
AA seq
2124 aa
AA seq
DB search
MAIIQKSRLSTVVRSIGNPGTVLDVDKLYLERKRILEQRRQSRNGVAAVGSSELARRLVP
SWDEAPAKIRHAYEQFLVAVKELIDGEVPPDELQQSASLIYDSIHDLDGASSGPVYNQKR
EKLANIFGQTFPKDQLLKVADLANQIHVWQLASNVNQKSSSKKPGNILDEFGSNLSFQVP
AASSDEFEDISDDDEDDWDDLGINSSLEDTAIVASSAVSQQTDGSASMPHKGEWPSSTSN
GVGGITLRWYYEACEQASHGQFSGSELAMALYRVLDSERSEDEIAGELFDLVGDGGFELI
QELLQHRKEIVELVHKAISICKSDKASSGPTPRMPSYGTQVSVHSDLDKQLDKLRKKEEK
KQAKRVANGDSDAALEWLSGLGGFYALVEASEKGSGVIDGLVGKGDDTLLTGAILPQGSI
RKVFKGYEEVRVPAIVTAALKPNEKLIKIGELPNFAQLAFEGYKTLNRIQSRIFPTAFNS
NENILVCAPTGAGKTNIAMISVLHEIGQNMKYGVLQKNDFKIVYVAPMKALAAEMTQAFS
RRLAALDVVVKELTGDMQLTKRELEETQMIVTTPEKWDVITRKSSDMALATLVKLLIIDE
VHLLNDDRGPVIETLVARTLRQVESTQSMIRIVGLSATLPNYLEVAQFLRVNAETGLFYF
DASYRPVPLSQQYIGITEQNFVLRNQLMNEVCYTKVMEAIKRGQQAMVFVHSRKDTVKSA
RSLVEIAQRNNQLSLLTDVSELPLYGMMKKEVTKSRNRELVELFGSAFGVHHAGMLRSDR
NLTERLFSEGMIKVLVCTATLAWGVNLPAHMVVIKGTQLYDPKAGGWRELGMLDVMQIFG
RAGRPQFDTSGEGIIITTHNKLSHYLRLLTHQLPIESQFVTSLKDNLNAEVVLGTVTNVK
EAIAWLGYTYLFVRMLKNPLVYGMSWEEAVMDPGLLAKRKALITDAARELDKAKMMRFDE
KSGNLYVTDLGRVASHFYIQYTSVETYNEMLKRHMNEAELIHMVAHSSEFENIMVREEEQ
QELAQLVRSHCPFEVKGGPEDKYGKINILIQVYLSRGFVDGFSLVADSSYINASLGRIMR
ALFEICLRRSWVTMTTLLLEFCKAVDRRVWPHQHPLRQFDAILSSDILYKLESRDATMER
LYNMDDKQIGELIRHPHGGKLVVQCLRYFPRVELSANISPITRTVLQVALTITIPDDFDW
KDKVHGLSERWWIWVEDSDNEHIYHSELLSMSRKTVKEKKIILSFTIPIFEPLPSQYYIR
AISDKWLHAEALHTVSFQHLILPEQHPPHTELLDLRPLPLAALGNKEYEKLYNFTHFNPI
QTQAFHTLYHTDNNVLLGAPTGSGKTISSELAIMRLFNTYPDMKVIYIAPLKALVRERMD
GWGKGFAHALNKKLVELTGDFTPDMRALLAADIIISTPEKWDGISRNWHNRSYVTKVGLM
VIDEIHLLGADRGPILEVIVSRMRYISSQTGAPVRFIGLSTALANARDLANWLGIEEVGL
YNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPTYAAITTHSPFKPVLIFVSSRRQTRL
TALDLIQYASADERPRQFVNMTDDEMDMVLSQVQDENLKHTLQFGVGLHHAGLNDRDRSL
VEELFTNTKIQILVCTSTLAWGVNLPAHLVVIKGTEFFDGKTKRYVDFPITDVLQMMGRA
GRPQYDQHGKAVILVHDPKKSFYKKFLYEPFPVESMLTHHLHDHFNAEVVAGTISSKQDA
IDYLTWTYLFRRLVKNPSFYDLGDTTSASINAYLSGLVNSTLQALEDGGCLRVNEDDTVE
PLVMGSIASQYYLHYTTVALFSANIRADTSLEALLQVLSGAAEFDELPVRHNEDKVNEGL
AKEVRWPVDMRALDDPHVKTNLLLQAHFSRIDLPVSDYVTDTKSVLDQSIRVLQAMVDVA
ANGGWLETALSTMHLLQMIMQGLWWEKDDRLALKMLPYVNSDVLSVFKDRGIVSGNDLLS
STADQVRGALRTVIGPPQVTEFLNVWMRLPRTEVKWKLEPSGGDKSKEWVLRVEVSRRVL
KRMPNARAYVPHFPKVKDEGWWLVAGNPKTREVYALKRVTFLEHLRSNLVLPKHLKPESE
PIKLYLVSDCYVGLDQEFEIRRAC
NT seq
6375 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcatacagaagtcacgactgagcaccgttgtccgatcaattggtaatccaggg
accgtgcttgatgtcgataagttgtatcttgaaagaaaacgcattctcgaacagagacga
cagtcgaggaatggagttgctgctgtcggctcctctgaattagctcgaaggctggttccc
tcgtgggatgaagctccagcgaaaattcgacacgcttacgagcagttcttggtggctgtt
aaggagttgatagatggcgaggttcctcccgatgaattgcagcaatctgcaagtctaata
tatgattcaattcatgatctagacggtgcaagttcagggcctgtatataatcagaaacga
gaaaagctagcaaatatattcggccaaacattcccaaaggatcaattattgaaagttgca
gatctggctaatcagatacacgtatggcagctggcttcaaatgtcaatcagaagtcgtcc
agcaagaaacctggaaatattctagatgagtttggttcaaacttgagctttcaagttcca
gctgctagttctgacgaattcgaggatattagtgatgacgatgaagacgattgggatgat
cttgggattaattctagtctggaagatactgcaattgtcgcttcaagtgctgtatcacag
caaacagatggctcagccagcatgcctcacaaaggagaatggccgtcttctaccagtaat
ggggtgggtggaattaccctaagatggtactatgaagcgtgtgagcaagcaagtcatggt
caattttccgggtctgagttggctatggctctttatcgcgtccttgactctgaacggtca
gaagatgagattgcaggagaattgttcgatcttgttggcgacggaggatttgaactaatt
caagagcttttgcagcatcgcaaggagattgtggagcttgtacataaagctatttccatc
tgcaagtcagacaaagctagttctggtccaacgcctcgcatgcccagctatggcacgcag
gtgagtgttcattccgacttagataaacagctagataagctccgcaaaaaggaagagaag
aaacaagccaaacgagtcgctaatggggatagcgatgcagcacttgagtggttatcgggg
ttaggaggtttctatgctttggtggaggccagtgagaaaggaagtggcgtgatcgacggt
ttggtaggcaaaggggatgatacgctgttgactggggcaattctaccgcaaggttctatt
cggaaagtattcaaaggctacgaggaagtacgagttccagcaatagtcaccgctgcactg
aaaccaaacgagaagctgatcaaaataggagaattaccgaattttgcacaacttgcattc
gaaggatacaagacactcaatcgaatacaaagtcgtatatttcctacagccttcaatagt
aacgagaacatacttgtttgtgctccaactggtgctggtaaaacgaatatcgccatgatc
tcagtacttcatgagatagggcagaatatgaagtatggcgtgctgcaaaaaaatgatttc
aagattgtttacgtagctcccatgaaggcacttgcagcggagatgacacaagcatttagt
cgcaggctagcagccttggatgtggtcgtgaaagaattaactggagacatgcaattaact
aaacgtgagcttgaagaaactcagatgattgtaactacaccggagaagtgggatgtaatt
acacgtaaaagcagcgatatggcactggctactctggtgaagctattgattattgatgag
gtccatctgttgaatgatgaccgtggtcctgtcattgaaacccttgtggcccgaactctt
cgtcaggtggaatcgacacaaagcatgatccgtattgttggactttcagctactcttcct
aattacttggaggttgcacagtttttgagggtgaatgcagaaacagggctcttctacttc
gatgcaagctaccgtccggtaccactttctcaacagtatattggtatcactgaacagaac
tttgttcttcgcaatcagctcatgaatgaagtctgctatacgaaggtaatggaggcaatc
aagcgtgggcaacaagcaatggttttcgttcattcgcggaaagacacagtgaagtcagcg
cgcagtctggtggagattgctcaacgtaataatcagttgtcactacttaccgacgtctct
gagctcccgttgtatggaatgatgaagaaagaagtgacaaagtcaaggaatcgagagcta
gttgagctatttggttcagcatttggcgtccatcatgctgggatgctaaggtcggaccga
aaccttactgaacgactcttttcagaaggaatgattaaggttttggtttgcacagctacc
cttgcatggggagtgaatcttccagctcatatggttgtaattaagggaacacaactctat
gaccctaaagctggtggttggcgcgagcttggtatgcttgatgttatgcagatatttgga
agagcaggaagaccacagtttgataccagtggtgaaggcattattatcacaacccataat
aaactctctcactatcttcgacttcttactcatcaattgccgattgagagccagtttgtg
acttctttaaaagacaatttgaatgcggaagtggtactagggactgttaccaatgtcaag
gaagcaattgcttggcttggatatacttatctctttgtccgtatgttgaagaatcctctt
gtgtacggcatgtcttgggaagaggctgtgatggatcctgggcttttagcaaaacgcaaa
gcgctcattacagatgctgcacgtgaacttgacaaagcaaaaatgatgcgattcgatgaa
aaaagtgggaacttatatgtaactgatcttggacgggttgctagtcatttctacatacaa
tacactagtgtggagacctacaatgagatgctgaagcgtcatatgaatgaagctgagtta
attcacatggttgctcattcatctgagtttgagaatattatggtaagagaagaggagcag
caagaactggcacagcttgttaggagtcattgccctttcgaagttaaagggggcccagaa
gataaatatgggaagatcaacattctcattcaggtgtatctttctcgagggtttgtggat
ggcttttcccttgtggctgacagttcctatattaacgccagtttaggccgcatcatgcga
gctctgtttgaaatatgtttacgacgaagttgggtgactatgacaacccttctgctagaa
ttttgcaaagcagtcgatcgacgtgtctggcctcatcagcacccacttcgccaattcgat
gctattctatcctcggacattttgtacaaactcgaaagcagagatgcaacaatggagcgt
ttatataatatggatgacaagcaaatcggagaactgattcggcatcctcatggtgggaag
ctagttgtgcagtgtttaagatactttccacgggtagagctttctgccaacatcagccct
attactcggactgtactccaggttgcgttgactatcactataccagatgattttgattgg
aaagataaagttcacggcttgtccgaacgttggtggatatgggttgaggattctgataat
gagcatatttatcattcggaacttctcagcatgagcagaaaaaccgttaaagaaaaaaag
ataattctttccttcactatccccatatttgaacctctgccgagccagtattacattcga
gcgatttcagacaagtggcttcacgctgaagctcttcacacagtctcctttcagcatctt
attctacctgagcaacatcctccacatacggagttgctggacttaaggcctcttcctctg
gcagcacttggcaataaagaatatgagaagctttacaacttcacgcattttaatccgatt
caaacccaggcctttcacacactctatcacacggataacaatgttctgcttggtgctcca
actggtagtggaaagactatttcttcagaactagccattatgcggctttttaatacatat
cctgatatgaaggtcatttacattgctccacttaaggcacttgtcagggagagaatggat
ggctggggaaaaggttttgctcacgctctaaataagaaattggtggagttgacaggagat
tttacacccgatatgagagcactgctcgcagctgatattatcatctcaacgcctgagaag
tgggatggtattagccgtaattggcataaccggagttatgttacaaaggtgggattaatg
gtgatcgatgagattcacctccttggagctgaccgtggacccattctagaggtcattgta
tcccgcatgcgatatatatcttctcagacaggagctcctgttcgcttcatcggattatcc
acagcgcttgctaatgctcgggacttggctaactggcttggaattgaggaagttggtctt
tacaattttaagcccagcgttcggcctgtgccacttgaagttcacattcagggttatcct
gggaagttctattgcccaagaatgaacagcatgaacaagccaacatacgcagcaataaca
acccattctccctttaaaccagttcttatatttgtgtcatctcgtcgtcaaactcgtttg
acagctctggacctcatacagtacgcgtctgccgatgaaagaccacggcagtttgtgaac
atgacagatgatgaaatggatatggttctttcccaagtacaagatgaaaatttaaaacat
actcttcaatttggtgttggactgcatcatgctggtttgaacgatcgagatcgatctctt
gttgaggaactttttaccaacacaaaaattcagatattggtttgtacaagcacactggcg
tggggtgttaatcttccagctcaccttgttgtcataaagggtactgagttcttcgatggc
aagacaaagcgctatgtagactttcctatcacagatgttctccagatgatgggtcgtgct
ggtcgacctcagtatgatcagcatggtaaagccgtcatcttagtacatgatcccaagaaa
agcttttacaagaagtttctgtatgaaccttttccggttgaaagcatgctcacgcaccac
cttcatgatcattttaatgcggaggtggtggctggtacaatatcaagcaagcaagatgcc
atcgattatttgacctggacataccttttccggcgcctggtcaagaacccgagtttttat
gaccttggagataccactagcgcttccatcaatgcatacctatcaggattggtgaacagc
actcttcaagcccttgaagatgggggttgtctaagagtgaacgaggatgacacagtcgaa
ccattagtgatgggtagtattgcatctcagtattacttgcattacacaactgttgcattg
ttcagcgccaatattcgtgcggatacatctcttgaggctcttcttcaagttttgagtgga
gctgcagaatttgacgaattgccagttcggcataatgaggataaagttaatgaggggctt
gcaaaggaagtacgctggcctgttgacatgcgtgcacttgatgatccacacgtgaaaacg
aatttgcttctgcaggctcatttctcaaggattgatctacctgtaagcgactacgttacg
gataccaagtctgtattggaccaaagcatacgtgtattgcaagccatggtagatgtggct
gctaatggtggctggctcgaaactgctctttccactatgcatcttcttcagatgatcatg
cagggcctttggtgggagaaggatgatcgattagcgctgaagatgttgccatacgtgaac
agtgatgtattgtctgtttttaaagatcgtggtatagtatctggaaacgatttgctctca
agcacggcagatcaagtaagaggggctttaaggactgtgattggccctccacaggtcaca
gaatttctgaatgtatggatgagattgcctcgtacggaagtaaaatggaagttggaacca
agcggaggagataagagcaaagagtgggttctgcgtgttgaagtttccagacgcgtttta
aaacggatgccaaatgcgagggcttacgttccccattttccaaaggtcaaagacgaaggc
tggtggcttgtggctggaaacccgaagacgcgtgaggtctacgcactaaagcgggtcaca
ttcttggaacacttgcgatcaaatttggttctaccaaagcatttgaagcctgaatctgag
cctatcaaactctatttggtgtcagactgttacgtcgggcttgaccaagagttcgagatt
cgaagagcatgttga
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integrated database retrieval system
