Poeciliopsis prolifica (blackstripe livebearer): 129360900
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Entry
129360900 CDS
T09758
Symbol
ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pprl03037
]
129360900 (ift88)
Cilium and associated proteins [BR:
pprl03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
129360900 (ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_12
TPR_19
TPR_16
TPR_6
TPR_14
TPR_7
TPR_9
ANAPC3
TPR_11
TPR_17
TPR_CcmH_CycH
ARM_TT21_5th
TPR-S
TPR_10
ARM_TT21_4th
ARM_TT21_C
RPN7
DUF2225
TPR_MalT
HEAT_Nup120
DUF2989
ARM_TT21_N
Consortin_N
TPR_15
DUF7017
HAT_PRP39_C
SHPRH_helical-1st
ARM_TT21_2nd
FumaraseC_C
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
129360900
NCBI-ProteinID:
XP_054887374
LinkDB
All DBs
Position
Unknown
AA seq
891 aa
AA seq
DB search
MENVHLAVEEDDLYSGYNDYNPTFDSEELENDVGFQQAVRTSHGRRPPMTAKFPGTAIGG
RPLVSSFGSRIPMASSMGRPMTGAVQDGSARPMTAVRAAGYSSSLMRGSTFDPLGQSKGP
APPLEAKNEDTAEEKIKILEKRVNDLIEESCMAQSIGALQLALEKAKEAGRKERALIRQR
ETSGQTEHINLDLTYSGEVIKQGSNMTTVAASISTQLHWQYEQRKAVLLNLANQYANNEM
YPEALNSYHVLVKNKMFTNAGRLKVNMANIYFKQKNYPKAIKFYRMALDQISNAHKELRI
KILQNIGVVFVRLGQYSDAITSFEHIMAESPNIKTGFNLILCYYAIGDRERMKKAFQKLI
SVPLGIDDEDKYIPASDEPSANMVIEAIKNDKLHQMERDLKILAEKYIMTAAKLIAPAIE
TSFASGFDWCVEMVKCSQYVELANDLEINKAITYLRQKDFNQAVETLKTFEKKDSRVKSA
AATNLSFLYFLEKDYDQADRYADLAMNADRYNPAALINKGNTVFVKKDYEKAAEFYKEAL
RNDSSCTEALYNLGLSYERLNRLEEALDCFLKLHSILRNGAEVMYQLAHLYEQLGDPQQA
IEWLMQVISATPTDPHVLAKLGKLHDDEGDKSQAFQYYSESFRYFPSNIDVIEWLGAYYI
ETQFCEKAIQYFERATLIQPNCVKWQLIVASCYRRSGNYQKALDTYKEIHRKFPENVECL
RFLVRLSTDMGLKEVQEYATKLKKVEKMKELREQRVKSGRENSARSRREGSTGSAGESIV
STSVLTSPKKSDVTENAKAEPQPERKQFSPLLDSDSGRSSSSSSKGERLSAKMRSLPGSN
EPYEASSPKELDASYVDPLGPQTDRPKTGAKKPADDDDFADEDLGDDLLPE
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgttcacctggccgtcgaggaggacgacctttattcgggttacaacgactat
aatcccacatttgactccgaggaattggagaacgatgtgggcttccagcaggcagtcagg
accagtcatggaaggagacctccgatgactgcgaagtttccaggcaccgccatcggaggt
cgacctttagtttcatcttttggttcccgaatccccatggcttcatcaatgggcagaccc
atgactggagctgtccaggatggctccgcccgtccgatgacggctgtcagagctgcaggt
tactcatcctcactgatgcgtggctcaacctttgaccccctgggacagtccaaggggcct
gcgcctccacttgaagcaaagaatgaagacacggcggaagagaagatcaagatcctggag
aaaagagtgaacgacctgatagaggagagctgcatggcacagagcataggcgccttacag
ctggctcttgaaaaagccaaagaggcagggaggaaagagcgagcgctgatcagacagagg
gaaacgtccggacaaacggagcacatcaacttagacctcacttactctggagaggtaata
aaacagggatcaaatatgactaccgtggcagcaagcatttcgactcagctacactggcag
tatgagcagagaaaagctgttctgctcaaccttgccaaccagtacgcgaacaatgaaatg
tacccggaggctctgaacagctaccatgtcctcgtgaaaaacaagatgttcactaacgca
ggccgcctcaaagtcaacatggccaacatctacttcaaacagaagaactaccccaaagcc
atcaaattctaccgcatggcgctggatcagatctccaacgctcacaaggaactgaggatc
aagatcctgcagaatatcggagtggtgtttgtccgcctgggtcagtactcggacgccata
acgtccttcgagcacatcatggcagagagtcccaacataaagaccggcttcaacctcatc
ctgtgctactacgccattggagacagagagaggatgaagaaggcctttcagaagctcatc
tctgttccactgggcatcgatgatgaagataagtacatcccagccagtgacgaacccagt
gcaaacatggtcattgaggccattaaaaacgacaagcttcaccagatggagagggatctg
aaaatcctggctgagaagtacatcatgactgcagccaaactcattgctccggccatcgag
acttccttcgctagcggctttgactggtgtgttgagatggtgaagtgctcgcagtatgtc
gagctagccaatgatctggagatcaacaaagccatcacctacctcaggcagaaggacttc
aatcaggcggtggaaactctgaaaacatttgagaagaaggacagcagagtgaaaagcgct
gcagccaccaacctttctttcctctacttcctggagaaggactacgatcaggctgaccga
tacgctgacctcgctatgaacgccgatcgctacaatcccgccgccctcatcaacaagggc
aacacagtgtttgtcaaaaaggactacgaaaaggctgctgagttctacaaagaggcgctg
aggaatgactcgtcctgcactgaggccctctataacctgggtttgtcctatgagagactg
aacagactggaggaggccttggactgcttcctgaagcttcattcgattctgaggaacggc
gctgaggtcatgtatcagctggctcacctctacgagcagctcggagaccctcagcaagcc
atcgagtggctgatgcaggtcatcagcgccacgcccacggatccacatgtactggccaaa
ctgggaaagctgcatgacgacgagggggacaagtcccaggctttccagtactacagtgag
tctttcaggtactttccctccaacatcgacgtgatcgagtggctcggggcttactacatc
gagacccagttctgtgagaaggccatccagtactttgaacgagcaacgctcatacagcca
aactgtgtgaagtggcagctaatagtggcgagttgttacagaagaagtggaaactaccag
aaagctctggacacctacaaagagatccatcgaaagtttccagaaaatgtggagtgcctg
cgcttcctggtgaggctgtcgacagacatgggactgaaggaagtccaagaatatgccacc
aagctgaagaaggtggagaagatgaaggagctcagagagcagagggtgaagtcgggccga
gagaacagcgccagaagtcgcagggagggcagcacagggagtgctggtgagtccatcgtc
tccacatctgtcctcacctctcctaagaagtccgacgttacggaaaatgccaaagcagag
cctcaacctgagcgtaaacagttcagtccactgttggactcagacagcggccgcagcagc
agcagcagctctaagggggagcgtctgagcgccaagatgaggtcacttcctggttccaat
gagccctatgaagccagcagcccaaaagagctggatgcgtcgtacgtggacccgctgggg
cctcagacggacagaccaaagacgggggccaagaagccggcggatgatgatgactttgca
gacgaagacctgggagacgacctgctaccggagtag
DBGET
integrated database retrieval system
