Pseudomonas protegens CHA0: PFLCHA0_c35540
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Entry
PFLCHA0_c35540 CDS
T02671
Symbol
ybaO1
Name
(GenBank) HTH-type transcriptional regulator YbaO
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
pprc
Pseudomonas protegens CHA0
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprc03000
]
PFLCHA0_c35540 (ybaO1)
03036 Chromosome and associated proteins [BR:
pprc03036
]
PFLCHA0_c35540 (ybaO1)
Transcription factors [BR:
pprc03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
PFLCHA0_c35540 (ybaO1)
Chromosome and associated proteins [BR:
pprc03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
PFLCHA0_c35540 (ybaO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_11
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
AGL85322
UniProt:
A0A2C9ENS1
LinkDB
All DBs
Position
complement(3976493..3976963)
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AA seq
156 aa
AA seq
DB search
MPLDLDRIDKALLIALQDNARLTNAELADSVALTTSPCWRRVKILEESGVITGYQAILSP
KALGYGVTAFVSVMMESHSQDTARAFEQRLLEIPEIIACHNVSGRYDFLLEVLAKDLESF
GEFAREVLQTLPAVKEIYSSFSFKSVKPLRQIPVQE
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcccctcgatctggaccgtatcgacaaagccctgctgatcgccctgcaagacaacgcc
cggctgaccaatgccgagctggcggacagcgtcgccttgaccacctcgccgtgctggcgc
cgggtgaagattctcgaagagagcggggtgattaccggttaccaggcgatcctctcgccc
aaggcgctgggctatggggtcaccgcctttgtcagcgtgatgatggaatcccactcccag
gacaccgcccgggccttcgagcagaggctgctggagatcccggaaatcatcgcctgccac
aacgtctccgggcgctacgactttctcctcgaagtactggccaaggacctggaatccttc
ggcgaattcgcccgtgaagtgttgcagaccctgccggcggtgaaggagatctattcgagc
ttttccttcaagtcggtcaagccgttgcggcagattccggtacaagagtga
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