Physcomitrium patens (spreading earthmoss): 112290925
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Entry
112290925 CDS
T01041
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00040
Pentose and glucuronate interconversions
ppp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
112290925
Enzymes [BR:
ppp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
112290925
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
112290925
NCBI-ProteinID:
XP_024393531
UniProt:
A0A2K1JGS0
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Position
14:4621406..4623656
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AA seq
516 aa
AA seq
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MVRLTLSLLGLLLVCARLGYVQSQDDTVGATEPVIFTFADDSTPQSASLAKQNDTFSNID
SPAPALESEEGKPEWTVADESSGDMDSLASESNGNLVGTADDDNTVIPSPTQPAAPEGPS
NSTDSKADADGFDMVEGGDDKEFTTEDSDTEETSFAARHSCQTGNPVDDCWRCDRNWASN
RQRLASCAVGFGRNAIGGRNGRIYVVTSSRDDNPANPSPGTLRYAVTRPGPLWIIFAYSM
TIKLKNELMITSYKTIDGRGVDVHIAGGAGFTLQFISNVIIHGIAIHDIKPTGPARIMTS
TSHVGNRGRADGDAISIFTSKNIWVDHCYLARAADGLVDVVRGSTAVSVTNCYFTQHNKV
MLLGAHPQDYIDRNMYVTVAYNIFGPGLIQRLPRVRFGNVHVLNNDYTSGWGIYAIAGSE
GPTILSQGNVFNSYKGSKQVTKRIDDGGSTMGGPKNWNWRSEGDKFLDGAFFTSVPMKWS
AQSYSKTVSCSARPASMVERMVKGAGPLSCRRGAVC
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggtacggttgacattgtcccttttggggctactgttggtgtgtgcaaggttggggtat
gtccagtcccaagatgacaccgtcggcgccaccgagccagtgatcttcacgtttgctgac
gattcgacacctcagtccgcgagccttgcgaaacaaaatgataccttctccaatatagat
tctcctgcccctgcattggagagcgaggaagggaaaccagaatggacagtggccgacgaa
tcgagtggagacatggattcattagcttctgagagcaatggcaatctcgtcggaactgct
gatgacgacaatacagtgatcccgtctcctacccaaccagcagcgccggagggaccatct
aactctacggactcgaaggctgacgcagacgggtttgacatggtcgagggtggcgatgac
aaggagttcactactgaggattcggacacggaagagacgtctttcgcagcgagacactcc
tgccaaaccggcaaccctgtggacgattgctggaggtgcgatcgcaactgggcatcaaac
cgccaacggctcgccagttgcgcggtgggattcggacgtaacgcaatcggtggcaggaac
ggaagaatctacgtcgtcacttcttcccgcgatgacaaccccgcaaacccttctccggga
actctccgttatgccgtgacgcgtcccggtccactctggattatcttcgcgtatagcatg
accatcaagctaaagaacgagctcatgatcacaagctacaagactatcgatggtcggggt
gtggacgtccacattgccggaggagccggttttacgttgcagttcattagcaacgtcatc
attcacggaatcgccatccatgacatcaaacccacgggaccagctaggattatgacctcg
actagccatgtcggcaaccgcggccgtgccgacggagacgccatctcaatcttcacctcc
aagaacatttgggtcgaccactgctatctcgccagagccgccgacgggttagtagatgtg
gtcaggggctccactgccgtctccgtgaccaactgctacttcacccagcacaacaaggtg
atgctcctcggcgcgcacccgcaagactacatagacaggaacatgtatgtgacggtggcg
tacaatatattcggccctgggctcattcaacggctgccaagggtccgattcggcaacgtg
cacgtactcaacaacgactacacgtccgggtggggaatatacgccatcgccggaagcgaa
gggcccacgattctctctcagggtaacgtcttcaacagctacaagggttccaagcaggtc
acgaagcgcatcgacgacggcggctccacaatgggaggcccgaagaactggaattggcga
tccgagggggacaagttcctcgatggcgcattcttcactagcgtgcccatgaagtggtcc
gcccagagctactccaagacggtgagttgctcggctcgccccgcttcaatggtggagcgc
atggtgaagggcgctggccctctgagctgccgccgtggagctgtgtgttga
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