Pimephales promelas (fathead minnow): 120462851
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Entry
120462851 CDS
T08155
Symbol
si:rp71-17i16.4
Name
(RefSeq) troponin C, skeletal muscle
KO
K12042
troponin C, skeletal muscle
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04020
Calcium signaling pathway
pprm04814
Motor proteins
pprm04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120462851 (si:rp71-17i16.4)
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120462851 (si:rp71-17i16.4)
04820 Cytoskeleton in muscle cells
120462851 (si:rp71-17i16.4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pprm04812
]
120462851 (si:rp71-17i16.4)
Cytoskeleton proteins [BR:
pprm04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
120462851 (si:rp71-17i16.4)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_9
EF-hand_FSTL1
AIF-1
EH
SPARC_Ca_bdg
EF-hand_11
SAPC2_N
EF_EFCAB10_C
SPEF2_C
p25-alpha
EF-hand_EFHB_C
CDI_toxin_EC869_like
DUF5580_M
EF-hand_STIM1
Motif
Other DBs
NCBI-GeneID:
120462851
NCBI-ProteinID:
XP_039507481
LinkDB
All DBs
Position
Unknown
AA seq
161 aa
AA seq
DB search
MPTDAQADARSFLSEEMISEFKAAFDMFDTDGGGDISTKELGTVMRMLGQNPTREELDAI
IEEVDEDGSGTIDFEEFLVMMVQQLKEDQAGKSEEELSECFRVFDKNQDGFIDREEFGDI
MRATGEPLAEEDIDELMADADTNKDGKIDFDEFLKMMENVQ
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgcccactgatgcccaggcagacgcccgctctttcctgagtgaggaaatgatttctgag
ttcaaggctgccttcgacatgttcgacaccgatgggggcggtgatatcagcaccaaggag
ttgggtaccgtcatgaggatgttgggtcagaacccaaccagagaggagctggatgccatc
attgaagaagttgatgaagatggcagtggcactatcgactttgaggagtttttggtcatg
atggtgcagcagctaaaagaagatcaagctggcaaatccgaagaggagctatctgaatgc
ttccgtgtctttgacaagaaccaagatggattcattgatcgtgaggagtttggggatatc
atgcgcgccactggcgagccattggcagaagaagacatagatgaactcatggcagatgcg
gacacaaacaaagatggaaagattgattttgatgagtttcttaaaatgatggagaacgtc
cagtaa
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integrated database retrieval system