Poeciliopsis prolifica (blackstripe livebearer): 129361764
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Entry
129361764 CDS
T09758
Symbol
col6a2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04510
Focal adhesion
pprl04512
ECM-receptor interaction
pprl04518
Integrin signaling
pprl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129361764 (col6a2)
04518 Integrin signaling
129361764 (col6a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129361764 (col6a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129361764 (col6a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprl04147
]
129361764 (col6a2)
00536 Glycosaminoglycan binding proteins [BR:
pprl00536
]
129361764 (col6a2)
Exosome [BR:
pprl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
129361764 (col6a2)
Glycosaminoglycan binding proteins [BR:
pprl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129361764 (col6a2)
Hyaluronan
Extracellular matrix or blood plasma proteins
129361764 (col6a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
Motif
Other DBs
NCBI-GeneID:
129361764
NCBI-ProteinID:
XP_054888802
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MMLAFETVVLCLLLGALTHAQKADCNQKRECPIHLYFTIDTSETIALQESPPGALVKSIR
SFTEQFVRRLNDEEIRGAVKVTWGIGGLHFSQTQEVFSPIQGKDAFISDLVRIEKYLGKG
TYIDCALRRMSEEMLLGPSSSGTPLRFAVVITDGHVTGNPCGGIKVSAEDARDKGIRVFA
VAASTNIEETGLKEIANSPASVFRDNFMAVDLSRGRPAIHTATIDRIIQTMRHMAFVDCY
NVSCLETEGQPGPKGHRGQKGAKGDNGEAGQKGERGRPGDPGIEGPIGQPGTKGEPGPKG
EKGEIGTQGKKGVAGIPGRNGTDGQKGKIGRIGAPGCKGDPGDRGPDGHPGDVGERGPPG
TDGEKGDPGRPGRAGPPGPPGEGGPQGERGSNGSPGLPGNKGTPGLPGTAGKRGEEGRRG
DYGPKGEPGLDGTKGEKGEMGPEGLRGVPGGPGGKGAKGDTGLPGPRGPAGASGEPGKNG
TRGDPGDIGPRGEPGQPGPKGDAGRPGFSYPGPRGDPGDRGDPGKRGPPGSRGDCGQKGE
PGNKGTPGDPGEPGPTGEPGQRGPRGGPGRDGDPGPEGDPGLTECDVMNYIRETCGCCDC
EKRCGALDIVFVIDSSESVGLTNFTLEKNFVINTINRLGSFAKDPQSETGTRVGVVQYSH
NGTFQAINLNDSNINSLTAFKEAVKRLEWIAGGTWTPSALKFAYDNLIRHSRRAKANVTV
VVITDGRFDPRDDDRLLPYLCNHPGVDVSAIGIGDMFEQVEENESLQSIACQKQGRVMGM
RRFADLVAEEFIDKIETVLCPDPAIICPDLPCKSEPAVASCVQRPVDVIFMLDGSERMGL
ENHRRAKEFIENVARRLTLADGPTDDTKARLALLQFGSTGDHKEEFPLTHNLTVIVDSLA
AVNYLDSSSSLGNGIIYAVNNLVIRQSQRLSRRNAEVAFVFITDGITSTDQLDEGVDAMK
RAEGVPTVIALGSDTDEEVLRKVSLGDSSAIFRGDDFSVLGKSSFFERFIRWIC
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgatgctggcgttcgagaccgtcgtgctctgccttctcctcggagccctgactcacgcc
cagaaagcagactgcaaccagaagagagaatgtcccatacacctgtacttcaccatcgac
acgtctgagaccatcgcgctgcaggagtcgccccctggagcgttggtgaaaagcatccgg
tcattcacggagcagtttgtacggcgattgaacgatgaagaaatccggggcgctgtcaaa
gtcacctggggcatcggtggactgcacttctcccagactcaggaggttttcagccccatc
caaggaaaggacgccttcatctccgatctcgtgagaattgagaaataccttggaaaaggc
acctacatcgactgcgctctccgaagaatgtccgaggagatgctgcttggaccctcttcg
agcggcacacccctccggttcgccgtggtcatcaccgacggccacgtgaccggaaacccc
tgtggaggcatcaaggtgtcggcggaagacgcgcgtgataagggcatcagggtgtttgcc
gtggcggcatcgacgaacatcgaggagacgggactgaaagagattgccaactccccggcg
tcggtcttcagagataacttcatggctgtggacctgagcaggggcagacctgccatacat
accgcaacgatagaccgcatcatccagacaatgagacatatggcgtttgtagactgttat
aacgtgtcctgcctggagacagaagggcagcctggtccaaaaggccacagaggacagaaa
ggagcaaaaggagacaatggagaagcaggacaaaaaggtgaaagaggtcgcccaggagac
cccggcattgaaggtcccatcggtcaaccgggtactaagggtgaacctggtcccaaaggc
gagaagggagagattggaactcaaggcaaaaagggtgtggctggtattccaggacgtaac
ggaaccgatggacaaaagggcaaaattggacggattggtgccccgggttgtaaaggagat
ccaggcgacagaggtcccgatggtcatccaggagatgtcggcgaacgtggccctccagga
actgatggggagaagggtgaccctgggcgtcctggaagagctggtccccctggcccgcct
ggagaaggtggaccacagggagaaagaggaagtaatggatcacctggccttcctggcaat
aaaggaacccctggtctccctggaactgcgggaaaacgaggcgaggaaggaagaagagga
gactacgggcctaaaggtgaacctggactagatggtaccaagggagagaagggtgaaatg
ggaccagagggcttgagaggagtccctggaggaccaggaggcaaaggtgcaaagggagac
actggcttgccaggacctagaggaccagcaggagcttcaggggagcctggaaaaaacggc
accagaggagaccctggtgatattggaccgagaggagagcctgggcagcctggaccaaag
ggagatgctggaagacctggttttagctatcctggaccgagaggagatccaggtgacaga
ggggacccgggcaagcgtggaccccctggcagcagaggagactgtggtcagaagggagaa
cccggaaataaaggaactccaggagatccgggtgaaccagggcccactggggaaccaggg
caaagaggaccaagaggaggtcctggtcgtgatggagatccaggtccagagggagatccc
ggacttactgaatgtgatgtcatgaactacatcagagagacgtgtggctgttgtgactgc
gagaaacgctgtggagccttggacattgtctttgttattgacagctcagagtctgtggga
ctcaccaacttcaccttggagaagaacttcgtcatcaacaccatcaacagactgggatct
tttgccaaagacccgcagtccgaaacaggcacaagggttggtgtggtacagtacagccat
aatgggaccttccaagcaatcaatctcaatgacagcaacatcaactcattgacggcgttt
aaggaagctgtgaagcgattagagtggatcgcaggaggaacctggactccatctgctctt
aagttcgcctacgacaacctgatcaggcacagccggcgagccaaagccaacgtcacggtt
gtcgtgattacggacggacgctttgacccaagagacgacgacaggctgctgccatatctg
tgcaatcacccgggcgtcgatgtgagcgccatcggtatcggagacatgtttgagcaggtc
gaggagaacgagagtctgcagagcattgcctgccagaagcagggcagagtgatgggaatg
aggcgattcgcagacctggtggcagaggaattcatcgacaagattgagactgtgctctgc
cctgatcctgccatcatatgccctgatcttccatgtaagtcagagccagctgtggctagt
tgtgtgcagagaccggtggatgtgatcttcatgttggacggttcggagaggatgggcctg
gagaaccaccgccgggccaaggagttcatcgagaacgtggcccgccgcctgaccctggcg
gacggcccgaccgacgacaccaaggcccgtctggctttgctgcagttcggcagcacagga
gaccacaaagaagagttcccgctcacgcataatctcacggtcatcgtggattcgctggcg
gctgtgaactacttggattcctcatcctctttgggcaacggcatcatctatgctgtaaac
aatctggtgatcagacagagtcagcggctctcccggcgcaacgccgaggtggccttcgtc
ttcatcacggacggaataacctccaccgaccagctggacgagggcgtggacgccatgaag
agggcggaaggcgttcccacggtgatcgctttgggaagcgacaccgacgaagaggtgctg
cgcaaggtgtcactgggagactcatctgccatctttaggggcgacgacttctccgtgctg
ggcaaatcttccttctttgagcgcttcatccgctggatttgctag
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