Physcomitrium patens (spreading earthmoss): 112287230
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Entry
112287230 CDS
T01041
Name
(RefSeq) protein EXPORTIN 1A-like
KO
K14290
exportin-1
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp03008
Ribosome biogenesis in eukaryotes
ppp03013
Nucleocytoplasmic transport
ppp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112287230
03008 Ribosome biogenesis in eukaryotes
112287230
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
112287230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppp03019
]
112287230
03009 Ribosome biogenesis [BR:
ppp03009
]
112287230
03016 Transfer RNA biogenesis [BR:
ppp03016
]
112287230
03036 Chromosome and associated proteins [BR:
ppp03036
]
112287230
Messenger RNA biogenesis [BR:
ppp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
112287230
Ribosome biogenesis [BR:
ppp03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
112287230
Pre-60S particles
112287230
Transfer RNA biogenesis [BR:
ppp03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112287230
Chromosome and associated proteins [BR:
ppp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
112287230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
IBN_N
CRM1_repeat
DUF3385
Motif
Other DBs
NCBI-GeneID:
112287230
NCBI-ProteinID:
XP_024385811
LinkDB
All DBs
Position
10:complement(3783118..3795182)
Genome browser
AA seq
1068 aa
AA seq
DB search
MAEKLLDFTQPFDVGLLDATVAAFYGTGSKEERAAAERVLRQLQEHPDTWTRVVTILQNS
SIPNSKFYALQVLEGVIKYRWNALPVEQRDGIKNYISDLIVQLSSNEASFRTERLYVNKL
NIILVQVLKHEWPARWPGFIPDLVSAAKSSETLCENCMVILKLLSEEVFDFSRGELTQSK
IKELKNSLNSEFQLIHELCQYVLSMSQRPELIRATLATLHAFLSWIPLGYIFESALLETL
LKLFPVAGYRNLALQCLTEVAVLSFGDFYDAQFVKLYTIFTAQLQMILPPGTNVPESYGN
GTDEDQAFIQNLAMFFTAFFKSHIGVLESNQENQTALLMGLEYLIGISYVDDTEVFKVCL
DYWNSLVCDLFQSECNMETPASSSPLGLQLNGMGAQLSRRKQLYSGPLSKLRLLMISRMA
KPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEQQMLKKLNKQLN
GEEWAWNNLNTLCWAIGSISGSMVEDQENRFLVTVIRDLLNLCEITKGKDNKAVIASNIM
YVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCRRKFVILQVG
ETEPFVCELLKGLPTTILDLEAHQIHTFYEAVGFMIQAESDPQRRDEYLQKLMELPNQRW
VEIINQARQSVEYLKSTEVVRAVLNILQLNTSVASALGQSFLAQISLIYLDMLNVYRMYS
ELISSSIAEGGPYASRTSFVKLLRSVKRETLKLIETFVDKAEDAELIAKNFVPAMMDPIL
GDYARNVSDARESEVLSLFATIINKLKSVMMDDVPRIFEAVFACTLEMITKNFEDYPEHR
LKFFSLLRAIASHCFRALFTLSSQQLKLVMDSIIWAFRHTERNVAETGLNLLLEMLTNFQ
ASEFCNQFHQTYFLTIEQEVFAVLTDTFHKPGFKLHVLILQHLFCLVDSSTLTQPLWDAA
TLGPAAFPSNTEFVRDYTIKLLGTSFPNMTLVEVTTFVNGLFETRSDLGAFKNQLRDFLI
QSKEFSAQDNKDLYAEEAAVQREAERRRMLSIPGLIAPIEIQDEMIDT
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaagctcctggatttcacccagccctttgacgtcggtcttctcgatgctacc
gtcgcagcgttttatggaacaggttcgaaagaagagagagctgctgccgagagggtattg
aggcagctacaagagcatccggatacgtggacccgagttgtaacaatacttcagaactct
tccattccaaattccaagttctatgctcttcaggttctagagggagttattaaatatcga
tggaacgccctacctgtagagcaacgggatggcattaaaaactacatatcggaccttatt
gtgcagctctcaagcaacgaagcgtcgtttcggacagagcggttgtacgtgaacaaattg
aatattattcttgttcaggtcttgaagcatgagtggcctgcgcgatggccaggatttatt
ccggatctcgtgtcggctgctaaaagcagcgagactctttgtgaaaattgcatggttata
ttgaagctcctcagcgaagaggtattcgatttttcacgaggagagttgactcaaagtaag
atcaaagaattaaagaattctttaaacagtgaatttcagctcattcatgaattgtgtcaa
tacgttttgtcaatgtctcaacgccctgaacttatccgagcaacactggctactctacat
gcttttctatcctggattccacttggttacatatttgaatcagcgttgctggagacttta
ttgaagctctttcctgtcgctggttatcgcaatttggctttgcaatgtctgactgaggtt
gctgtcctcagttttggagatttctacgacgcgcaattcgtgaaactttacaccattttt
acggcgcagctccagatgattcttccaccaggtaccaatgtcccagagtcgtatgggaac
ggcacggatgaggaccaggcctttatacagaatctggcaatgtttttcaccgcatttttc
aagtcgcacattggggtgttggagtccaatcaagagaatcaaactgctttgttgatggga
ttggagtacttgatcggaatttcatatgttgatgatacagaggtctttaaggtttgcctg
gactactggaattccctcgtatgtgaccttttccagtcagaatgcaatatggaaactcct
gcctcgtctagtccacttggccttcagttgaatgggatgggggcgcagctttctcgtcgt
aagcagttgtactcgggacctttgtcgaagttgagattgcttatgatcagtcgcatggcc
aagcccgaggaagttttgatagtagaagatgaaaatggcaatatcgtccgcgagactatg
aaagacaacgatgtccttgtacagtataagattatgagggagactttgatttatttgtct
catttggaccacgaagatacagagcagcagatgcttaagaagctgaacaagcaattgaat
ggtgaggagtgggcttggaataatttgaacacactctgctgggctattggttccatatca
ggctccatggttgaagaccaggaaaatcgttttctcgtcaccgtgattcgagacctcctt
aatctatgtgagatcacgaagggcaaggacaacaaggcggtgattgctagcaatatcatg
tatgttgtgggccagtatcctcggtttttgagggcccattggaagtttctgaagactgtg
gtcaataagctcttcgagttcatgcatgaaacccatcctggtgtacaggatatggcttgt
gatacatttttgaagatagttcaaaaatgtagaaggaaatttgtcattcttcaggttggg
gagacagagccttttgtgtgtgagcttctgaagggtttgcctactaccattttggatctg
gaagcccatcaaattcacactttttatgaagctgttggattcatgatacaagctgaatcg
gaccctcaaagacgggatgagtacttgcaaaagcttatggaacttccgaaccagagatgg
gtagagatcatcaatcaagcccgtcaaagtgtcgagtatttaaaatcaacagaagttgta
cgagctgtacttaatattcttcagttaaacaccagtgttgctagcgcccttggtcagtcc
ttcctagctcagatatcgttgatctacttggatatgctgaatgtctatagaatgtatagt
gagctcatatcaagtagcattgctgagggaggaccttatgcatccaggacctcatttgtc
aagcttctcaggtctgtgaagcgggaaaccttgaaattgatcgaaacctttgtggataaa
gcagaagatgccgaactgattgcaaagaactttgtgccagccatgatggatcccatcctg
ggtgattatgctcgtaatgtgtctgacgcacgtgaatctgaagttctctctctgttcgcc
actattattaacaaattgaaaagcgtcatgatggatgatgtaccgcgaatcttcgaagct
gtttttgcatgcactcttgagatgataactaaaaactttgaggactacccagagcatcgt
ctgaagttcttctccttgttacgggcaattgcaagccactgtttccgtgcgcttttcact
ttatcgagtcaacaactgaaactagtaatggattcgatcatctgggcattccgtcacacg
gagcgtaatgttgcagaaactggccttaaccttctccttgaaatgcttacgaatttccaa
gcgtcagagttctgcaaccagttccatcagacctattttctcactattgagcaagaagta
tttgcagtcttgaccgacaccttccacaagcctggattcaaactacatgtcttgattcta
caacacttattttgcctggttgactcatcgactctcacacaaccgctctgggacgcagca
acattaggtccagcagcttttcccagtaatacggaattcgttcgggattacactatcaag
cttttgggaacgtcatttcccaacatgactcttgtcgaggtaacgacattcgtgaacgga
ctttttgaaacccgaagtgatttgggagctttcaaaaaccaactccgtgactttttgatt
caatccaaggagttctcggcccaggacaataaggatctgtatgccgaagaagctgctgta
caaagagaagcagaaaggaggcgaatgctcagcattcctggacttatagctccaattgaa
atccaagatgaaatgattgatacttag
DBGET
integrated database retrieval system
