Pimephales promelas (fathead minnow): 120460570
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Entry
120460570 CDS
T08155
Name
(RefSeq) transcription elongation regulator 1-like isoform X1
KO
K12824
transcription elongation regulator 1
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120460570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pprm03041
]
120460570
Spliceosome [BR:
pprm03041
]
Complex A
U1 snRNP components
U1 related factors
120460570
Complex B
120460570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
120460570
NCBI-ProteinID:
XP_039504330
LinkDB
All DBs
Position
Unknown
AA seq
1013 aa
AA seq
DB search
MAEHTEAEGIGLAANSMTQQPALRFPATAPPSASTSTRRQPLLSTPVPPFAMMRGPPPAA
RPPFGRIPFDPSVPPPMGAPPLQRPPFMPPPGGSMPPPPGMIFPPGIQPTASPAPSPTPP
SLPSTEEIWVENKSPDGKVYYYNARTRESSWTKPEGVKVIQQAELGPMMLSQAAAAAAAA
SGASTGPGPSISLPASVTTATLTSQSPSTSMSSISSPSITAVSPLLPTPVSAPDIVEMPS
VVTTTPSPMATPIAAVNPPTVTVSMTAGPPPLPVALSHTVPQPTAPMQGFPPVMVPPFRV
PLPAMPIPLPGVAMMQIVSCPYVKTISPTKNGMLHGMAPPLVPMMPHQMAMAGPSGLSGA
LSTSEWSEFKTQEGKSYYYNKHTQETTWDKPEEIKETEKESEKIKDAAVDMIDAEIMDME
DESPKIHPPKEQKEELKDEEMTEEQKAAKKAKPVATTPIPGTPWCVVWTGDERVFFYNPT
TRLSMWERPEELVGRVDVDKAIQEPLHKRGLDNSHKMVLAKEEQEFAIADDIPDDEPSKA
KKRKIEEKKEVDSEREAAMEAELKAARERAVVPQEARMSQFKDMLLERGVSAFSTWDKEL
HKIVFDPRYLLLNPKERKQVFDQYVKTRAEEERKEKKNKIMQVKDDFRKMMEEAKLGVRT
TFSEFAAKHARDSRFKAVEKMKDREAIFIEFMTAFRKKEKENSKNRGEKVKQDFFELLSD
YHVDGQQRWSKVKEKMETDPRYKAVETSAAREELFKNYVERLAKNPNSEKEKELEKQARI
EASLRERERMVQRFRSEQTKEIDREREQHKREEAVQHFKALMSDMVKTPDAAWSDTRRSL
RKDHRWESSSLLERDEKERLFNEHIEALAKKKKEHFRQLLDETTSITLMTSWKEVKKLIK
EDPRCIKFSSSDRKRQREFSDYVKDKYITAKADFRTLLKETKFITYKSHKLMQESEQHLS
DIEKILEKDKRYLVLDCMSEERHKLLMGYVEELDRRGPPPPPTAFEPARRSTK
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcacacggaggcagaaggcattggcctggccgctaacagcatgacccagcag
ccagcactgcgtttccctgccactgcacctccatctgccagcacctccacccgcaggcag
cctttactgagcacccctgtgcctccctttgctatgatgaggggtcctccacccgctgcc
cgcccgcccttcggacggatcccctttgaccccagtgtgccccctccaatgggtgcccca
cctttacagagacccccatttatgcctccgcccggaggatccatgccacctccacctggc
atgatttttcctccaggaatacaacctacagcctctcctgctccttctcctactcctcct
tctctgccctctacagaagagatctgggtggagaataagagtccagatggaaaggtgtat
tattacaatgcacgtacaagggagtcgtcctggacgaagcctgaaggtgtgaaagtgatc
cagcaggctgagttgggtccaatgatgctgagccaggcagcggcggcggcagcagcagcc
agtggagcttccaccgggcccggtccttccatcagcctcccagcttcagtcactacagcc
acactcacctcccagagcccctccacatccatgagctccatttcctctcccagcatcaca
gcagtctcacctctcctcccaacacctgtatcagcccctgacatagtggagatgccgtca
gttgtaaccacaacccccagtcctatggcaaccccaattgcagctgttaatccgccaacg
gttacggtctccatgactgcaggacctccacctctgccggtggcattgtctcatactgtg
ccacagcccactgctccaatgcaagggttccctcctgtcatggtaccacccttcagagtg
cccctgcctgccatgcccattcccctgcccggtgtagcaatgatgcagatagtcagctgt
ccctatgtaaagactatctctcctaccaaaaacggtatgcttcatggcatggcaccacct
ttagtacccatgatgccccatcaaatggcgatggccgggccttcaggactgtctggagct
ctgagtacatccgagtggtctgagttcaaaacccaagagggaaagtcctattactacaat
aaacacacacaggagaccacctgggacaaaccagaagagatcaaagagacagaaaaagag
agtgagaagatcaaggatgcagctgttgacatgattgatgctgaaatcatggacatggaa
gatgaaagcccaaaaatccacccaccaaaagagcagaaagaggagctgaaagatgaagag
atgacagaggaacagaaggcagcgaaaaaagcaaagcctgtagcaaccacgcctattcct
ggcacgccatggtgtgtggtgtggacgggcgacgagcgggtgttcttttataaccccacc
acacgtctgtccatgtgggagcgaccagaggagctggtggggcgggttgacgtagataaa
gcgattcaggaacctctgcacaaaagaggcctggacaacagccacaaaatggtgttggct
aaagaggaacaggagttcgctattgcagatgacatacctgatgatgaacccagtaaggcc
aagaaacgaaagatagaggagaagaaagaggtcgactcggaaagggaggcagccatggag
gctgagctgaaggcagcgcgcgagagagccgtggtacctcaggaagctcggatgagtcaa
tttaaagacatgctgctcgagcgaggggtttctgcattctctacctgggataaggagctt
cataagattgtattcgatccacgttatctgctgctcaatcctaaagagaggaaacaggtg
tttgatcagtatgtgaagacacgtgctgaggaggagaggaaagagaaaaagaataaaatc
atgcaggtcaaagatgacttcaggaaaatgatggaggaggctaaacttggtgtcagaaca
actttcagtgagtttgctgccaaacatgccagggattcacgttttaaggccgttgaaaag
atgaaagacagagaagccattttcatcgaatttatgaccgccttcagaaagaaagagaaa
gagaactcaaagaaccgtggggagaaggttaagcaagacttttttgagctcctgtcagat
taccatgtggatggtcagcagcgctggagcaaagtgaaggaaaagatggagactgaccct
cgttataaggctgtggaaacctctgcagctcgagaggaactcttcaagaactatgtggag
cgtctggccaagaatccaaactctgagaaagagaaagagctagagaaacaggcccggata
gaggccagtctgagggaaagagagcggatggtgcagagattccgctcggagcaaaccaaa
gagattgaccgtgagagagagcagcacaaaagggaggaggccgtgcagcattttaaagca
ctcatgtctgatatggtaaagacgcctgatgccgcctggtcagacacgcgtcgtagcctg
aggaaggatcatcgctgggagtcatcctcattgctggagagggatgagaaagagaggctc
ttcaatgaacacattgaggctcttgcaaagaagaaaaaggagcattttcgccaacttctg
gacgaaacgacctcgatcactttgatgacgtcatggaaggaagtgaagaaactcattaaa
gaagatccgagatgcatcaagttttcaagcagtgacagaaaaagacagagggagtttagt
gattacgttaaagacaagtacatcacggccaaagcagacttcagaactctcctgaaagag
accaagttcatcacctacaaatcacacaagttgatgcaggagtcagagcagcacttgtcg
gacattgagaagatcttggaaaaggataaaaggtatctggttctggactgtatgtcagaa
gagaggcacaaacttcttatgggatatgtggaggagctagaccgcaggggaccacctcct
cctcccactgcctttgaacctgctcgacgctccactaaatga
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