Physcomitrium patens (spreading earthmoss): 112287683
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Entry
112287683 CDS
T01041
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00040
Pentose and glucuronate interconversions
ppp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112287683
Enzymes [BR:
ppp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112287683
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
112287683
NCBI-ProteinID:
XP_073393155
LinkDB
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Position
10:complement(13958793..13961596)
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AA seq
408 aa
AA seq
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MAPNFLQIMLILVATLPMCWAARPVETSVTIVSGENAASAVFESDIPSSAHNYTRRLLKG
CGTGNPIDDCWRCDPHWRANRQSLANCAIGFGKNAIGGKTGRIYVVTDDSDDDVIDPAPG
TLRYGAMQTEPLWIIFDRNMNIKLKNELIVQSYKTIDGRGANVHIAGGGSITIQYVHNVI
IHGVHIHDIKQTGPAVIRGSPSHFGDRGKADGDAISIYGSHDIWIDHNYLSHCTDGLVDV
TEASTAVTISNNYFTDHDKVMLLGGHPKDSFDKVMQVTVAFNHFGEGLVERIPRCRFGYF
HIVNNFYSPWLMYAIGGSESPTINSEGNFFMAGSFKEVTKRIEDDGSSIDGWEKWNWRSS
GDIFQDGAFFTDSGSAGGGSFYAKATSFSARPAALVASMTNDAGPLML
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgaactttctgcaaataatgctcatactagttgcgactcttccgatgtgctgg
gcggcgaggccagtggagacttccgttacgattgtctctggtgaaaacgctgcatcggct
gtctttgaaagtgatattccttcttccgcccacaattacacccgaagactgctgaagggg
tgtggcacggggaatccaatcgatgactgctggagatgtgatccgcattggagagccaac
cggcagagcttagcaaactgtgccatcggattcggtaagaatgccataggcggcaagact
ggcagaatctatgttgtgacggacgacagcgacgacgacgttatcgaccctgcgccaggc
acacttcgctatggcgcaatgcaaaccgagccactgtggatcatcttcgaccgaaacatg
aacatcaagcttaagaacgaactcatcgtgcaaagctacaagaccatagacgggcgtggt
gccaatgtgcacatcgccggaggaggctccataaccattcagtacgtgcacaacgtgatc
attcacggtgtgcatattcatgacatcaagcagacaggccccgcagtaattaggggaagt
cccagtcacttcggggacaggggcaaggctgacggtgacgcgatctccatttatgggtct
cacgatatatggattgatcacaactatctctcccattgcaccgatggcctcgttgatgta
actgaagcttccaccgcggtgactatctccaacaactacttcacggaccacgacaaggtg
atgcttttagggggccacccgaaggacagcttcgacaaggtcatgcaagtgacggtggca
ttcaaccacttcggcgaaggcttggtggagcgcattccaagatgtcgattcggttacttc
cacattgtgaacaacttctatagcccatggctgatgtacgccatcggggggagcgagagt
ccgaccatcaacagcgagggcaacttcttcatggctgggtccttcaaggaggtgacgaaa
cgcatcgaggacgatggcagcagcatcgatggctgggagaagtggaactggcggagctcc
ggcgacatcttccaggacggcgccttcttcaccgattctggctctgcaggcggcggcagt
ttctatgccaaggccactagtttctccgctcgtcctgccgctttagttgcctccatgacc
aacgacgccgggcctctgatgctataa
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