Physcomitrium patens (spreading earthmoss): 112279740
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Entry
112279740 CDS
T01041
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00040
Pentose and glucuronate interconversions
ppp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112279740
Enzymes [BR:
ppp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112279740
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112279740
NCBI-ProteinID:
XP_024370179
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Position
3:complement(2051858..2055204)
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AA seq
543 aa
AA seq
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MVSGRVASLLTVLIVLASQWKSPHARSMPVDFDNQEYVPTDQEYPEFPQNTGSNAQSDTP
VFAAQTGDAFEYNSNNGNYDANNWDAETFASEDLVASPSQAAQSNADAATEGELSYDVFI
DFPESVREPPSTSFADDNVYHSKAAYMNDEVFYDTSAADIIYKASDDGLSLATADLNATD
ADDMLASLAKAMGGCGTGNPIDDCWRCDPNWRSHRQALSNCATGFGRNAIGGKNGPIYTV
TNNGDDAKNPQPGTLRYGVTRNGPLWIIFAKSMTIQLKGELFISAYKTVDGRGAEVHIVG
GSQISILRTNNVILHGLHIHDIRPSGPTTIRVSPSKVIRRNKSEGDGLHIWGSRDVWIDH
CYLAKATDGLIDVTRGSTMVTISNCFLEQHDKTMLLGADPDHTEDRNMRVTVAFNKFGPG
LVQRLPRCRFGVFHVLNNDYSAGWGKYAIGGSEDPTILSQGNRFNPAGKKEVTQRINDGG
SSYGGWQRWNWASSGDIFLGGSYFTGSGARATSASVYAKAYSTSSRPAHMVPAITRSAGP
LKL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccgggcgggtggcgagtttgctgacggtgcttatagtgcttgcatcgcagtgg
aagtctccccacgcgaggtcaatgccggtagatttcgacaaccaggagtatgttcccacc
gaccaagagtacccggaattcccccaaaacactgggtccaacgctcaatctgacaccccg
gtcttcgccgcgcagacaggcgatgcgtttgaatataactccaacaatggaaattatgat
gccaacaactgggacgccgaaaccttcgccagcgaggacctggtagcgtcaccttctcaa
gcggcacaatctaacgctgacgccgcgaccgaaggcgagctatcctacgacgttttcatc
gactttccggagagcgtccgagaacccccttccaccagcttcgcagacgacaacgtgtac
cactccaaagctgcttacatgaatgacgaggtcttctacgacacgtctgctgcggacatc
atttacaaggccagcgacgatggtttgagcctcgccaccgctgacttaaatgctacggac
gcggatgacatgctcgcctctttagcgaaggccatgggcgggtgcggtactggcaacccg
atcgacgactgctggaggtgcgacccgaactggcgcagccaccgccaggcactgtccaat
tgcgccaccggattcggaagaaatgccatcggcggcaagaatggacccatctacaccgtc
accaacaatggagatgatgcgaagaaccctcagccgggaacactgcgctacggagtgact
cgaaacggaccgctttggatcattttcgccaagagtatgaccatccaactgaaaggagag
ctcttcatctccgcctacaagaccgtcgacggtcgtggcgccgaagtccacattgtcgga
ggctcgcagatcagcatccttcgcaccaacaacgtcatcctgcacggcctgcacattcac
gacattcgaccatcgggaccaaccaccattcgagtgtccccgtctaaagtaatccgccgc
aacaaatccgagggcgatggccttcacatctgggggtcccgggacgtgtggatcgaccac
tgctacttggccaaggcgaccgatgggctcatcgatgtcacccgcggatccaccatggtc
acaatttccaactgcttcctggaacagcatgacaagacgatgctgcttggagcggacccc
gaccataccgaggacaggaacatgcgggtcaccgtggctttcaacaaattcggacccggc
ctcgtccaacggttgccaaggtgccggttcggcgtgtttcatgttttgaacaatgactac
tcagccggatgggggaagtacgcgattgggggcagcgaagatcccaccattctcagccaa
ggcaaccgattcaatcccgccggaaagaaagaggtaacccaacgcatcaacgacggcgga
tccagttacggaggctggcagagatggaattgggcatccagcggcgacattttcctggga
gggtcgtatttcacgggctccggagccagggccacctccgccagcgtctacgccaaggct
tacagcacatcgtcacgccccgctcacatggtacccgccatcaccagaagcgcaggtcct
ctcaagttgtag
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