Pimephales promelas (fathead minnow): 120474121
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Entry
120474121 CDS
T08155
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-2-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120474121
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120474121
Ion channels [BR:
pprm04040
]
Ligand-gated channels
GABA-A
120474121
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
120474121
NCBI-ProteinID:
XP_039520253
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MLSILSFSMNAAFLLLCVSVCGHCGKMKLGVRRTSGQHHNHGTPLFKKTLDETKTHPLRS
DHLLRVDDHDFTMRPEFAGPAVPVGVDVQVESLDSISEVDMDFTMTLYLRHYWKDERLSF
PSKTNKSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTTENIMIRVYPDGHVLYSLRVTVT
SACNMDFSRFPLDTQTCTLELESYAYTDEDLMLYWKSGDESLSTDDKISLSQFLIQKFHT
TSRLAFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVS
LGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVLEYAAVNYLTTVHDGK
DRKLREKPLPHTRTMLLDDAYGKSDVNGLAGYTQGPVSSGDKQEHMVVCLSLANEATAAK
KKTLRGFRIIQNTHAIDAYSRMIFPGAFIFFNLIYWSVYC
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctatcctctccttcagtatgaacgctgcttttcttctgctgtgcgtgagtgtg
tgcgggcactgcgggaagatgaagctcggcgtcaggagaacatctggacaacatcacaat
cacggaactccgcttttcaagaagacgttggatgaaaccaagacgcatccgctgagatca
gaccatctgctgcgtgttgatgatcatgacttcactatgagacccgaatttgcaggtcca
gcagtgccagtgggtgtggatgtacaggtggagagtttggacagcatctcagaagtagat
atggacttcaccatgaccctgtacctgagacactactggaaggacgagcgactatctttt
cccagtaaaaccaataaaagcatgacttttgatggtcgattggtgaaaaaaatctgggtt
cctgacgtgttctttgtccattccaaacgatccttcatccacgacaccaccacggagaac
atcatgatcagggtgtaccccgacggacacgtgctctacagcctcagggtgactgtaact
tcagcgtgtaatatggacttcagccggttcccgttggacacgcagacctgcacgttagag
ctggagagctatgcctacactgatgaagacctgatgctctactggaagagtggagatgaa
tctctgagcacggatgacaagatctccctgtctcagttcctcattcagaagtttcacacc
acctccagactggccttctacagcagcacaggttggtacaatcgtctgtacatcaacttc
actctgcgtcgccatatcttcttcttcctgcttcagacgtactttcccgccactctgatg
gtcatgctgtcatgggtgtccttctggatcgaccgacgagccgttcctgccagagtctcg
ttaggcattacgacagtgctcaccatgtccaccatcatcactggggtgaacgcctccatg
cccagagtctcctacatcaaagccgtggacatctacctgtgggtcagcttcgtcttcgtc
tttttatcggtacttgagtatgctgccgtaaactacttgaccacagtgcatgatgggaag
gatcgcaagttaagagagaagcctttacctcacacaaggactatgctgctcgatgacgcg
tacggtaagtctgatgtcaatggcctggcaggatatacccaaggtcccgtctcctctggg
gataaacaggaacacatggtggtgtgcctgtctttggcaaatgaggccacagcagccaaa
aagaagaccctcagaggcttccgtatcatccaaaacactcacgccattgatgcctactct
cgcatgatcttccccggggcctttatattcttcaatctcatctattggtctgtgtactgc
tga
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