Pimephales promelas (fathead minnow): 120461358
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Entry
120461358 CDS
T08155
Symbol
znf827
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger protein 827
KO
K27104
zinc finger protein 827
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120461358 (znf827)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120461358 (znf827)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-H2C2_5
zf-C2H2_16
zf-C2H2_4
zf-C2H2_6
zf-C2H2_jaz
CENP-N
zf-C2H2_15
zf-met
Motif
Other DBs
NCBI-GeneID:
120461358
NCBI-ProteinID:
XP_039505439
LinkDB
All DBs
Position
Unknown
AA seq
1420 aa
AA seq
DB search
MPRRKQEQPKRLPSHVDTVEDGGPEGGSVEEDSWFGNTSDSPSESSYGDVQDDLRVSPDN
VPQPDHDTSAENSLGCPTPVQRASLELLGLDGGVLSTQDTLSSMVSSIYGDSSHALGKPL
SSNLRRLLEAGSLKLEGGELTGRGTGRGPESPPVSLVLSASSHHAQQLSALARRLANSSN
NSGNSNSASPASVATVKQEPCDPYGPSNGPNSGSSGFVWVGVADKWPSASCSAPSGSSLS
PDSAIQKLKAAANAVLQDKSTVASSTSASSSSSSSSSSSSVTSSSMAALGTRSDDAVRFE
PFASPFSPQSASSTLAALSKKVSERSQQQVGSSEHQPSAGSFLSLVSMTSSAALLKEVAA
RAAGNLLADKKESALVLGASEDVKPLLDRNQKVPTPTQAMDLLLPTIPKGRAKPSSQAGS
PEDGGKPFQCPVCGLVIKRKSYWKRHMVIHTGLKSHQCPLCPFRCARKDNLKSHMKVHQH
QDRGETFQCELCPFTSSRHFSLKLHMRCHQHFPRPDLKVKEEPGTDTEEGEGLLMGDSGD
QVMNTDASTSPTVSQHDGRLLASPNEPSNHIQIKEEPQERDVSVMSPFALCRERPSSSSS
SLDLSGLKSSPPGPGPTAPSLFSPDITTKTATDLLMKLSAANQKETLKGSFCVKEEPQAE
EPLSSQRGSSYSFCQEGPPGAIKQQEEGSPMLGKSILLSQDINVKVASELLMKLSENNKD
ACIQNVIVKAEPMEVDPPLELAPPSSHLLGFGTSGACEKKEPMVNLPDPLPRPQNDLFSQ
DISVKMASELLFKLSEKVSRANENKDNASFGIHSPFLDDRFRQSPFSTRSKSSSPAEAGS
SSRVAQQDPDKVGSEPGNGLTQWRLNEQLFPCTVCGKVFGRQQTLSRHLSLHTEERKYKC
HLCPYAAKCRANLNQHLTIHSVKLVNTDAEQIVTAVTNDGPELKNCPYYYSCHVCGFQTE
FNAQFVSHMSLHVDKEQWMFSLCCSTCEYVAVDEAEMKAHISAGHAGLNSRSPLSETKST
SSSLSALSDSLNSSEGGDVAKGNEELKSLLAPPSSVGSQSSSGPGTDEKAEKGFECVFCN
FVCKTRPMYERHLQIHLITRMFECDVCHKFMKTPEQLLEHKKCHTVPAGGLKCPLCIYST
NRPAAMEGHLKTHYKMEYRCRICQAVWANQAELERHTRAHRLGNHYKCEQCGYLSKTANK
LIEHVRVHTGERPFHCDRCSYSCKRKDNLNLHKRLKHAPRQTFGCAQCPFTTTHPFVYSR
HVKKHQGGEGSAEEGEARPGTPRPGLLERGGSSSGSGDSGSTSPLMNLSASQALQSVALS
ITSKQQDGTXTRYLSANGTFSTLAARYLEQYRNCDLAHLIPLTTLFTARRFTFHSPSPSN
SSPPFSAFWSNSSSQSPPSPTSLKHSFLAYLGLTERAKTI
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgccaaggaggaaacaggagcaacccaagcgcctgccttcacatgtggacacggtagag
gatggagggccagagggtgggtcagtggaggaggacagctggtttggaaatacctcagac
agcccctctgaatcgtcctacggtgatgtgcaagatgacctgcgggtttccccggataat
gttccccaaccagaccacgacacctcagcagagaactccctgggctgcccgacaccagtt
cagcgggcttccctggagcttctggggttggacggtggggtcctctcgacccaggacacg
ctgtcctcgatggtgtcctctatttacggagactccagccatgccctgggcaagcccctc
agcagcaacctgcggcgtctcctggaggctggctcactgaagctagagggaggggagctg
accgggcgtggaacgggcagaggaccagagtcacctccagtcagcttggtactatctgcg
tcttcgcatcacgcacaacagctgagtgccttggcaaggaggctggctaacagcagcaac
aacagtggtaactcgaactctgcatcacccgcatctgtagcaactgtcaagcaagagccc
tgtgacccgtacggccccagcaacggccctaactcaggcagcagtggctttgtatgggta
ggcgttgcagataaatggccatcggctagttgctcggcacccagtggcagcagcctgtca
ccagactcggccatccaaaagttaaaggcagccgctaatgccgtgctgcaagacaagagc
acggtggcgtcctccacttctgcgtcttcgtcctcctcttcctcctcctcctcctcttcg
gtcacctcctcctcaatggcagccctgggcactcgctctgatgatgcggtgcggtttgaa
ccatttgcttcacccttcagtccacagtcagccagctccacgcttgctgccctctcaaag
aaagtgtctgaaagaagtcagcagcaggtgggctcatcagagcatcaaccctcagctggc
tcctttctctctctggtttccatgacctcctcagcagctctgctaaaggaggtggctgcg
cgagcagcagggaaccttctagctgacaagaaagagtcggctttagtactgggagcctcc
gaagatgtcaagcccctgttagataggaaccagaaggtgcccaccccaacccaggccatg
gatcttctgctgccaacaatccccaagggaagggccaagcccagcagtcaagcaggatct
cctgaggatggaggaaagccctttcagtgcccggtatgcggtctggtgatcaagagaaag
agctactggaagagacatatggtgatccacacgggcttaaaaagccaccagtgtcccctc
tgtccctttcgctgtgctcgtaaagacaatctcaaatcccacatgaaggtccatcagcac
caagaccgaggggagacctttcagtgtgagctctgccccttcacatcctcccgccacttt
agcctcaagctgcacatgcgttgccatcagcacttccctcgtcccgacctcaaagtcaaa
gaagaacccggcacagacacggaggagggcgagggcttgctcatgggggacagtggcgac
caggtcatgaacacagatgcttccacgtctcccactgtgagccaacacgacggtcgtttg
ctggcgtcccccaatgaaccctcgaaccacatccagatcaaggaggaaccccaagagagg
gatgtgtctgtgatgtctccctttgccctgtgtagggagcgacccagtagcagcagtagt
tctctggatctgtcggggctcaaatccagtccaccagggcctggacctacagctccctcg
cttttcagcccagatatcaccaccaaaactgctacggacctcctcatgaagctctcagca
gctaaccagaaggagaccctaaagggttcattctgtgtcaaggaggagccccaggcggaa
gagcccctgagctctcagagaggatccagctacagcttctgccaagaaggacccccaggg
gccatcaagcagcaagaggaggggagcccgatgttgggcaagagcatcctactcagccag
gacatcaacgtcaaagtagcttctgaactgcttatgaagctctcagagaataacaaagac
gcttgcatacagaacgtcatagtgaaggcggagcctatggaagtggacccgcccctagaa
ttggccccaccctcctctcatctgctgggctttggcacttcaggagcatgtgagaagaaa
gagccaatggtcaacctcccagatcccttgccccgcccccaaaatgaccttttctcccaa
gacatatcagtcaaaatggcctctgagctgcttttcaaattgtctgaaaaagtaagtaga
gcaaacgaaaacaaagacaatgcatcattcggcatacacagccctttcctagacgaccgc
tttagacaatcacctttcagcacgcgctccaagagctcttccccagctgaagccggatca
tcaagcagggttgcccagcaagatccagacaaggtgggtagtgagccaggaaatggactt
acccaatggagactcaatgaacagctctttccctgcactgtatgtggcaaagtgtttggt
cgccaacagactctctccaggcatctctcactacacacagaagagaggaagtataagtgt
catttgtgtccatatgcagctaagtgcagagccaacctcaaccagcacctcaccatccac
tcagtcaaactggtgaacacagatgctgagcagattgttactgctgtgaccaacgatggc
ccagagctcaaaaactgcccctactactacagctgccatgtctgcggcttccaaacagag
tttaacgctcagtttgttagtcatatgtctcttcatgtggacaaagagcagtggatgttc
tctctctgctgtagcacctgtgagtatgtggcggtggacgaggccgagatgaaagctcac
atcagtgcagggcatgcaggtctcaattccagaagccctctcagtgagaccaagagcacg
tcctcctctctctcagccctcagcgactccctcaatagctctgaaggtggagatgttgcc
aaaggtaacgaagaactaaaaagccttttagctccgccttcttctgtgggcagccaatca
agctcaggccctggaacagatgaaaaagcagagaaaggctttgaatgtgttttctgcaac
tttgtgtgtaaaactcggcccatgtacgagcggcacctacagatccacctgatcacgcgt
atgtttgagtgcgacgtctgccacaagttcatgaagacccccgagcagctcttggagcac
aagaagtgccacaccgtccccgctggagggctcaagtgccctctctgcatctactccact
aacaggccagccgccatggagggccacctgaagacgcactacaagatggagtatcgctgc
cgcatctgccaagccgtgtgggccaatcaggcagagctggaaaggcacacacgtgctcac
cgcctgggcaaccactacaagtgcgagcagtgtggctacctctccaaaacagccaacaag
ctcatcgagcatgtgcgcgtgcacaccggcgagcggcctttccactgcgaccgctgcagc
tacagctgcaaacgcaaggacaatctcaacctccacaagcggctcaagcatgcgccgaga
cagaccttcggttgcgcccagtgcccgttcaccacgactcacccgtttgtctacagccgc
cacgttaaaaagcaccaaggcggggaggggagcgccgaggaaggtgaggcccggccaggt
actccacgcccgggccttttggagcgaggtgggagcagcagcgggagcggggacagcggg
agcaccagtccgctcatgaacctgtccgcttctcaagccttgcagtccgtcgccctgtca
atcaccagcaagcagcaagacggcacgnncacgcgctacctctcggccaacggcacgttc
tccacactggcggctcgctacttggaacagtacaggaactgtgacctggctcacctcatc
cccctcaccacgctctttacggcccggcgcttcacattccacagcccctcaccctcaaac
tcctcaccgcccttctcggcattctggtccaactcgtcctctcagtcaccgccctctccc
acgtcactgaaacactccttcctggcataccttggactgacagagagagcgaagaccatt
tga
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integrated database retrieval system
