Paenibacillus polymyxa SQR-21: PPSQR21_020680
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Entry
PPSQR21_020680 CDS
T03178
Name
(GenBank) ribosome small subunit-dependent GTPase a
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
ppq
Paenibacillus polymyxa SQR-21
Pathway
ppq00730
Thiamine metabolism
ppq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppq00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
PPSQR21_020680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppq03009
]
PPSQR21_020680
Enzymes [BR:
ppq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
PPSQR21_020680
Ribosome biogenesis [BR:
ppq03009
]
Prokaryotic type
GTPases
PPSQR21_020680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
ABC_tran
FeoB_N
GTP_EFTU
AAA_29
Dynamin_N
Septin
APS_kinase
AAA_16
AAA_28
AAA_22
CoaE
G-alpha
NACHT
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AHM65716
LinkDB
All DBs
Position
2293937..2295034
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AA seq
365 aa
AA seq
DB search
MSIHEYGWSDYWNGLWDQWKQNYEERAGNTQIRPARLIADYGQKVKLITMDGERWGAASG
KLRHAIVDPAEMPAVGDWVAITTSDEVSDAVIHAVLPRKSQISRQAAGFETKEQLIATNV
DTLFLVNALNHDFNMRRLERYLIMAWNSGVNPVVVLSKSDLCEDVEQRVAEAEGVAPGVP
VIVISALQNEGREQLEAFLEPGCTVALTGSSGSGKSTIVNWLSGAEVQLTQDVREEDSRG
RHTTTHRQLFPIAKQAVLLDTPGMRELNLWDDSTGVAHTFADIMETAQQCRFADCKHKGE
AGCAVEEAIQRGELSESRVNNYRKMQRELEYQARKEADRRRKDSRSSTTPGRRDQRGGWR
RDVEW
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgagtatacatgaatacggttggtctgattactggaacggtttgtgggaccaatggaag
caaaactatgaggaacgagcaggaaacacgcagatacgccctgcccgcttgattgccgat
tatggacaaaaggtgaagcttattacgatggatggggaacgctggggagccgcttcaggt
aagctaagacatgctattgttgacccggcggaaatgccggctgtaggggattgggtggcc
atcaccacgtcggacgaagtatcggatgcagtaatccatgctgtcttgccacgcaaaagc
caaatatctagacaggccgcaggctttgagacgaaggagcaactgatcgcgaccaatgta
gatacgcttttccttgttaatgcgctgaatcatgattttaatatgcgcagattagaacgg
tacttaatcatggcctggaatagcggagtaaacccggttgtcgtgttgagtaagagtgac
ctttgtgaagatgtcgaacagcgggttgcagaagcggaaggagttgctcctggagtaccc
gttatcgtaatttctgctttgcagaacgaaggcagagagcagctggaggcgttccttgag
cctgggtgtacggttgctttgactggctcttccggtagtggcaaatccacaatagtgaac
tggctatccggggctgaagttcaactgacacaggatgtgagggaggaagacagccgaggc
aggcatacaaccacacaccgacagctttttcccattgcaaagcaagccgttctgctcgat
acacccggtatgcgcgagcttaatctatgggatgattccacgggtgtagctcataccttt
gctgatattatggaaacagctcagcaatgccgttttgccgattgcaagcataagggagaa
gctggatgtgcggtggaggaagctatccaaagaggggaattatctgaatccagagtgaac
aattatcgcaagatgcagcgggaactggaatatcaggcacgcaaggaagcagaccgacgt
agaaaagatagccgttcaagtacaactccgggccgcagggatcagcgaggtggttggcga
cgtgatgtggagtggtaa
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