Poeciliopsis prolifica (blackstripe livebearer): 129369782
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Entry
129369782 CDS
T09758
Symbol
ncam1b
Name
(RefSeq) neural cell adhesion molecule 1b isoform X1
KO
K06491
neural cell adhesion molecule
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
pprl04514
Cell adhesion molecule (CAM) interaction
pprl04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
129369782 (ncam1b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129369782 (ncam1b)
04517 IgSF CAM signaling
129369782 (ncam1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprl04131
]
129369782 (ncam1b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pprl04515
]
129369782 (ncam1b)
04090 CD molecules [BR:
pprl04090
]
129369782 (ncam1b)
00536 Glycosaminoglycan binding proteins [BR:
pprl00536
]
129369782 (ncam1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pprl00537
]
129369782 (ncam1b)
04091 Lectins [BR:
pprl04091
]
129369782 (ncam1b)
Membrane trafficking [BR:
pprl04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
129369782 (ncam1b)
Cell adhesion molecules [BR:
pprl04515
]
Immunoglobulin superfamily
NCAM1/2
129369782 (ncam1b)
CD molecules [BR:
pprl04090
]
Proteins
129369782 (ncam1b)
Glycosaminoglycan binding proteins [BR:
pprl00536
]
Heparan sulfate / Heparin
Adhesion molecules of cell surface
129369782 (ncam1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pprl00537
]
Others
129369782 (ncam1b)
Lectins [BR:
pprl04091
]
I-type lectins (Siglecs)
129369782 (ncam1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
FN3_DSCAM-DSCAML_C
V-set_CD47
C1-set
C2-set_2
Pur_ac_phosph_N
C2-set_3
Adeno_E3_CR1
Ig_PDGFR_d4
DUF4959
Motif
Other DBs
NCBI-GeneID:
129369782
NCBI-ProteinID:
XP_054901379
LinkDB
All DBs
Position
Unknown
AA seq
1209 aa
AA seq
DB search
MVQTRNVLLALLLVGSTVSLEVQITPTHGEISLGESKFFMCDVVGVAKHVDWYGPSGERI
APNRPDLTVTRNDESSSTLTFYEAKTDSAGTYKCVATNGDQQAEATVKVKIFQRITFTNA
PSRQEFNEGDNANIVCDVTSSPPPTVFWKYKGAKIQMEKDVRFKVLSNNHLQIRGIKKTD
EGMYMCEARLMARGEIDLRPISVVVNVLPTIRIWQSEVNATAEIAQPATLTCAVDGYPEP
MVTWIRNGVELRDEEKYDFNEDGSEMTIMDVTKLDEGEYTCVAKNKAGESEKELSLRVFV
KPKITYIVNRTASETEEQVTVTCEASGDPTPTISWSYGEQVFTEGDQAHLNRIYQASWTR
PEQHKSPDGNVVVRSDARVSSLTLKYVKYTDAGQYLCTARSAIGEDEQTAYLEVRYTPKI
HGTVAVYTWEGNPVNISCEVKAFPTDVSIVWLRDGLQLPNSNTTNIKIFRTPLSSYLQVT
PESENDFGSYNCSASNEMGTESKEFLLIQAEVPSSLVIDEVRPFSTTALIQFGEPESTGG
VPVLKYKAEWRMQGRSSWMQKVYEVQDDFVNEVTITGLKPESRYEVKLSAINGKGEGESS
PTELFKTEPVRNPNPPKLEGSVEPKGNSLKVSWIKQDDGGSPILHYLIRYKPIQTSQWKP
EIRMPSGSEYVVLRGLDWDTEYDVYVVAENLKGKSPPATMSFRTSAEPEAFPDLGEEGPF
FMNIILWAGILVVVFILLLLAVDVTCYFVNKCGLIMCLCGKSGTGTKGHTMEEGKAAFVK
DESKEPIVTVRTEDECTANHNAAGPIEPNETTPLTKPELVASLALDTPTSVATNSDTATA
TIDPAQESPSSETTTLTCSLSTLANEPSPTPLTAPAPTPESNTAPPTPVISSTAVEAKMA
PLLEERGGKTSEEPEKTSNPPATPEQCRPQKSGTPIPPKRRHSPRIAAQNAKNSPPVSPL
AVSSPLFPDGKKPAPSPPVNKPTQRANAEALSKEMLAQTADTTANIAPPKPAPESKPGLP
DSAAYTFSDFDTDNPADNNMPTTKPAPINTHSDIPNAVEDPHLKNPVTLLADVPSPLPIT
PIASAVPNDLLTPGSDLYDLTAPDAVHKNADLELQLRNSAGKPSRPLSDLISLESPSTVP
SLPSGDQPDFPPSGPVLETSETLKTAPPVNDEKIFADEKSKLEEGDLPSPLITSAHNSVI
QTNVTESKV
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atggtccagaccaggaatgttttattagccttgcttcttgtgggcagcacagtttcattg
gaggtccagatcacacctacccatggtgagattagccttggagagtccaaattcttcatg
tgtgatgttgtaggcgttgccaaacacgtggactggtatggcccgagcggggagcggata
gccccgaatagaccagacttgactgtaacccgcaacgatgagtcatcttccaccctcaca
ttttatgaagccaagaccgatagcgccgggacgtacaagtgcgtcgccaccaacggagac
cagcaagcagaggcaaccgttaaagtgaaaatctttcaaagaataaccttcacaaatgca
ccgtctcgccaagagtttaatgaaggagacaacgcaaatatcgtctgtgatgtcaccagc
tcacccccacctacagtcttttggaaatacaaaggagccaaaatacagatggagaaagat
gttcgtttcaaggtgctaagcaacaatcaccttcaaatccgcggcataaagaagaccgat
gagggcatgtacatgtgtgaggctcgcctcatggcccgcggcgagattgatctgcgtccc
atcagcgttgtggtgaatgtgctcccaaccatcagaatatggcagtctgaagtcaacgcc
acagcagagattgcacaacctgccactctgacctgtgctgttgatggctaccctgaaccc
atggtgacctggataaggaatggagtagaactcagagatgaggagaaatacgactttaat
gaagatggctccgaaatgactataatggatgtaaccaagctggacgaaggagagtatacg
tgcgttgccaagaacaaggccggggagagcgagaaggaactcagtctgagagtgtttgtt
aaaccgaagatcacatacatagtgaaccggaccgcttcagagacggaagagcaggtgact
gtgacttgtgaagcatctggagatccgactccaaccatcagctggagctacggtgagcaa
gtcttcaccgaaggagaccaggcacatctaaacaggatctatcaggcatcatggactcgg
cctgagcagcacaagagcccagatggaaatgtagtagtgaggagcgacgctcgtgtgtcc
tccctcactctgaagtatgtcaagtatacagatgccggtcagtatctctgcacagctcgc
agtgccattggagaggatgaacagaccgcttatctggaagtccgctatacacctaagatt
cacggaacagttgcggtttacacctgggagggaaacccggtcaacatcagctgcgaggtc
aaggcttttcccacagatgtgtcaattgtttggctcagagatggactgcagcttccaaac
tcaaacaccaccaacatcaaaatcttcagaactcctttatccagttacctacaggttaca
ccagagtctgaaaacgattttggaagctataactgcagcgcctcaaatgagatgggcacc
gagtccaaggagttcctgctcattcaggccgaggttccgtcatcgttggtcattgatgaa
gtgaggcctttctccaccaccgccctcatccagtttggagagcctgaatcaactggaggc
gttcccgttctcaagtacaaagctgagtggaggatgcagggcaggagcagctggatgcag
aaagtctacgaggtccaagacgacttcgtcaacgaggtgacgatcacgggcctgaagccg
gagagccgctacgaggtgaagctgtcggccattaatggcaagggcgaaggagagagcagc
cccacggagctgttcaagaccgagcctgtccgaaatcctaatcctcctaagcttgaaggg
tcagtggagcctaaaggcaactccctcaaagtcagctggattaagcaggatgatggcgga
tctcccatcctgcattatcttatccgctataaacccatccagacgtcacagtggaagcct
gaaatccggatgcccagcggcagcgaatacgtcgtgctgcgtggactggactgggacacg
gagtacgacgtgtatgtggtggccgagaacctgaaggggaagtctccgcccgccaccatg
tccttcagaacatctgcagagccagaggccttcccagatctgggcgaggagggcccgttc
ttcatgaacatcatactctgggcaggaatccttgttgtagtatttatactcctgctgcta
gcagtggatgtcacttgttactttgtcaacaaatgtggccttatcatgtgcctgtgtgga
aaatcaggcactgggacgaaggggcacacgatggaagagggcaaagctgcttttgtgaaa
gacgagtccaaagagcccatagtgacagtcagaacagaggatgaatgcacagccaatcac
aacgcagccggaccgatagagcccaatgaaactacacctctcacaaagccagagctggtg
gcttctctggcactggacacccccacctccgtagccaccaactcagacacagccaccgcg
accattgatcctgctcaggaaagcccctctagcgagaccaccacactcacttgcagcctg
tccaccctggccaacgagccctcgcccaccccgctcaccgctccagccccgacccctgag
tccaacacggccccgccgacccccgtgatctcctcgaccgccgtcgaagccaaaatggcg
ccgttacttgaggagagggggggtaagacctcggaagagccggagaagactagcaatcct
cctgccacccccgaacagtgtagacctcaaaagtctggaacgccaattccgccaaagcgc
agacactctcccagaatcgcagctcagaatgctaaaaacagtccgccggtttcccctctc
gccgtgtcttctcctctctttccagatggcaagaaacctgcgccgagcccaccggtcaac
aagcccactcagcgggccaacgccgaggccttaagcaaagagatgctggcgcaaactgct
gacactacagcgaacattgccccgccaaaaccagccccagagtccaaacctggtcttcca
gattctgccgcatacacctttagtgattttgacacagataatccagccgataacaacatg
cccacaacaaaacccgctccgattaacactcattcagatatccctaatgccgtcgaagat
ccacacctcaaaaatcccgtcactctattggcagacgtcccctcgcctttacccatcacc
ccgatcgcttcggcagtcccgaatgaccttctcacgccggggtcagacctgtacgactta
acggctccggacgcagtgcataaaaatgcagatttagagttacagctgagaaacagcgca
ggaaaaccctcccggcccctctcagacctgattagcttagagagcccgtccaccgtcccc
tctctgcccagcggagaccaaccagacttccctccctcaggcccagttctggagacttca
gagactctcaagaccgctcctcctgtcaacgatgagaagatatttgctgatgagaaaagc
aaactggaggagggagacctaccaagccccctgatcacttcggcacacaacagtgtcata
cagacaaatgtgacagagagcaaagtatga
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integrated database retrieval system
