Poeciliopsis prolifica (blackstripe livebearer): 129375629
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Entry
129375629 CDS
T09758
Symbol
cacna1c
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1C
KO
K04850
voltage-dependent calcium channel L type alpha-1C
Organism
pprl
Poeciliopsis prolifica (blackstripe livebearer)
Pathway
pprl04010
MAPK signaling pathway
pprl04020
Calcium signaling pathway
pprl04260
Cardiac muscle contraction
pprl04261
Adrenergic signaling in cardiomyocytes
pprl04270
Vascular smooth muscle contraction
pprl04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129375629 (cacna1c)
04020 Calcium signaling pathway
129375629 (cacna1c)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
129375629 (cacna1c)
09153 Circulatory system
04260 Cardiac muscle contraction
129375629 (cacna1c)
04261 Adrenergic signaling in cardiomyocytes
129375629 (cacna1c)
04270 Vascular smooth muscle contraction
129375629 (cacna1c)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprl04040
]
129375629 (cacna1c)
Ion channels [BR:
pprl04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
129375629 (cacna1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
129375629
NCBI-ProteinID:
XP_054910841
LinkDB
All DBs
Position
Unknown
AA seq
2334 aa
AA seq
DB search
MLRGLFQRKLKHERLEEEPEVRFKGSLVSERDLGYKYVRPGGSDYSPPPLPRPPPVGLTN
EHRGGGSHGDHSGGGGGVNRGVGVVGLAPEHIPTPGAALSWQAAIDAARQAKMMGNAASS
GGAGLGVGGGGPISTASSTQRKRQHYASKPKKQTTTTATRPPRALLCLTLKNPIRRACIS
IVEWKPFEIIILMTIFANCVALAVYIPFPEDDSNATNSNLERVEYLFLIIFTVEAFLKVI
AYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKGDGATPIGGKAAGFDVKALRAF
RVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFMGKMHKTCI
YSHSGTNAEEKPAPCAPDGAYGRHCMQNGTKCQVGWEGPNDGITNFDNFAFAMLTVFQCI
TMEGWTDVLYWMQDAMGYELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGD
FQKLREKQQLEEDLKGYLDWITQAEDIDPENEEEGLDDDKPRNCKGRHFLSLRGAVKKNA
AFLRKALSMPASENESVNTDNAPGGDVEGETCCTRLAIRISKSKFSRYSRRWNRLCRRKC
RAAVKSQVFYWLVIFLVFLNTLTIASEHHKQPQWLTDVQDIANKVLLALFTGEMLLKMYS
LGLQAYFVSLFNRFDSFVVCGGILETILVETKIMSPLGISVLRCVRLLRIFKITRYWNSL
SNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDDTRRSTFDNFPQSLLTV
FQILTGEDWNSVMYDGIMAYGGPSFPGMLVCIYFIILFICGNYILLNVFLAIAVDNLADA
ESLTSAQKEEEEAKERKKLARLASPEKRHDNEKPPIEEKKSEKIELKSITSDGETNTATK
INMDDCCGDENEEKNPYPVNDYIGDEDEDEPEMPVGPRPRPLSDIQLKEKAIPMPEARAF
FIFSHTNKFRVLCHKIVNHNIFTNLILFFILLSSISLAAEDPVKNDSFRNQILGYADHVF
TGLFTIEIILKMTAYGAFLHKGSFCRNYFNILDLVVVSVSLISSGIQLDFSTSSAINVVK
ILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGKF
SYCSDSSKQTQAECRGFYIMYKDGDVGKPEKAHRKWENSDFNFDDVLQGMMALFAVSTFE
GWPGLLYRAIDSHAEDVGPIYNYRVVISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEQ
EYKNCELDKNQRQCVEYALKARPLRRYIPKNPYQYKVWYVVNSTYFEYLMFTLILLNTIC
LAMQHHGQTKNFNDAMNILNMLFTGLFTVEMILKLIAFKPRGYFSDPWNVFDFLIVIGSI
IDVILSEINPAESSSSSSSSSSSSSSSSSSHPHVVRPMGLQNSEENARISITFFRLFRVM
RLVKLLSRGEGIRTLLWTFIKSFQALPYVALLIVMLFFIYAVIGMQMFGKIALRDNTQIN
RNNNFQTFPQAVLLLFRCATGEAWQEIMLACSPNHPCEKGSTNENSTNHDDCGSQFAIIY
FVSFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHL
DVVTLLRRIQPPLGFGKLCPHRVACKRLVSMNMPLNSDGTVMFNATLFALVRTALRIKTE
GNLEQANEELRAIVKKIWKRTSMKLLDQVVPPAGDDEVTVGKFYATFLIQEYFRKFKKRK
EQGLVAKVPPKTALSLQAGLRTLHDIGPEIRRAISGDLNVEEEIDKGMKESVSAASEDDI
FRRTGGLFGNHVNYYNQTDGRGSFPQSFTTQRPLHISQKGSPCEGESPSHEKLMDSTTFT
PSSYSSSGSNANINNANNTGMAGVTTQGVSRFPSPSISTVDGHTDQPLTPILLPRSAWCF
PPKRMFYDTLMRSDSSDSRLPIIQRGEGSTEETYDESYGDDREYQDDEHSLSSDMLVYHD
ETCKQLTPMEETEEVGEQKGGGWQSPRRVFLCPTTLTRRSSFHLECLRRQTRPDVSQKTA
VPLHLVHHQALAVAGLSPLLRRSHSPTLFSRLCSTPAANPTDQCGDASYQRVPSLRLEGS
NSHEKLNTSLPSVNCGPWYNDSNGNSPVDSPSPTPVPSQRAPRPVSLTVPSLLGKDPSSL
SHGSAGSLVEAVLISEGLGHFAQDPSFIEATKAELADACDMTIEEMEHAASNILNSNTAT
NPTSSTSSTSQHSPNGSLPCHNAAAAATHRDRVAGLSPGDAGAEAGGGRGYIHGPSSIEE
RQELLARGAGREEEEEEPNVREERPHRSSAVVAGARQKNSRLLEDEDLECVTSL
NT seq
7005 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggggcctttttcagaggaaactaaaacatgaaagactggaggaggaacccgag
gtccgatttaaggggtcgctggtgtccgagagagatttgggatacaagtatgtcagaccc
ggaggctccgactactctccccctccccttcctcggcctcctccagttggcttgacgaac
gagcacagaggcggcggtagccatggcgaccacagcggtgggggaggaggggtcaaccgt
ggggtgggtgtggttggccttgcaccggagcacattcccaccccgggagcagccctgagc
tggcaggcggccattgacgccgcacggcaggcgaagatgatgggcaacgctgcgtcaagc
ggaggggcggggcttggggtgggtgggggcggccccatttccacagccagctccacgcaa
aggaagagacaacactacgcttctaaacccaagaaacaaaccacaacgacggccacaagg
ccgccgcgggccctgctttgtctcacactcaagaaccccatccgtcgggcgtgcatcagc
atcgtggagtggaaaccatttgagatcatcatcctgatgaccatctttgctaattgtgtg
gccttagccgtctacatccccttccctgaggatgactcgaatgccaccaactccaacctg
gagcgtgtggagtacctgttcctcatcatttttactgtggaggcgttcctcaaggtaata
gcttacggcctgctcttccaccccaacgcctacctgaggaacggctggaatctgctcgac
ttcatcattgtagtagtagggttattcagcgcgattttggagcaggccacaaagggagat
ggggccactccgattggagggaaggcagcaggtttcgatgtcaaggctctgcgggcattc
agagtactaagaccgctcagactggtctctggagtacccagtttacaagtcgtgttgaac
tccataatcaaagccatggttcctctgctccacattgccctcctggtcctcttcgtcatc
atcatctatgccatcatcggcctggagctcttcatgggcaagatgcacaagacctgcatt
tacagccattcaggtacaaatgcagaggaaaaaccagcaccatgtgcacctgacggcgct
tacggtcggcactgcatgcagaacggaacgaagtgccaagtgggctgggaaggcccaaat
gatggaatcaccaactttgacaactttgcctttgccatgctgacagtgttccagtgtata
accatggaaggctggacggacgtgttatactggatgcaggatgctatgggctatgagctg
ccatgggtctattttgtctctcttgtcatctttggctcatttttcgttctcaacctcgtt
ctgggtgtgttgagcggagagttttccaaggaaagagagaaagccaaagcacgtggtgac
ttccagaaactacgagaaaaacagcaactggaggaggaccttaagggctatttagactgg
atcactcaggctgaagacatcgacccagagaatgaagaggagggcttggacgatgacaaa
cccagaaactgtaaaggtcgacattttctctctctgcgtggagccgtgaagaaaaacgcg
gctttccttcgtaaggcgttgagcatgccagccagtgaaaacgaatcagtcaacacggat
aacgctcccgggggagacgtggagggggagacctgctgcaccagactggcaattaggatc
tccaaatccaagttcagtcgctactctcggaggtggaacaggttgtgtaggcgaaagtgt
cgagcagcagtcaagtcccaggttttctattggctggtcatcttcctggtttttctcaac
accctgaccatcgcctctgaacatcacaagcagcctcagtggctaacagacgtgcaagat
atagcaaataaagtattactagcactcttcactggtgagatgctcctaaagatgtacagt
ctaggtctacaggcgtacttcgtgtcactcttcaacaggttcgacagcttcgtcgtgtgt
gggggaatactagagaccattctcgtagaaacaaagatcatgtctcctcttggcatctca
gtgttgcgttgcgtacgcctgttgagaatatttaaaatcacaagatactggaactctctc
tccaacctcgtggcctccctactcaactccgttcgttccattgcctccctgctgctcctg
ctcttcctcttcattatcatcttctccctgctgggcatgcagctcttcggggggaaattt
aactttgacgacaccagacggagcacctttgacaactttccccagtctctgctcactgtg
ttccagattttaacaggagaagactggaactctgttatgtatgacggcatcatggcgtat
ggaggcccgtcttttcctggcatgctggtctgcatctactttatcatcctcttcatctgc
ggaaactacatcctactgaatgtcttcttggccatcgctgtcgataatctagcagatgct
gagagtctgacatcggctcagaaagaagaggaggaggcaaaggagaggaaaaaactggcc
aggcttgccagtccagaaaagcgtcatgataacgagaagccaccgatagaggaaaagaag
agtgagaagatcgagttgaagtccatcacttctgatggagaaaccaacactgcaaccaag
atcaacatggatgactgctgtggagatgaaaatgaagagaagaacccatatcctgtgaat
gattacataggagatgaggatgaggatgagccggagatgccagtgggtccgaggccgcgg
ccgctctctgacattcagctgaaagagaaggccattcccatgcctgaggcccgcgccttc
ttcatcttcagccacaccaacaaattcagggttctgtgccacaagatcgtcaaccacaac
atcttcaccaatctcatcctattcttcatcctgctcagcagcatcagtctggcggcagag
gatccggtcaagaacgactctttcagaaatcagatcttgggctatgcagatcacgtcttc
actggacttttcaccattgagatcattcttaagatgacagcctatggagccttcctccat
aaaggttcattctgtagaaattatttcaacatcctggacttagtagtggtcagcgtttct
ctcatctcttctggaatacaactagacttctcgacgtccagtgcaattaatgttgtaaag
atcctgagagtcctgcgagtgctgagaccgctgagagccatcaacagagccaaaggacta
aagcatgtcgtgcagtgtgtttttgtggccatcagaaccattggcaacatcgtcatcgtc
actacattgctccagtttatgtttgcttgtattggagtgcagctattcaagggcaagttc
tcctactgtagtgacagctccaaacagactcaggcagagtgcagaggtttctacatcatg
tataaggatggagatgtggggaaaccagaaaaagcccatagaaaatgggaaaacagcgac
ttcaactttgatgatgtcctgcagggaatgatggctttgtttgccgtgtctacgtttgag
ggctggcctgggttgctgtaccgagccatagactctcacgctgaagatgtcggtccaatc
tacaactaccgcgtggtcatttctatcttcttcatcatctacatcattatcatcgccttt
ttcatgatgaacattttcgtcggtttcgtcatcgtcacatttcaggagcaaggagagcag
gagtataagaactgtgagctggacaagaaccagcgtcagtgtgtggaatacgccctgaag
gcccgacctctacgtcgctacatccccaagaacccttaccagtacaaggtgtggtatgtg
gtcaactctacctacttcgagtacctgatgttcactctcatcctcctcaacaccatctgt
ctggccatgcagcaccatggacagactaaaaacttcaacgatgcaatgaacatcctcaac
atgctcttcacaggactgttcacagtagagatgatcctaaagttaatcgccttcaagccc
agggggtactttagtgatccctggaatgtgtttgatttcctcatcgtaattggcagcata
atagacgtcattctcagtgagatcaacccagctgaatcgtcctcgtcctcctcctcctct
tcgtcctcctcttcctcttcttcttcctctcacccccatgtggtaaggccaatgggactt
cagaattctgaagagaacgccaggatctccatcaccttcttccggctgttccgcgtgatg
aggctggtgaagctgctatctcgcggggaagggattcggaccctgctgtggaccttcatc
aaatctttccaagctctgccttatgtagctctgctaatagtgatgctcttcttcatatac
gccgtcatcggtatgcagatgtttggtaagatagcgctgcgggacaacacgcaaatcaac
aggaacaacaatttccagacgttccctcaggcagtgctgctgctcttcagatgtgcaact
ggtgaggcatggcaagagatcatgctggcgtgttcgcccaatcacccatgcgagaaaggg
tcaaccaatgaaaacagcacaaaccatgatgattgtggcagccagtttgccatcatttac
tttgtcagcttctacatgctgtgtgcctttctgatcatcaacctttttgtggctgtaata
atggacaactttgactatctgacacgtgactggtcaattttggggcctcatcatcttgat
gagttcaagagaatctgggccgaatacgacccagaggctaaggggaggataaaacacctt
gatgtggtcaccttgctccggagaattcagcctcccctcggctttggaaagctctgtcca
cacagggtggcatgtaagcgcctggtatcgatgaatatgcctctgaacagcgatggaacg
gttatgttcaatgccacactgtttgctttggtcagaactgcactcaggatcaagacagaa
ggtaatctggagcaggctaacgaggagctaagagcaattgtgaaaaagatctggaagaga
actagcatgaagctgttggatcaagtagtgccccctgctggtgatgatgaagtaacagtt
ggaaagttctacgccaccttcctcatccaagaatatttccgcaagtttaagaagagaaaa
gaacaaggcctggtggccaaggtgcctcccaaaactgccctttctctgcaggcgggcctg
cggacgcttcatgacattggaccagagatcagaagggccatctctggagacttgaacgtg
gaggaggagatagataaaggcatgaaggaatccgtgtcagctgcatctgaggacgatatc
ttcaggcgaacgggtggcttgtttggcaaccacgtcaactactacaaccagactgacggc
cgtgggtcctttccgcagtccttcacaactcaacgtcccttgcacataagtcagaaaggc
tctccgtgcgaaggggaaagcccatcacacgagaagctgatggactcaaccacattcacc
ccttcatcatactcctcatcaggttcaaacgccaacatcaacaacgccaataacactgga
atggctggagtgacgacccagggcgtcagtcgattcccaagtccgtccataagcacggtg
gatgggcacacagaccagcccctcacacccatcctactacctagatcagcctggtgtttc
cctccaaaaaggatgttttatgacaccctcatgcgctcggactcgagtgacagtcgtctg
ccaatcatccagagaggggaggggtcaacagaggagacgtacgatgagagttatggtgac
gacagggagtaccaggacgatgagcactcactttcttctgacatgttggtgtatcatgat
gaaacatgtaaacagctcactcctatggaggaaacagaagaagtaggggagcaaaaagga
ggagggtggcagtctccacgaagagtcttcctctgtccaactaccctgacacggagatct
tccttccatctggagtgtctccggaggcagacaaggccagatgtctcgcagaagactgct
gtacctttacatcttgtacatcaccaggctcttgcagtggcaggtttgagtccccttttg
agaaggagtcactcacctaccctcttcagccgactgtgttccacgcctgcagctaacccc
acagaccaatgcggtgatgcctcctaccagcgagttccttctctaagactagagggctcc
aactctcatgagaagctcaataccagcctgccttctgtaaattgtgggccctggtacaac
gacagtaatgggaatagcccagtggacagtccgagccccacgccggttcccagtcaaagg
gcaccacggccggtgtcactcactgtaccatcgctcttggggaaggaccccagctcgctg
tctcatggcagtgcaggcagtctagtggaagcggttcttatatcagaaggtttgggtcat
tttgcccaggacccttctttcattgaggcaaccaaagccgagttagctgatgcctgcgac
atgaccatcgaggagatggagcatgcagccagcaacattctcaacagcaacaccgccaca
aaccccacatcaagcacctcttccacctctcagcacagccctaacggcagcctcccctgc
cacaatgcagcagcagctgcaacgcacagggaccgagtcgccggcctgagtcccggcgat
gcaggggcagaggctggagggggccggggctacatccacggtccatcctctatagaggag
cgacaggaactgctagctagaggggcagggcgagaagaggaggaggaagagccaaatgtg
agagaagagaggccccacagaagttcagctgtggtggcaggagcacggcagaagaacagc
aggcttttggaggatgaggatttggagtgtgtgacgagcttgtag
DBGET
integrated database retrieval system
