Pseudomonas protegens CHA0: PFLCHA0_c56790
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Entry
PFLCHA0_c56790 CDS
T02671
Symbol
soxA4
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
pprc
Pseudomonas protegens CHA0
Pathway
pprc00260
Glycine, serine and threonine metabolism
pprc01100
Metabolic pathways
Module
pprc_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pprc00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PFLCHA0_c56790 (soxA4)
Enzymes [BR:
pprc01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
PFLCHA0_c56790 (soxA4)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
PFLCHA0_c56790 (soxA4)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
NAD_binding_8
DAO
HI0933_like
GIDA
Pyr_redox_3
FAD_binding_3
Thi4
Pyr_redox
AlaDh_PNT_C
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
AGL87407
UniProt:
A0A2C9EUP9
LinkDB
All DBs
Position
complement(6317056..6320073)
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AA seq
1005 aa
AA seq
DB search
MSQTNRLSNGGRIDRNKVLTFTFNGQSYKGFEGDTLASALLANGVDIIGRSFKYSRPRGI
FAAGCEEPNAVLQIGATEATQIPNVRATQQALYQGLVATSTNGWPSVNNDMMGILGKVGG
KLMPPGFYYKTFMYPQSFWMTYEKYIRKAAGLGRSPTENDPDTYDNMNQHCDVLIVGAGP
AGLAAALAAARSGARVILADEQEEFGGTLLDSRESLDGKPAAEWVASVVAELQSLPDVLL
LPRATVNGYHDHNFLTIHERLTDHLGDRAPIGQVRQRIHRVRAKRVVLATGAHERPLVYG
NNDVPGNMLAGAVSTYVRRYGVAPGKKLVLSTNNDHAYRVALDWLDASLQVVAIADARHN
PRGALVEEARAKGIRILTSSAVIEARGSKHVTGARVAAIDVKAHKVTSPGEWLDCDLIAS
SGGYSPVVHLASHLGGKPVWREDILGFVPGEAPQKRVCVGGINGVYSLGDTLADGFEGGV
RAASEAGFQAVEGVLPKALARLEEPTLALFQVPHEKGTARAPKQFVDLQNDVTAAAIELA
TREGFESVEHVKRYTALGFGTDQGKLGNVNGLAIAARSLNVSIPQMGTTMFRPNYTPITF
GAVAGRHCGHIFEPVRFTALHAWHVKNGAEFEDVGQWKRPWYFPKNGEDLHAAVKRECQA
VRDSVGLLDASTLGKIDIQGPDAREFLNRIYTNAWTKLDVGKARYGLMCKEDGMVFDDGV
TACLADNHFLMTTTTGGAARVLQWLEIYQQTEWPDLKVYFTSVTDHWATMTLSGPNSRKL
LSEVTDIDLDKDGFPFMTWKEGLVGGVPARVFRISFTGELSYEVNVQADYAMGVLEQIVE
AGKKYNLTPYGTETMHVLRAEKGFIIVGQDTDGSMTPDDLNMGWCVGRTKPFSWIGWRGM
NREDCVREQRKQLVGLKPIDPTQWLPEGAQLVFNPKQAIPMSMVGHVTSSYAHNSLGYSF
ALGVVKGGLKRLGERVFAPLADGRVIEAEIVSSVFFDPKGDRQNI
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaccaatcgcctgtccaacggcggacgcatcgaccgcaacaaggtcctgacc
ttcaccttcaacggccagagctacaagggttttgagggcgacaccctggcctcggccctg
ctggccaacggcgtggacatcatcggccgcagcttcaagtactcccggccccggggcatc
ttcgccgcaggctgcgaggagcccaacgcggtgctgcagatcggcgccaccgaagccacc
cagatccccaacgtgcgcgccacccagcaggcgctgtaccagggcctggtcgccaccagc
accaacggctggcccagcgtcaacaacgacatgatgggcattctcggcaaggtcggcggc
aagctgatgccaccgggcttctactacaagaccttcatgtacccgcaatcgttctggatg
acctacgagaagtacatccgcaaggccgcgggcctgggccgttcgcccaccgagaacgat
ccggacacctacgacaacatgaaccagcactgcgacgtgctgatcgtcggcgccggcccc
gcgggccttgccgccgccctggcagcggcccgcagtggcgcccgggtgatcctggccgac
gagcaggaagagttcggcggtaccctgctggacagccgcgagagcctggacggcaagccg
gcggcggagtgggtggccagtgtggttgccgaactccagtcgctgccggatgtgttgctg
ctgccgcgggccacggtcaacggctaccacgaccacaacttcctgaccattcacgagcgc
ctcaccgatcacctcggcgaccgcgcgcccatcggccaggtacgccagcgcatccaccgg
gtacgcgccaagcgcgtggtgctggccaccggcgcccatgagcggccgctggtctacggc
aacaacgacgtgccgggcaacatgctggctggcgcggtctccacctatgtgcgccgctac
ggcgtggccccgggcaagaaactggtgctgtccaccaataacgaccacgcctaccgtgtg
gccctggactggctcgacgccagcctgcaagtggtggccatcgccgatgcgcggcacaac
ccgcgcggcgccctggtggaagaagcccgggccaagggcattcgcatcctcacctccagc
gcggtgatcgaggcccgtggcagcaagcatgtgaccggcgcgcgtgtagcggccatcgac
gtcaaggcacacaaggtcaccagccccggcgaatggctcgactgcgacctgatcgccagc
tccggcggctacagcccggtggtgcacctggcctcgcacctgggcggcaagccggtgtgg
cgcgaagacatcctcggtttcgtgcccggtgaagcgccgcagaaacgtgtgtgcgtcggt
ggcatcaacggcgtctacagcctcggcgataccctggccgacggtttcgaaggcggtgtg
cgcgccgccagcgaagccggtttccaggccgtggagggcgttctgcccaaggccctggcc
cgtcttgaggaaccgaccctggcgctgttccaggtgccccacgaaaaaggcacggcgcgt
gcgccgaagcaattcgtcgacctgcagaacgacgtcaccgccgccgccatcgaactggcg
acccgcgagggcttcgagtcggtggaacacgtcaagcgctacaccgccctgggcttcggc
accgaccagggcaagctgggcaacgtcaacggcctggccattgcagctcgctcgctgaac
gtcagcattccgcagatgggcaccaccatgttccgtccgaactacacgccgatcaccttc
ggcgccgtggctggccggcactgcgggcacatcttcgagccggtgcgcttcaccgcgctg
catgcctggcatgtgaagaatggcgccgagttcgaagacgtcggccagtggaaacgcccc
tggtacttcccgaaaaacggcgaagacctgcatgccgcggtcaagcgcgaatgccaggcc
gtgcgcgacagcgtcggcctgctggacgcctcgaccctgggcaagatcgacatccagggc
ccggacgcccgggagtttctcaaccgcatctacaccaacgcctggaccaagctcgacgtg
ggcaaggcccgctacggcctgatgtgcaaggaagacggcatggtcttcgacgacggcgtc
accgcctgtctggccgacaaccacttcctgatgaccaccaccaccggcggcgcggctcgc
gtgctgcagtggctggagatctaccagcagaccgaatggccggacctcaaggtgtacttc
acctcggtcaccgaccactgggccaccatgaccctgtccgggcccaacagccgcaagctg
ctgagcgaagtcaccgacatcgacctggacaaggacggcttcccgttcatgacctggaag
gaaggcctggtgggtggcgtaccggcgcgggtgttccgtatctcgttcaccggcgagctg
tcctacgaggtcaacgtccaggccgactacgccatgggcgtgctggagcagatcgtcgag
gccggcaagaagtacaacctgaccccctatggcaccgagaccatgcacgtgctgcgggcc
gagaagggcttcatcatcgtcggccaggacaccgacggttccatgaccccggacgacctg
aacatgggctggtgcgtgggccggaccaagcccttctcctggatcggctggcgcggcatg
aaccgtgaagactgcgtgcgcgagcagcgcaagcaactggtgggcctcaagccgatcgac
ccgacccagtggctgccggaaggtgcgcaactggtgttcaaccccaagcaggcgatcccg
atgagcatggtgggccacgtgacctccagctatgcccacaactccctgggttattccttc
gccctgggtgtggtcaagggggggctcaagcgcctgggcgagcgggtcttcgcaccgctg
gccgatggccgggtgatcgaggcggaaatcgtttcctcggtgttcttcgaccccaaaggc
gaccgccagaacatctaa
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