Poeciliopsis prolifica (blackstripe livebearer): 129371078
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Entry
129371078 CDS
T09758
Symbol
tnxba
Name
(RefSeq) tenascin
KO
K06252
tenascin
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04510
Focal adhesion
pprl04512
ECM-receptor interaction
pprl04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129371078 (tnxba)
04518 Integrin signaling
129371078 (tnxba)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129371078 (tnxba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pprl00536
]
129371078 (tnxba)
Glycosaminoglycan binding proteins [BR:
pprl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129371078 (tnxba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
Fn3_Dep-1_3rd
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
EGF_TEN
EGF_Teneurin
EGF_2
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
129371078
NCBI-ProteinID:
XP_054903418
LinkDB
All DBs
Position
Unknown
AA seq
1255 aa
AA seq
DB search
MLIILGLLLLLTPFSSFQTTAPDKRDAAGSNVTKANAVLTFSKPKTTAAPSKQSLNPTLK
PNVVTVTILPTAGSNQKSAPNAATTTKSKLSVAVVQTTPPSPAKAPKATDTNRDKHKVNQ
TASVKLLSLSEEKANKIKSEPTGVHQDQSTITKLFSDSTLKTSRNKSQQSHNQTTSSKSP
LSSNEKNAEDKSNHNVPSVSSFGSKPTKDRAATSNQTVFDIPLTTGDEKSKDKLTSNVPS
LPASGGKTSQGKTTASGNQTIAQIHIPKSDEKSKDKLTQGTPSLSTISKSTKVKLPVSSN
QTTFDNSPTGGDKKSKDTSASNTLPLPTNDTKITKNKHKESGQSVGGIHHQINNEKAKDK
PGERVGGFNKDKEMGTTTVTQTPLTQAVSKDSVGPSLPLKVVISFNGDWSHTKEQELTLK
PGAPLVMTHSINLLPDGCTGGCEAEIAALKGRLTRLEREMSLLKDKCPCSANCPNDCSGK
GKCEKGKCICHKGLTSPDCSKCAKDAECFKDDKKSSDTTTESMNDNEKEVSEEKTEIKKL
PPTTNPQVTKKERPRKLPPQDDPQSNVTLSSENKTKPTKIKNDNKNKSVEQSDTNKNQEK
TSTGTNRISTSPSTKDNKAQENNTTINNKRLGGLGSVKVVNISTSTFTITWLAPQRMFKN
FTVIRRELRMDSDTDENEGLGEEIVERDWMSGTTTSTEVHSQSTNTTISSGRSVESRSKT
ETKRISRVVPGSARSFKFSNLKANTRYVVHVFGSTADRRSKIHRVTATTGPEKPTELVFS
NVTESSLTVSWTKPNTIFTGFRVTYINIATGKSQFVSVDSHQSSVVLSTLSAGSSYIISV
TTTKGRAQSDELTSVITTVPAPPTHLQVINVTDNTAMLRWTPSLGKVDRFIVSYGSSKTP
NVTVTVMLSGNSAQYQLKGLQRGTLYKVKVRTQKNNLQSMGISTSFTTANVVKASEIGGR
SAVIAWRTSVVFHSYRVIYQMAKEEAKEVILEPPVTEYKLTGLIPSSSYSVVVQGEKNGK
YTSLVTSQFITGKLRFPFPTECSQELLNGALESGEVTIYPQGKEGRAVRVYCDMETDGGG
WTVFQRRMNGKTDFYRTWSEYKAGFGNLSEEFWLGNELLHNLTSIGPVSLRVDLQSGNDT
AYAHYTNFSVASEGRNYTLTVSGYTGTAGDSMKYHNGRPFSTRDKNPDPQGIHCAKAYVG
GWWYKNCYKVNLNGLYGTNSNNQGIVWIDWKGKDSSIPFSEMKFRPSRFSPATHG
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgttaattatcctcggacttctcttacttctaaccccattctcctcctttcaaaccacg
gcccctgacaaaagagatgccgcaggaagcaatgtgaccaaagccaatgctgttttaacc
ttttcaaaaccaaaaaccactgctgccccttctaaacagagtttgaaccccactcttaag
ccaaacgttgtcactgtgacaattttacccactgcaggctccaaccaaaaatcagcaccc
aatgctgcaacaaccaccaaaagcaaactcagtgttgcagtggttcaaaccactccacca
tcaccagcaaaggctcctaaagccactgacaccaacagagacaaacacaaagtcaaccag
acagcttcagtaaagctgctgtcacttagtgaagaaaaagccaacaaaatcaagtctgag
cctactggagttcaccaagaccagtcaactatcacaaagcttttctcagatagtactttg
aaaaccagcagaaacaaatctcaacaatctcacaatcaaactacatcatcaaaatctcct
ctaagcagtaatgagaagaatgctgaggacaagtccaatcacaatgttccttctgtgtct
tcctttgggagtaagcccaccaaagacagggctgcaactagtaaccagactgtttttgat
attcccctcaccaccggtgatgagaagtccaaagacaagttaacttcaaatgttccatct
ttacctgccagtggtggcaaaacttctcaaggcaagacaacagcctctggtaaccagacc
attgctcaaatacacatccctaaaagtgatgagaagtccaaagacaaattaactcagggc
actccatctttatctaccatcagtaaatctacaaaagtcaaactcccagtatcttctaat
cagacaacttttgataattctccaactggtggtgataaaaagtctaaagatacgtctgct
tcaaacactctgcctttacctaccaatgacactaaaattactaaaaataagcataaagag
tctggacaatcagttgggggtatccatcatcagatcaataacgagaaggccaaagacaag
cctggtgaaagagttgggggtttcaataaagataaagaaatgggcaccactactgttact
cagactcctctaacccaggcagtcagcaaagacagtgttggtccttcactaccccttaaa
gtggtcatcagtttcaatggtgactggagccacacaaaggaacaggagctgacgttaaag
cctggtgctccactggtgatgacacatagcatcaacttgctacctgatggttgtacaggg
ggatgtgaagctgagatagctgctctgaaaggacgcctgacccggctggaaagagagatg
tcccttctaaaggataaatgtccatgttctgcaaattgcccaaatgactgtagtggcaag
gggaaatgtgagaaggggaaatgcatttgccataaaggattgacaagtcctgactgcagt
aagtgtgcaaaagatgccgagtgctttaaagacgataagaagagttcagatacaaccact
gaatctatgaatgacaatgaaaaagaggtcagtgaagaaaaaacagagatcaaaaagctt
cctccaacaacaaatccacaagtcacaaagaaagaaagaccaaggaaattaccaccccaa
gatgatccacaatcaaatgtaacattgagtagtgagaataaaaccaagcccacgaaaatc
aagaatgacaacaaaaacaagtctgttgagcagtccgacacaaacaagaatcaagaaaag
acatccactggcacaaaccgaatttcaacaagtccatcaacaaaggacaacaaagctcaa
gagaacaatacaacaatcaataacaaaagacttggaggtttaggatcagtgaaggttgtg
aatatctccacctcaaccttcactatcacatggttagcgccacaacgtatgttcaagaat
ttcactgtaatcagaagagagcttcgcatggacagtgacactgacgagaatgaggggctt
ggagaggagattgttgaaagagactggatgtctggcacgacaacatcaactgaagtccac
agtcagagcaccaacacaactatctcctctggtagaagtgttgaatccagaagtaaaact
gaaactaagaggatctcaagagtggtgcctggcagcgcaagatccttcaagttcagtaat
ctcaaggcaaacacacgttacgtggtccatgtatttggctctacagcagacagaagatcc
aagattcacagagttacagcaaccacaggtcctgagaaacccacagaactggtttttagt
aatgttacagagtcctctctgactgtttcttggaccaaaccaaacacaatatttacaggc
tttagagtaacttacatcaacattgcaacagggaaaagccagtttgtgtctgtggactct
caccaatccagtgttgttctgtctacattgtctgctggatcatcctacattatcagtgtc
accacaaccaaaggaagagctcagagtgatgaactcacttcagttatcactacagtacct
gctcctccaacacatctccaagtcatcaatgtgacagataacacagctatgctgcgttgg
acacccagcctggggaaagtagatcgtttcattgttagctacgggtcctccaagactcca
aatgttacagtaacagtgatgctgtcaggaaattcagcacagtaccagctgaaaggctta
cagagaggaactctgtataaggtcaaagtgcggacccaaaagaacaatctccagagtatg
ggaatatctacttcatttacaacagcaaatgtggttaaggccagtgaaattggtggcagg
tctgcagtgattgcctggaggacttctgttgtttttcacagctacagagtgatctatcag
atggcaaaagaggaggcaaaggaagtcatcctggagccacccgtcacagagtataaactg
actggcctgattccttcatcatcctattctgttgtggtacaaggagagaaaaatggaaag
tatacatcacttgtcacgtcacagtttatcaccggaaaattgcgcttccctttccctact
gaatgctcacaagaattgttaaatggagctctggagtcaggggaagtgaccatctaccca
caagggaaagaggggcgagcagtgagagtttattgtgacatggaaacagatggaggcggc
tggacggttttccagagaaggatgaatggaaaaactgatttctacagaacctggagtgaa
tataaagcaggctttggaaacctgagtgaagagttctggctgggtaatgagctccttcac
aacctgaccagtatcggccctgtgagcttgagagtggatttgcaatctggaaatgacaca
gcttacgctcattacaccaacttttctgttgcttcagaagggagaaactatactcttact
gtatctggatacacaggaacagcaggtgactcaatgaagtaccataatggccgcccattc
tcaactcgagacaagaacccagaccctcaggggatccactgtgctaaggcttatgtggga
ggctggtggtacaaaaactgctataaagtcaacctcaacggcctttatggcacaaacagc
aataatcagggaatagtctggatagattggaaaggcaaagactcgtccattcccttctct
gagatgaagttcagaccgtctcggttctcccctgcaactcatggctaa
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