Pimephales promelas (fathead minnow): 120474215
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Entry
120474215 CDS
T08155
Symbol
setd1ba
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B-A isoform X1
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm00310
Lysine degradation
pprm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120474215 (setd1ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120474215 (setd1ba)
Enzymes [BR:
pprm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
120474215 (setd1ba)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120474215 (setd1ba)
HMT complexes
COMPASS/SET1 complex
120474215 (setd1ba)
COMPASS/SET1 complex (yeast)
120474215 (setd1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
120474215
NCBI-ProteinID:
XP_039520282
LinkDB
All DBs
Position
Unknown
AA seq
1854 aa
AA seq
DB search
MSRPGERNKLNEDHGKRQSSSLANGMENSHPICNSGEKRNHHWRSYKLIIDPALKKGSHK
LYRYDGLHFSMPNHGMSPVENVRDPRMVRLWAKYKEVDLPVPKFKIDDCYIGRVPPKEVT
FAKLNDNVKEGFLTDMCKKFGDIEGVEILYNPKNKKHLGIAKVVFGTVKSAKDAVQNLHN
TSVMGNIIHVELDPKGENRQRYFQRLINGSYTPLTLPVGGEEACEVSPRSLSEALLACEP
SRRSLEGSSSAVAGTATPGGTNTPMSLDTAYSSLRQDTPQSQGTPHTPRPSGTPFSQDSS
YSSRQGTPAFQPNRAESSGGYKARRHETKFQDAYNRRPERHYVHGTGGTHRGNAEQPPSF
KQHQPPEPPSPVFAHTPPPPASANFKTAFSPYQPPMPPVYPHTEPSFHQPVQREVDYRRP
PQAPPPPSPDFMPVRDRPATPPIPEPPPAPETQPATPPPSTPEPCPSLGTPTQESKRNSL
DSRIEMLLKPFLNERGDSDAEVRMDGSPISSSSSQLSPIPPQRLSRPSSTGLEDISPTPL
PDSDEDEPILGTAALFTNSMAMSPCNMLSKSSAGEPRTPIDKMDMGHQSSGEDMEISDDE
MPGTPIASGDCAKNIVVNSAVSPMQTIPMPPPGFPPLPPPQAGFPLPLPPLPPHSTVSHL
AGPPGVAPHPMLHPLAHYPHGMMPIMQVDLMSSLPQWGSVHMSFQMQTQMLSRMAQSQRQ
YSYPHFISEAAVSAGAAAAAAAAMQFGGTYPPLSMVGAPAGAVGHGQPWPLPNMPKFNPA
VPPPGYEPQKEDPHKATVDGVLMVIVKELKAIMKRDLNRKMVEVVAFRAFDEWWDKQERS
AKATLTPVKTGEGKEEEKERAKPKETISSSLLENWNKVEGLGFEGMGLSIGLRGAIRLPS
FKVKRKQPPEPTSTNDSKRVRPSTPVDDELVDEESERTDLRMDGSRTDGSGSSAKRRPAR
PLELDSEGEEEEETSGKEESSLSDHEEEPVEDASERLPSGKDMEDEEDDEKKSESDSSES
ESSDSSDEASSSSSSKSDSDSSESESSSDYESSSEEEEEEEEEEERVAEIEDEDDDAQTS
SSSSSSSSSTSNEEDLDVKSPITPIGPPPEEEPSELNRLEVLDKAELDHKHSTVSSIKPE
INDVRPPSPKGLPVDEPDIDLEVNIPVPKAETNLDDVGSLRPPTPTGSFADSDQDTRPKI
PAEDVPRTPGRDGPVPLESEAAIPRSLPTPSMHLPLPPNHALEARSLLPSRESLPDMLVR
GRLPTEEDIPRTPGRDLMDRPRGLGKSQSTDTVPVTPGSDAPLTGNSLSSPHIPGSPFSY
PAQSPVLSAGIPRTPGRDLTFTPAFPDSAALSAGLPIHRKASSESLEEKSLFKEPQLSAS
PQASLPNNKASSPFPGPPLPAASLQEPPQGSSPTSAETSSPAAPKDLPVPMIDVPVPLDS
TPSKRKPGRPKSKKLSVEASQDYEEPPAPMVASLPPDLPENDMYPDCPSETFKGEDGDST
ALEEEENQDLTVIPQVEDRMFYDEEPVQKTRRQRRGWQELLLSMHSTVTSPRRPSFLPRS
EFEEMTILYDIWNDGIDEEDMQYLKTTYDKMLEQDNGNDWLNDTLWVHHPPTNMGSATVV
KKKRKEDGIRDHVTGCARSEGYYKIDKKDKMKYLNSSRLQSEESDVDTQGKSIPAQPLTS
TRAGSERRSEQRRLLSSFSCDSDLLKFNQLKFRKKKIRFCRSHIHDWGLFAMEPIAADEM
VIEYVGQNIRQVIADMREKRYEEEGIGSSYMFRVDHDTIIDATKCGNFARFINHSCNPNC
YAKVITVESQKKIVIYSRQPINVNEEITYDYKFPIEDEKIPCLCGAENCRGTLN
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaccaggagaacgaaataagctaaatgaagatcacggtaaaagacagagttca
agtttggcgaacggaatggagaacagccatccgatctgcaattcgggagagaaacgaaat
catcattggagaagttacaagttgattattgacccagcgctgaaaaaggggtcgcacaaa
ctgtatcgctacgatggactgcacttcagcatgccgaaccacgggatgtcacccgtggag
aacgtccgagacccgagaatggttcgtctgtgggctaagtacaaggaggttgatctcccg
gtgcctaaatttaagatcgatgattgttacatcggtcgcgtgccccctaaggaggtcacg
ttcgccaaactcaacgacaacgtcaaagagggatttctcactgacatgtgcaagaagttc
ggcgatattgagggcgtggagattttgtacaacccgaagaacaaaaagcatctcggaata
gctaaagttgtgttcggaactgtcaagtcggcgaaagatgctgtccagaacctgcacaac
acttctgtcatgggcaacatcatccacgtggagctggaccctaaaggtgaaaatcgccaa
aggtacttccagcgtctgatcaatggaagttatactccgctcactcttccagttggtggt
gaagaagcctgtgaagtttctccacgcagcttgtctgaagctctgctggcatgcgagccc
tcgcgaagatcccttgaaggcagttcttctgcagttgcgggcacagccacgccaggtggc
actaatacgcccatgtccctggatacggcctactccagcctaaggcaggatacgccacag
tcccagggtaccccgcacaccccacgcccgtcaggcaccccgttctctcaggactccagc
tactccagcaggcagggcacgccggcgtttcaaccgaaccgtgcggaatcctcgggaggc
tacaaggcgaggagacatgaaaccaaattccaggacgcctacaaccgcagacccgaaaga
cactacgtccatggcacaggagggacgcaccgtggcaatgcagagcaaccacctagtttt
aagcaacatcagccgcccgagcctccgtcgcctgtttttgcacacacaccaccgccacca
gcaagtgcgaatttcaaaactgctttctctccttatcagccaccaatgcccccagtctac
cctcacacagagccctctttccaccagcctgttcagcgggaagtggattataggagaccg
cctcaagccccacctcccccgagccccgacttcatgcccgtcagagacaggcctgcgacg
ccaccaatccccgagcctccccctgcgccagaaacccaacctgctacacctcctccctcc
acgccagagccctgcccgtcgctgggcacccccacccaagagtccaaacgcaacagcctg
gactcccgcatagaaatgctccttaagcccttcctcaacgagcgtggagactcggacgct
gaggtgcgaatggacgggagcccgatctcatcgtcgtcctcgcagctctcccccatcccg
ccccaacggctctcgcggccttcaagcaccggccttgaggacatcagccctaccccgctt
cctgattccgatgaggacgaacccatccttggtactgctgccctgtttacgaactctatg
gccatgtcaccctgcaacatgctcagtaaaagcagtgcaggagaaccacggacgcccata
gacaaaatggacatgggccatcagtcatcgggtgaagacatggagatttctgatgatgag
atgccaggcacaccgattgccagtggggactgtgccaaaaatattgtggtcaactctgcg
gtatctccgatgcagacaattcccatgcccccgccagggttcccccctctgccccctcca
caagctggcttccccctgccgctgcctcctcttccacctcattcaaccgtttcacacctg
gctggcccacctggcgtggccccccatccgatgctacacccattggcccattacccccat
ggcatgatgcccattatgcaggtggacctgatgagctccttaccacagtggggcagtgtt
cacatgtcctttcagatgcagactcagatgctaagtcgcatggcgcagagccaacggcag
tactcgtatcctcatttcatcagcgaagctgctgtaagtgctggtgctgctgctgctgcc
gccgccgccatgcaatttggtggcacgtatccacctctgtctatggtcggtgcccctgca
ggcgctgtggggcatgggcaaccctggcccctacccaacatgcccaagttcaaccctgct
gttccccctcctggctatgagccccaaaaggaagacccacacaaagccactgtggatgga
gtgcttatggttattgtcaaggagctgaaggccatcatgaaaagagatctcaaccgtaag
atggtggaggtggtggccttcagggcgtttgatgaatggtgggacaaacaggagcgatcg
gctaaggctacgcttacacctgtgaagacaggtgagggcaaagaagaggagaaagaacgg
gcaaaacccaaagagactatatcctctagcttactggagaactggaacaaggttgagggt
ctgggctttgagggaatgggtcttagtattggcctgcgcggtgccatccggttaccatcc
ttcaaggttaagaggaaacaaccccctgagccgacatccaccaatgacagcaagagggtg
cgaccatccacacctgtcgatgatgagctggtggatgaagagtcagaaagaacagatctt
cgcatggacggatccagaacggatggcagtggttcttctgccaagcgaaggccagccagg
cctctggagctggacagtgaaggcgaggaggaggaggaaacctccggtaaagaggagtca
tcgctttcagaccatgaagaggagccagtggaagatgcctctgagaggttgccctctggc
aaggatatggaggacgaggaagatgacgaaaagaagagtgaatcagactccagcgagagt
gaatcatctgactcatcagatgaagcttctagctcatcatcctccaaatctgattctgat
tcctctgagagtgagagctcgtccgactatgaatcgagttcagaggaggaagaggaagaa
gaggaggaagaagagcgagtagcggaaatagaggatgaagatgacgacgcacaaacctca
tcatcatcttcatcttcctcatcatcgacctctaatgaagaggatcttgatgtaaaatcc
cccattaccccaataggacctccaccagaagaagaaccaagtgagttgaacagactggag
gttttagacaaggcagagcttgatcacaaacatagtacggtgagctcaatcaagcctgaa
attaatgacgtgcggcccccatcacccaaaggattgccagttgatgaacccgacatcgat
ttggaggtcaatattccagtgcccaaagctgaaaccaacctggatgatgtcggtagcttg
cgcccacccaccccaacaggttcgtttgcagatagtgatcaggacaccagaccaaagatc
cctgcagaagacgtccccagaacccctggccgtgatggcccagttcccctagagtcagag
gccgcaatcccccggtctcttcctacaccttccatgcaccttccacttccccccaatcat
gcccttgaagcacgatcccttctgccatcccgtgaatctttgccggatatgcttgtccgt
gggcggttgcctacggaagaggacatcccacgcacaccggggagagacctcatggacaga
ccccggggtttgggcaagtctcagagcactgatacggttcctgtcacaccaggtagtgac
gctccactaacaggtaacagcttgagctcgccgcatattcccggcagccctttctcttac
cctgctcaatctcctgtcctcagtgctggtatccctcggactccaggtagagaccttact
ttcaccccagctttccctgactctgctgctttatctgcaggccttcccattcacaggaag
gcctcatctgaaagcttggaggagaagtctctatttaaagagcctcaactcagtgcctct
ccccaggccagcctacctaacaataaagcttcttccccattccctggtcctccccttcct
gctgcttcacttcaggagcctccccaaggctcctctcccacttctgcagagacttcctct
cctgctgctccaaaagatctacctgttccaatgatagatgttcctgtgcccttagattct
actccaagcaagagaaaaccaggacgtcccaagtctaaaaagctgtctgttgaagcctct
caagactatgaagagcctccagctccaatggtggcctccttacctccagacctaccagaa
aatgacatgtacccagactgcccttcagagaccttcaaaggtgaagatggtgattccaca
gccttggaggaagaggaaaaccaagacctgacagtcatacctcaggtggaagacaggatg
ttttatgacgaggaacctgttcagaagacacggcgacagagacggggctggcaggagttg
ttgttgtccatgcattccactgtgacatcaccgcgccgccccagcttcttaccccgctca
gaatttgaggagatgaccatcttgtatgacatctggaatgatggcattgacgaggaggac
atgcaataccttaagaccacttacgacaagatgcttgagcaggacaatggcaacgactgg
ctcaacgacaccctctgggtccatcatcctcctaccaacatgggcagtgcaactgtggtg
aagaagaagcgaaaagaggatggtatacgggaccatgtcaccggctgtgcccgcagcgag
ggctactacaaaatcgacaagaaagacaaaatgaagtacctgaacagctcacgcctgcag
tccgaagagtctgatgtggacactcaggggaagagtattccagcacagcccctaacgtcc
actagggcaggttcagaacggcggtctgaacagcgccgtctgctgtcgtccttcagctgt
gacagtgacctcctcaaatttaaccagcttaagttccgtaaaaagaagatccggttctgt
agaagtcacattcacgactggggattgttcgccatggaacctattgctgcggatgagatg
gttatcgaatatgttggccagaatatccgacaggttatagcagacatgcgagagaagcgc
tatgaggaagagggcatcggcagtagctacatgttccgtgtggatcacgataccattata
gacgcaaccaaatgtggcaacttcgcccgcttcatcaatcatagttgcaatccaaactgt
tatgccaaggtcatcactgtggaatcacagaaaaagatcgtcatctactcccggcagcca
ataaatgttaacgaggagatcacctacgactacaagttccccattgaggacgagaagatc
ccgtgcctctgtggcgcagagaactgcagaggaaccttaaactaa
DBGET
integrated database retrieval system
