Pimephales promelas (fathead minnow): 120460694
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Entry
120460694 CDS
T08155
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120460694 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pprm02000
]
120460694 (slc6a11b)
Transporters [BR:
pprm02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
120460694 (slc6a11b)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
120460694
NCBI-ProteinID:
XP_039504544
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MTAEKTIPIINGKADETMDPEAPSPSAVRSNDKKVVNERGQWNNKIEFVLSVAGEIIGLG
NVWRFPYLCYKNGGGAFFVPYVIFFVCCGIPVFFLETALGQFTSEGGITCWRKVCPLFEG
IGYATQVIEAHLNVYYVVILAWAIFYLFNCFTSELPWASCGHYWNTENCVDFNNESIANF
TNPYSTSPVIEFWERRVLKISSGIEEVGGLRWELAFCLLLAWIICYFCIWKGPKSTGKVV
YVTATFPYFMLLILLIRGITLPGAANGIKFYLYPDMSRLSDPQVWVDAGTQIFFSYAICL
GCLTALGSYNSYNNNCYRDCLMLCCLNSGTSFVAGFAIFSVLGFMAYEQNVPIEAVAESG
PGLAFIAYPKAVTMMPWSPLWACLFFMMLIFLGLDSQFVCVESLVTAIIDMYPKTFRVGY
RRELLILGMSVVSFFLGLIMLTEGGMYVFQLFDAYAASGMCLLFVAIFESICIGWIYGAD
RFYSNIEDMIGYKPIFFIKWCWKYFTPGICAGIFLFFLIKYKPLMYNNVYTYPDWGYGIG
WMMAMSSMVCIPVGIVVQIWKTKGTFRERIKKLTTPSADLKMRGRVASRGPCAINDADAK
TRADGKISTITEKETHF
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgaaaagacgatccccataataaatggaaaagcagatgaaacgatggacccc
gaagcgccgagcccgagcgcggtgcgcagcaatgataagaaggtggtgaacgagagagga
cagtggaataataagattgagtttgtgctgtcagtggctggagagattatcggtcttggc
aacgtttggaggttcccatatctgtgttacaagaacggcggaggtgctttctttgtgcct
tatgtcatcttcttcgtctgctgtgggatcccagtcttcttcctggaaacagcactaggt
cagttcacaagtgaagggggcatcacatgttggagaaaagtctgcccactctttgaaggc
attggttatgcgacccaagtcatcgaagcccacctgaatgtttattatgtggtaatattg
gcttgggccattttctacctgttcaactgctttacatcagagctgccctgggcgtcttgt
ggtcactactggaatacggaaaactgtgtggattttaacaatgaaagcattgccaacttc
accaacccatattccacatcaccagtcattgagttttgggaacgccgtgttctcaagata
tcctctggaattgaagaagttggcggtcttcgctgggagctcgctttctgtctacttcta
gcttggatcatatgctatttctgtatttggaaaggtccaaagtcaactggaaaggtggtg
tatgtcactgcaacctttccttatttcatgctgttgatccttcttattcgaggaatcaca
ctgccaggagctgcaaatggaattaaattctacctgtaccctgatatgtctcgtctgtca
gatcctcaggtgtgggtggatgcaggcactcagatcttcttctcgtatgctatatgtctg
ggttgtttaacggctctcgggagctacaacagctacaacaacaactgctacagggattgc
ctcatgctgtgctgtctgaacagtggcacgagttttgtggcaggatttgccatcttctcc
gtcttgggcttcatggcgtatgaacagaatgtgccaatagaggcagtggcagagtcaggt
cctggtctggcgtttatagcgtaccctaaggctgtgaccatgatgccgtggtctccactg
tgggcctgcctcttcttcatgatgctcatcttccttggactcgacagtcagtttgtgtgt
gtggagagtcttgtgacagcgatcatcgacatgtatcccaaaaccttccgcgtgggatat
cggagagagcttctcattctgggaatgtctgtggtctccttcttcctggggctaataatg
ttgacagagggtggcatgtacgtgttccagctctttgacgcgtatgcagccagtggcatg
tgtctgctgttcgttgccatctttgagtcaatctgcattggctggatttatggtgccgac
aggttttattcgaacattgaggacatgattggatacaagccaatcttcttcatcaaatgg
tgctggaagtacttcacacccggcatctgtgctggcatctttctgttcttcttgatcaag
tacaaacctctgatgtataataatgtgtacacgtatccagactggggttatgggatcggc
tggatgatggccatgtcctctatggtatgcattcctgtgggaatcgtagtccagatctgg
aaaacgaaaggaactttccgtgagaggatcaagaagctgaccacacccagcgctgatctg
aaaatgaggggacgcgtcgcctccaggggtccttgcgctatcaatgatgctgatgccaaa
acgagggccgatggcaagatctccaccatcacagaaaaggagacacatttctaa
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