Pseudodesulfovibrio profundus: DPRO_2433
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Entry
DPRO_2433 CDS
T05258
Symbol
uvrA
Name
(GenBank) ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC
KO
K03701
excinuclease ABC subunit A
Organism
pprf
Pseudodesulfovibrio profundus
Pathway
pprf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pprf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DPRO_2433 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprf03400
]
DPRO_2433 (uvrA)
DNA repair and recombination proteins [BR:
pprf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DPRO_2433 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DPRO_2433 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
AAA_21
nSTAND1
AAA_16
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_23
AAA_25
AAA_33
AAA_22
AAA_18
A24_N_bact
NACHT
nSTAND3
ATPase
RNA_helicase
YhfH
BCA_ABC_TP_C
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
SOB59341
UniProt:
A0A2C8FBC1
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All DBs
Position
DPRO:complement(2510651..2513416)
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AA seq
921 aa
AA seq
DB search
MTKSTNNHVIHIEGARHHNLKDLTLDIPRDQLVVVCGPSGSGKSTLAFDIVYAEGQRRYV
ESLSAYARQFLPQMDKPDVDKVEGLSPAISLEQQTATRNPRSTVGTVTEVYDFLRVFFAR
LGKFYCPECGKPIEAQTTDAIVETILAKDPGTKFMILAPLVEHQKGTHKDLFAKLRKEGF
VRVRIGGTMYTLDDTPELEKNKKHTIELVVDRLVIKDGIKKRLADSVELALELGEERMIV
SVVGGENPGDTFMSTLSTCPSCKISMPRLTPQLFSFNSPQGACQTCNGIGSVEYFEPDLI
SPNKGLSLNDGGVIPWKSAYRQEQFAPQLKKLGKEYGFTLDTPLGEYSEKAWNALFHGCS
KTHWQGIVPILEYGQQQSGVWDHWTARFQQSRPCPSCHGARLRPEALAVRVADKNMFEFV
SMSIQRALDWLNDLEFTGQETLISEPLLKELTHKLGFMVNVGLEYLSLGRNMGTLSGGES
QRIRLASQLGSGLVGVTYVLDEPSIGLHPRDNERLINTLRSLQSRGNTVLVVEHDEPTIL
EADHVIEIGPSSGWLGGEIVFQGPVKKLLKSDTLTGKYLRGDMFIAPPETRRKATDHITL
RKVETNNLKDLDVDIPLGLMTCVTGVSGSGKSSLVMDSLYKHMQLYNGNKANNPGKIGGI
DGLDKVEKVISIDQTPIGRTPRSNPATYTKIFDEIRKIFSGSKEARTRGYQPGRFSFNVK
GGRCEACKGDGQIRVEMHFLPDVYVTCETCKGKRYNAQTLEVEYKGKNIADVLDMTVRQA
REFFANHPPLMRKLDVLAQVGLEYIQLGQPATTLSGGEAQRIKISRELGKRNLPGALYIL
DEPTTGLHMHEVGKLIRVLHALVEKGATVIVIEHNTDVINASDHVIDLGPGGGEHGGRIV
ASGTPEEIIANPDSATGQFLK
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatccacaaataatcatgtcatacatatcgaaggtgcacgccaccacaacctg
aaagatctgaccctggacatcccccgcgaccaactggtcgtcgtgtgcggcccttccggc
tcgggcaagtccacgctggcattcgacatcgtctatgccgaaggtcaaaggcgatatgta
gagtccctttccgcctatgcccgccagttcctgccccagatggacaagccggacgtggac
aaggtggaagggctttccccggccatttcccttgagcagcagaccgccacacgcaacccc
cgctccactgtgggtaccgtaaccgaggtctatgactttttgcgtgtgtttttcgcgaga
ttgggcaaattctattgccccgaatgcggcaagcccatcgaggcgcagaccacggacgcc
attgtcgagaccattctcgccaaggatccgggcacaaaattcatgatcctcgctccgctg
gtggaacatcagaaggggacccacaaggacctgttcgccaaactccgcaaggaagggttc
gtccgtgtccgcatcggcggcaccatgtatacccttgatgacactcccgagctggagaag
aacaagaagcacaccatcgaactggtggtggaccgcctcgtgatcaaggacggcatcaag
aaacggctggccgactcggtggaattggcacttgaactgggcgaggaacggatgatcgtc
agcgtggtcggcggggagaatcccggcgacacgttcatgtccaccctgtccacctgcccg
tcatgcaagatttccatgccgcgcctcaccccgcagcttttctccttcaactcgccgcag
ggcgcatgccagacatgtaacggcatcggctccgtagaatatttcgagccggacctcatt
tcgcccaacaagggactgtccctcaatgacggaggcgtcatcccatggaaatccgcctat
cgtcaggagcaattcgccccccagctcaaaaaactgggtaaggaatacggattcacgttg
gatacgccactcggagagtactccgagaaggcgtggaatgccctgttccacgggtgttcc
aagacgcactggcaaggcattgtgcccattctcgaatacggacagcagcagtccggcgtc
tgggatcactggaccgcacggttccagcagtcccgaccgtgtccgtcgtgccacggcgct
cgactgcgccccgaagcgctggccgttcgcgtggccgacaagaacatgttcgagtttgta
tccatgtctatccagcgagccttggactggctcaacgatctggagttcaccggccaggag
acccttatttccgaaccgctgctcaaggagctgacacacaagcttggcttcatggtcaac
gtcggcctggaatatctttcccttggccgcaatatgggcacgctgtccggcggtgaatcg
cagcgtatccgtctggcatcccagcttggttcaggattggtgggtgtcacctatgttctg
gacgagccgtccatcgggctgcacccacgggacaacgaacgcctcatcaacaccctgcgc
tcgctgcaatcccgcggcaacaccgtgctggttgtcgagcacgacgagccgaccattctt
gaagcggatcacgttatcgagatcggccccagctcgggttggctcggcggcgaaatcgtg
tttcagggaccggtcaagaagctgttgaagtccgacacgttgaccggcaaatatctgcgc
ggcgacatgttcatcgcgcccccggagacccggcgcaaggccacggatcacatcaccttg
cgcaaggttgagaccaacaacctcaaggaccttgatgtcgatatacccctcggtttgatg
acctgcgtcaccggtgtatcgggatcaggaaaatcatccctggtcatggactcgctgtac
aagcacatgcagctgtacaacggcaacaaagccaacaatcccggtaaaatcggcggtatc
gacgggctggataaggtcgaaaaggtcatctccatcgaccagacccccatcggcagaaca
ccccgctcgaacccggccacttacaccaagatttttgatgaaatccgtaaaatcttttcc
ggttccaaggaagcgcgaacccgcggttaccagccgggacgtttctcattcaacgtcaag
ggcggacggtgcgaagcctgtaagggcgacggtcagattcgggtggagatgcacttcctg
ccggacgtttacgtcacctgtgagacttgcaagggcaagcggtacaacgcccagaccctt
gaggtggaatacaagggcaagaacattgccgatgtcctcgacatgacagtccgacaggcg
cgggaattcttcgccaaccacccgccgctcatgcgcaagctcgatgttctggcgcaggtc
ggcctggagtacatccagcttggacagcccgccaccaccctctcgggcggtgaagcgcag
cgcatcaagatatcccgcgaactcggcaagcggaacctacccggagcattgtacattctg
gacgaaccgaccacagggctgcacatgcatgaggtcggcaaactgatccgtgtgctccac
gcactggtggaaaagggagccacggtcatcgtcattgaacataataccgacgtcatcaat
gcctcggatcatgtcatcgaccttggtcccggtggtggtgaacacggagggcgcattgtt
gcctccggtacaccggaagaaatcatagccaatccagactcggcgaccggccagttcctg
aaatag
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