Physcomitrium patens (spreading earthmoss): 112292574
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Entry
112292574 CDS
T01041
Name
(RefSeq) serine hydroxymethyltransferase 4-like
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp00260
Glycine, serine and threonine metabolism
ppp00460
Cyanoamino acid metabolism
ppp00630
Glyoxylate and dicarboxylate metabolism
ppp00670
One carbon pool by folate
ppp01100
Metabolic pathways
ppp01110
Biosynthesis of secondary metabolites
ppp01200
Carbon metabolism
ppp01230
Biosynthesis of amino acids
ppp01240
Biosynthesis of cofactors
Module
ppp_M00532
Photorespiration
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
112292574
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
112292574
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
112292574
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
112292574
Enzymes [BR:
ppp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
112292574
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Motif
Pfam:
SHMT
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
112292574
NCBI-ProteinID:
XP_024396953
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Position
15:3857459..3860450
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AA seq
478 aa
AA seq
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MGEEAVEYKVAEWGNQSLEVADEEIYNLIEHEKVRQCRGIELIASENFTSQAVIEALGSA
LTNKYSEGLPGARYYGGNEFIDQIENLCKARALKAFHLDSEKWGVNVQPYSGSPANFAVY
TALLNPHDRIMGLDLPSGGHLTHGYYTSGGKKISATSIFFESLPYKVNYETGYIDYEKLE
EKAMDFRPKMIISGGSAYPRDWDYARLRTIADKVGALLMCDMAHYSGLVAAQEVNQPFDY
CDVVTTTTHKSLRGPRAGMIFYRKGPKPAKKGQPEGAVYDYEDKINFSVFPSLQGGPHNH
QIAALAVALKQVDTPLFKAYAKQVKANAKAIGEALMKKGYKMVTGGTENHLVLWDLRPLG
LTGNKVEKVCELAHITLNKNAVFGDSSALAPGGVRVGAPAMTSRGLKEKDFEQIADFLER
AVNITLKVQKERGKLLKEFNKGLENNEEIAALKRDVEKFSMSFDMPGFDVNKLKYGNE
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaggaggcagtcgagtacaaggtcgccgagtggggaaaccagtctctggaggtt
gctgacgaggagatttacaacctcatcgagcatgagaaggtgcgccaatgccggggcatt
gagctcattgcttccgagaacttcacatctcaggccgtgatcgaagctttggggtccgcc
cttaccaacaagtactcagaggggctccccggagccaggtactatggtggtaatgagttc
atcgatcagatcgagaacctgtgcaaagccagggcgttgaaggctttccacttggacagc
gagaagtggggtgtgaatgtacagccctactctggctcccctgctaacttcgctgtttac
actgcgcttctcaaccctcacgatcgcatcatgggcctggaccttccctcggggggtcac
ttgactcacggatactacacatctggcgggaagaaaatctctgctacttcaatttttttt
gagagcttgccttacaaggtgaactacgagactggatacatcgattacgagaagttggag
gagaaggcaatggacttccgtcctaagatgattatctctggaggaagcgcatatcctaga
gactgggactatgcacggctcaggactattgctgataaggttggagccctgttgatgtgc
gatatggcacactacagtggtctcgtggccgcccaggaagtgaaccaaccatttgattac
tgtgatgtggtgaccaccacgacccacaagagtctgaggggaccccgcgcgggaatgatc
ttctacaggaaaggcccgaagccagcgaagaagggacagccagagggcgctgtctacgac
tacgaagacaagattaacttctccgtcttcccatccttgcagggaggaccacacaaccat
cagatcgctgctttggcggttgcgctcaagcaggtggatactcctctgttcaaagcatac
gcgaagcaagtcaaagccaatgccaaggctattggagaagcattgatgaagaagggatac
aagatggtgactggcggcacagagaatcacttggttttgtgggatctgcgacctctcgga
ctcactggaaacaaggtggagaaagtgtgtgagcttgcccacatcacattgaacaagaat
gccgtattcggtgacagcagtgctttggcccctggtggtgtccgagttggcgcacccgcc
atgacatctcgtgggctgaaggagaaagacttcgagcagattgctgactttctggagcgt
gccgtaaacatcaccttgaaggtgcagaaggagaggggcaaattgctgaaggaatttaac
aagggattggaaaacaacgaagagatcgctgccctgaagagggatgtagagaagttctcc
atgtcttttgacatgcctgggttcgatgtcaacaaacttaagtatggcaacgaatag
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