Paenibacillus polymyxa SQR-21: PPSQR21_019350
Help
Entry
PPSQR21_019350 CDS
T03178
Symbol
ffh
Name
(GenBank) signal recognition (srp) component
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq02024
Quorum sensing
ppq03060
Protein export
ppq03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PPSQR21_019350 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PPSQR21_019350 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PPSQR21_019350 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ppq02044
]
PPSQR21_019350 (ffh)
Enzymes [BR:
ppq01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
PPSQR21_019350 (ffh)
Secretion system [BR:
ppq02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PPSQR21_019350 (ffh)
Eukaryotic Sec-SRP protein
PPSQR21_019350 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
AAA_17
Zeta_toxin
CbiA
AAA_30
APS_kinase
AAA_31
6PF2K
cobW
AAA_33
TPP_enzyme_M
AAA_18
MMR_HSR1
NPR1_interact
TsaE
ArsA_ATPase
ResIII
Thymidylate_kin
AAA_16
EAP30
Motif
Other DBs
NCBI-ProteinID:
AHM65583
LinkDB
All DBs
Position
2159350..2160726
Genome browser
AA seq
458 aa
AA seq
DB search
MAFEGLSTRLQNVFSKLRGKGKVSEDDVAQAMREVRLALLEADVNFKVVKDFIAKVKEKS
VGKEVMDSFTPGMVIIDIVNKELTELMGGSQAKLAKANKPPTVIMMVGLQGAGKTTTSGK
LAKLLQKQNHRPLLVAGDIYRPAAIKQLQILGEQINAPVFTLGDQTSPVEIAKQGMQHAK
DNGNDYVIIDTAGRLHVDEELMEELRQIHTNVKPDEVLLVVDSMTGQDAVNVAEHFNNSL
ELTGVVLTKLDGDTRGGAALSVKAVTGCPIKFATLGEKLDAMEPFHPERMASRILGMGDM
LSLIEKAQSNIDADKAKEMERKMRNAEFTFEDFLEQMDQVKKLGPIDQILDMIPGMGNMK
QMKDIKVDDKQMGRIEAIVHSMTTQEKQNPDMINHSRRKRIAVGSGTSLAEVNRLIKQFD
EMRRMMKQFSDMMGPKGGKNKALKQLKSMGKGMKFPFR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgaaggattatcgactcgcttgcaaaatgtattcagtaaattgcgcggcaaa
ggaaaggtgtctgaggatgatgtggctcaggcaatgcgtgaagtgcgattggctttgctt
gaagcggacgttaacttcaaggttgtaaaggactttattgccaaggtaaaggagaaatcc
gttggtaaggaagtgatggacagctttacgccaggtatggtcattatcgacatcgtaaac
aaggaattgaccgagttgatgggtggaagtcaggccaagcttgccaaagcaaacaaaccg
cctacagtcatcatgatggtgggtctccagggcgcaggtaagacgacgacgtcaggtaag
ctggcgaagttgctgcaaaagcaaaaccatcgtccattgcttgtagctggtgatatttat
agacctgccgcgatcaagcagcttcagattctcggtgagcagattaatgcacctgtattt
acattgggagaccagacaagcccggtggaaatcgcaaaacagggtatgcagcatgctaag
gataatggtaatgactacgttattatagatactgccggtcgtcttcatgttgatgaagaa
ctcatggaagagttgcgccagatccatactaatgtcaaaccggatgaagttctgctggtt
gtagatagcatgacaggacaggacgcagttaacgttgcggagcactttaacaatagcctt
gagttaacgggagttgtactgacaaagctggatggcgacactcgtggtggcgcggccttg
tcggttaaagctgtgacgggatgcccgatcaagtttgctacattgggtgaaaagctggat
gcgatggagccgtttcaccctgagcgaatggcttcacggattttaggcatgggtgacatg
ttgtccctgattgaaaaagcgcagtccaacatcgacgctgataaggcgaaggaaatggaa
cggaaaatgcgcaatgccgagtttactttcgaggattttctggagcaaatggatcaggtt
aagaagcttggcccgatcgaccagattctcgatatgattcctggtatgggcaacatgaag
caaatgaaagacatcaaagtggatgacaaacagatgggccggattgaggctatcgttcat
tcgatgactacacaggaaaagcaaaacccggacatgattaatcatagccgtcgcaagcgg
attgctgtaggcagtggaacatcgctggctgaggtaaatcgtctcattaagcaatttgac
gaaatgcgccgtatgatgaagcagttctcagatatgatgggacctaagggtggcaaaaac
aaggctctgaagcagctgaagagtatgggcaaaggtatgaagtttcctttccgttaa
DBGET
integrated database retrieval system
