Physcomitrium patens (spreading earthmoss): 112293495
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Entry
112293495 CDS
T01041
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
ppp
Physcomitrium patens (spreading earthmoss)
Pathway
ppp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ppp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112293495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppp04131
]
112293495
Membrane trafficking [BR:
ppp04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
112293495
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
112293495
NCBI-ProteinID:
XP_024398740
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All DBs
Position
16:10411273..10414019
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AA seq
200 aa
AA seq
DB search
MKITALLVLKAPVAQGGESLMLANASDVSHFGFFQRQAAKEFILFASRTIAGRTPLGQRQ
TVEQDEYVVHCYNRSGLCGLVFADKEYPLRSAFSVINKVLDEYQKTFGDSWKIKNTDSTD
AWPFLPEALVKYQNPTEADKLAKIQKDLDETKVILHKTIESVLKRGENLDNLVDKSNDLS
SASQMFYKQAKKANQCCTIL
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcactgcgttgttggtgctgaaagcgcctgtggcccaaggaggagagtcgctt
atgttagctaacgcctcggatgtgtcgcatttcggtttcttccagcgccaggccgcgaag
gagtttattctgtttgcgtcgcggaccatagcgggacggactcctcttggacagcgccag
actgttgaacaggacgagtacgtggtgcattgctacaaccgaagtggactttgtgggcta
gtctttgctgataaggagtaccccctgaggagtgctttctcggtcattaacaaggtgtta
gatgaatatcagaagacttttggtgactcttggaagattaagaatacagacagtaccgat
gcatggccttttttaccagaagctcttgtgaagtaccagaatcctactgaggctgataaa
ctggccaagatccaaaaagatttggacgagacaaaagttatcctgcataaaacaatcgaa
agcgtccttaaacgcggggagaatctcgataatctggttgacaagagtaacgacctaagc
tctgcttcacagatgttctacaagcaagccaagaaggctaatcagtgctgcaccattttg
tga
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