Pimephales promelas (fathead minnow): 120480842
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Entry
120480842 CDS
T08155
Symbol
cacna1ab
Name
(RefSeq) calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, b isoform X1
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04010
MAPK signaling pathway
pprm04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120480842 (cacna1ab)
04020 Calcium signaling pathway
120480842 (cacna1ab)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120480842 (cacna1ab)
Ion channels [BR:
pprm04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120480842 (cacna1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Chordopox_G3
Motif
Other DBs
NCBI-GeneID:
120480842
NCBI-ProteinID:
XP_039530203
LinkDB
All DBs
Position
Unknown
AA seq
2499 aa
AA seq
DB search
MLSPMYADSSVIMERAPSLRKGGRVQPQGHKLRCHPPTSGSSVCANPTYYHTVYDMSDEA
CQVDSFDYSKTNGETVVMDGTLYSLMPSDSLVPPVRRRGALVDHRDVIKAHQSHKLQSTP
QARRKQWEMARFGDEVPARYGGGGSGQGGPGRGGSRQGGPPGAQRMYKQSMAQRARTMAL
YNPIPVRQNCLTVNRSLFLFSEDNIIRKYAKKITEWPPFEWMILTTIIANCIVLALEQHL
PDGDKTPLSERLDDTEPYFIAIFCFESGIKILALGFAFHKGSYLRNGWNVMDFVVVLTGI
LSSVGSELDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGVLLFVAILMFA
IIGLEFYMGKFHETCYDNVTHEIFDEQPCGARSCPEWSSCMGYWIGPNYGITQFDNVLFA
VLTVFQCITMEGWTDMLYYSNDALGSAWNWMYYVPLIIIGSFFMLNLVLGVLSGEFAKER
ERVENRSEFLKLKRQQQIERELNGYLEWICKAEEVILAEDDIGPGDRSRRRPTLKKNKAD
LLNPEEGEDHMGDAVGSPFARASIKSGKGDGTPFNKKERRLRFFIRKIVKTQTFYWTVLS
LVGLNTLCVAVVHYDQPELLSDFLYYAEFIFLGLFMSEMLIKMYGLGTRPYFHSSFNCFD
CIVIVGSIFEVFWAMVKPGASFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSII
SLLFLLFLFIVVFALLGMQLFGGQFNFEQGTPPTNFDTFPAAIMTVFQILTGEDWNVVMY
DGIKSQGGVDKGMIFSVFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQQEEEATS
QKLALQKAKEVAEVSPLSAANLSISAVTVKSERIDATDSLLDCKEQQKNSKGSKSVWEQR
TSEIRRQNLMTSREALYNELDAEDHWKMNYRNRPDMKTHLDRPLVVNPQENRNNNTNKPR
PGEPNPQELNQQRGEEYLQHQPRYHHHHSHHHHHHHHTHSSRQSLHHPEQGEAGCEYVQR
AGEDVEGAGEHRRPRHHQHRRRDEDGAERGRRHREHHSRGETGREGEEGQEKRQRRHRHG
NHGDGDGRRDRSRQHQARKEASLSLARPIQPGLSHTESQYSEDMDNLRNSSKMAIHDPDP
DLYDPYCDPEQANNLLNLRGPDLHDSSLILTDSSKTPSKLDHTAIDMPPIYPSLNAKLQV
NKNANTEPAKEGEKKEEEEDDGGDEDGPKPIPPFSSCFILSTTNPFRRCCHYILTLRYFE
MCILSVIAMSSIALAAEDPVSPESPRNNVLRYFDYVFTGVFTFEMLIKMVVLGLVLHEGS
YFRDLWNFLDFVVVSGALVAFAFTGSSKGKDISVIKSLRVLRVLRPLKTIKRLPKLKAVF
DCVVNSLKNVLNILIVYMLFMFIFAVVAVQLFKGRFFYCTDESKEFARDCRGEYLVYERN
NEVKSQKREWKKYDFHYDNVLWALLTLFTVSTGEGWPQVLKHSVDSTYENQGPSPGYRME
MSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEDYSLEKNERACIDFAINAKPLTR
HMPQNKQSFQYRMWQFVVSPPFEYSIMALIALNTVVLMMKYDRAPESYDAVLKNLNIVFT
TLFFMECILKIIAFGIKNYFRDAWNIFDFVSVIGSITDILVTEFGDNFINLSFLRLFRAA
RLIKLLRQGETIRILLWTFVQSFKALPYVCLLIAILFFIYAIIGMQLFGNLDITEEEDSA
INEHNNFRTFIMALMLLFRSATGEAWHEIMLACLGGKKCDEKSGNEGPECGSNFAYAYFV
SFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRIWAEYDPAACGRIHYKDM
YSLLRVIDPPLGLGKKCPHRVACKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKG
GADKHQMDAELRKEMMAIWPNLSQKNLDLLVTPHKSATDLTVGKIYAAMMIMEYYRQSKA
KKLQVLREEQNRTPLMFQRLEPSPNQEGGPGVNGLPELPQEPVNSLPPEGGMSESQSWVT
SRAQEMFQKSVPENWNPDRPTYPDDHHNSRHNPQTVEMREIGPVGDGYSDTEPYHPMEGH
GRTISMPRLSADNQSVHSAARRRHRPRGSNLSTITDTSPMRRSTSSLVHGRSGRGVRLDD
YSLERVVSEEIHRHGPRRRERDRDRERDRSHRTSERSLARYTDADTGLGTDLSTTTQSVD
LPPKERERERGRAKDRRHHHHHHHHHHSSVDKERYSHERDYHRHPQDRSDRQWSRSPSEG
RGHRQGSSSVSGSPVPSTSGTSTPRRGRRQLPQTPSTPRPHVTYSPAVRKPPYGSPGQGR
LRSPSPRHFSPPDIEPPYQRPPSRHASPHHDSSRHVSPRSPRHASPRSPRRGRWGPPPDS
LESDGPFYDRDYEYERHHEPPAYEQSLSQGNPHPHPRSPRTARHGPPLHPRRVPNGYRSS
SPSPHRRNPHPGPHRPANGRGPRKGLHEQYSETDEDDWC
NT seq
7500 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctcccatgtatgcagacagctcagtcatcatggagagagcgccgtccttgcgg
aagggtgggagagtgcagccacagggccacaaactgcgctgtcatcctcctaccagcggg
agcagcgtttgtgccaaccccacctactatcatactgtgtatgacatgagtgatgaagca
tgccaggttgactcctttgactacagcaaaaccaatggggaaaccgtggtgatggatggg
acactttactctttgatgcccagtgattctctggttcctcctgtcagaaggagaggggcc
ctagtggaccaccgtgatgtcatcaaagcccaccagtcccataaattgcagagcactcca
caagccagaagaaaacaatgggaaatggctcggttcggagacgaagtgccggccaggtac
ggcggcgggggctccggtcaggggggacccggccgcggcggcagcaggcagggcggcccg
ccaggggcccagaggatgtacaagcaatcgatggcccagagagcccggaccatggccctc
tacaacccgatcccggtccgacagaactgcctgacggtcaaccgctctctgtttctcttc
agtgaagacaacataattcgaaaatacgccaaaaagatcaccgaatggcctccgtttgag
tggatgattttaaccaccatcattgccaactgcatcgtattggctcttgaacaacacttg
ccagatggagacaaaactccactgtcagaacgactggatgacacagagccctatttcatt
gctattttctgttttgaatcgggcattaagattcttgcgctgggatttgccttccacaag
ggctcctacctgagaaatggctggaacgtaatggactttgtagtggtgctcacgggtatc
ctgtcctccgtggggtcagaattagacctacggacattgcgagcagtcagagtgttgcgg
ccactaaaattggtgtcaggaattccaagcctgcaggtggtgctgaagtccatcatgaag
gccatgattccacttttgcaaattggcgtgctcttatttgtggccatccttatgtttgcc
attattggcctggagttctacatgggcaaattccacgaaacatgctacgacaatgtcaca
catgagatttttgacgaacagccctgtggtgctcgaagctgtccggaatggtcgagttgt
atgggatactggatcgggccaaactatggcatcacacagttcgacaatgtcctttttgcc
gtgctcactgttttccagtgcattaccatggagggttggacggacatgctttattacagc
aatgatgccttagggagtgcatggaactggatgtactatgttcccctcatcatcatagga
tccttctttatgcttaatctggtgttgggtgtcctttcaggcgagtttgccaaagaaaga
gagcgtgtggagaacaggagcgagttcctcaagctcaaacgtcagcagcagatagagaga
gaactcaatggatatctggaatggatctgcaaagcagaggaggtcatactcgctgaggat
gacattggccccggtgacagatctcgtcgcaggcccacattaaagaaaaacaaagctgac
cttttaaatccagaagaaggagaggaccacatgggagatgcagttgggtcgccctttgct
cgtgcgagcataaagagcgggaagggtgacggaactccgtttaacaagaaagagcgccgt
cttcgcttctttattcgaaagatcgtaaagactcagacgttctactggaccgtcctcagc
ctggtgggactcaacacactgtgcgtggccgtcgtacactacgatcagcccgagctactg
tcagacttcctctattatgctgagttcattttcctaggcctctttatgtcagagatgctg
attaagatgtacggactggggacgcgcccttatttccactcctcattcaactgtttcgac
tgtatcgtcatcgttggcagcatatttgaggtgttctgggccatggtcaagccaggggcg
tcctttggaatcagcgtgttacgagctctccgactacttaggatcttcaaagtcaccaaa
tactgggcgtctttgcgtaatctggtagtgtctcttctgaactccatgaagtccattatc
agtttacttttccttctcttcctcttcatcgtggtctttgctcttctcggcatgcagctg
ttcggtggacagtttaactttgagcaaggcactcctcccacaaactttgatacttttcct
gctgccattatgacagtgtttcagattctaacaggagaggattggaacgtggtgatgtat
gatggcattaagtctcagggaggggtggacaaaggaatgatcttctccgtattcttcatt
gtcctcacactctttggcaactacacactactgaatgtattcttggctatcgctgtggac
aacctggccaatgctcaggaactaactaaggatgaacaacaagaagaggaggccacatca
caaaagcttgctcttcagaaagcaaaagaagtggcagaagtgagcccactgtctgctgcc
aacctctctatttctgcagttacagtaaaatctgagcgtatcgatgccacagacagttta
ctggactgtaaagagcagcagaagaactcgaaaggttctaagtcagtgtgggagcagcgc
acaagcgagattcgcagacagaacctgatgaccagcagagaggcactttacaatgaactt
gacgcagaagatcactggaagatgaactaccgcaaccgtcctgacatgaagacccacttg
gaccgcccactagttgttaatcctcaggagaaccgcaacaacaataccaacaagccccga
ccgggtgaaccaaacccccaggagctgaaccagcagaggggtgaagaatacttgcagcac
cagccccgataccaccatcatcacagtcatcatcatcaccaccaccaccacacccactcc
agccgccagtccctacaccacccagagcagggggaggcggggtgcgaatatgtccagaga
gcaggcgaggacgtggagggcgcaggcgagcacaggcggcccaggcaccaccagcaccga
aggagggatgaagatggagcagaaagagggagaagacacagagaacaccacagcagagga
gagacaggaagagaaggggaggagggccaagagaagaggcagaggaggcatcgccatgga
aaccatggggatggagatggaaggagggataggagtcgacagcatcaagctagaaaagag
gctagtttatcgttggcccgtccaattcagccaggtctatctcacacggagagccagtac
agtgaggatatggacaacttgcgaaacagcagcaagatggccatccatgaccctgatcct
gatctttatgacccctactgtgacccagagcaagccaataatctgctgaacctgcgtgga
ccagatctccatgacagcagtctcattctgacagactcctccaaaacccccagcaaactc
gaccacactgccatagatatgcccccgatttacccctcactcaacgccaagttacaagtg
aacaaaaatgccaacacggagccggctaaagaaggagagaagaaagaagaggaagaagac
gatggtggcgacgaagacggacccaaacccattcccccattcagttcttgtttcattcta
tccacaaccaacccgttccggagatgctgtcattacatactgacgctacgttatttcgag
atgtgtattctgtcagtcatcgctatgagcagtattgcattagcggctgaagatcctgta
tcgccagaatcacctcgaaacaacgttttgcgttactttgactatgtattcacgggtgtg
ttcacctttgagatgctcatcaagatggttgtgttaggcttggttttgcatgagggctca
tattttcgtgacctctggaactttctggactttgtagtggttagtggtgccctggtagcc
tttgccttcacggggagcagtaaggggaaagacatcagtgtcatcaagtctctgagggtc
ctaagggtgctacgtccactcaagaccatcaaacgtcttcctaaactaaaagcggtgttt
gactgtgtagtaaactctctgaagaacgtgttgaacatcctcattgtctacatgctgttc
atgttcatcttcgctgtggtggccgtgcagctctttaagggacgattcttctactgtacc
gacgagtccaaagagttcgcccgtgactgcaggggcgaatatttggtgtatgagcgtaat
aatgaggtcaaatcccagaagcgggagtggaagaagtacgattttcactacgacaacgtg
ctttgggccctgcttactctctttaccgtgtccactggagagggatggccgcaggtgttg
aagcactctgtggactccacttatgagaaccagggcccgagcccggggtaccggatggaa
atgtccatcttttacgtggtgtacttcgttgtcttccccttcttcttcgtaaacatcttt
gtagctctcatcatcatcactttccaggagcaaggagacaagatgatggaggactacagc
ctcgaaaagaatgagagagcctgtattgattttgctataaatgccaaacctctaacgcgc
cacatgcctcagaacaagcaaagctttcagtaccgaatgtggcagtttgtggtgtcgcct
ccgtttgagtacagtatcatggctcttattgcgctcaacacagtcgtccttatgatgaag
tacgacagggcccccgaatcgtatgatgcagtcctgaagaacctgaatattgtgttcacg
acactcttcttcatggagtgtattctgaaaatcattgcctttggtatcaaaaattatttc
cgagacgcttggaatatttttgattttgtgtccgttatcggcagcatcacagatatttta
gtgacagagtttggggataacttcataaacctgagttttctgagactcttccgagcagca
cgtctcattaagctcttgaggcagggcgagaccattcgcattctgctttggaccttcgtt
cagtcatttaaggctttgccatatgtgtgtctgctcattgcaattctgttcttcatctat
gccatcattggcatgcagttgtttgggaacttggatattacagaagaggaagacagtgcg
atcaatgaacacaacaacttcagaaccttcatcatggccctaatgctcctcttcaggagt
gccactggcgaggcatggcatgagatcatgctggcatgtcttggtggaaagaaatgtgat
gagaaatctggaaacgaagggccagagtgcggcagcaactttgcctatgcatactttgtt
tctttcatcttcctctgttctttcctgatgctgaatctcttcgttgctgtcatcatggat
aactttgagtacttgaccagggactcctccatcctgggtccacatcatttggatgagtat
gtcaggatatgggcagagtacgacccagctgcctgcgggcgcattcattataaggatatg
tacagtttattgcgggttatcgaccccccgctgggcttaggcaagaaatgtcctcatagg
gtggcctgcaagagactgctacgtatggaccttcctgttgctgatgataacacggtgcat
ttcaactctactctgatggctttgatacgcacagctctggacatcaaaatcgccaaggga
ggcgcagacaaacaccagatggacgcggagctccgtaaggaaatgatggcgatttggcca
aatctgtcccagaagaacctggatctgctggtaacgccacacaagtcagcgacagacctg
acagtgggcaagatctacgccgccatgatgataatggagtactaccggcagagcaaggcc
aaaaagctgcaggtgcttcgtgaggagcagaaccgaacgccattaatgtttcagcgcttg
gagccatccccgaaccaggaagggggaccgggggtgaacggtctcccggagttgccgcag
gaacctgtcaacagcctgcctccagagggtggaatgagtgagagccaatcttgggtgacg
tcccgtgcccaggaaatgttccagaagtctgttccggaaaactggaaccctgacagacca
acgtatcctgatgaccatcacaacagccgccataatccacagacggtagaaatgagagag
attggccctgttggggacggttactcggacactgagccctatcacccaatggaagggcat
gggcggaccatctccatgccacgcctctcagcagacaaccaaagtgtgcattctgctgcg
cgacggagacacaggcctcgaggaagtaacctcagtaccatcaccgacacaagtccaatg
cgccgttctacatcctcactggtccacggacgttctggtcgaggcgtacgattggacgat
tattctttggagagggtggtgtcagaagagattcaccgacacggtccgcgaaggagagag
cgtgatcgagaccgggagagagaccgcagtcaccgcacctctgagagatccctcgctcgc
tatacagacgcagacacaggactgggcacagatcttagcaccactacacagtcagttgac
cttccacctaaagagagagagcgagaacggggtcgagcaaaagaccgtcgccaccaccat
catcatcatcaccaccaccacagctcggtggataaagagcgttacagtcatgagcgtgac
taccaccgtcatcctcaagacagatctgatcgccaatggtcccgctcaccgagtgagggg
agagggcacagacagggcagtagttctgtgagcggaagccccgttccctcgacgtcgggg
accagcaccccccggcgtggccgtcggcagttgccccagaccccatccacacctcgtcct
catgtcacctactccccagccgtccgcaagcctccatacggctccccgggccagggtcga
ctccgctccccttccccgcgacacttctctccaccagatatcgaaccgccctaccagcgc
ccaccctcccgccatgcctcgcctcatcacgactcgtcccggcacgtctccccgcgctcc
cccaggcatgcgtcacccaggtccccacgtcgcggccgctggggcccgccgccggacagc
ctggagagcgatggaccattctatgatcgggactatgagtacgagcggcaccacgaacca
cctgcctacgagcagagcctatcgcagggcaaccctcacccgcacccccggtccccaagg
actgctcgacacgggcctcccttacacccgcgccgtgtgccgaacggctaccgttcctcc
tcgccctccccgcaccggcgcaacccccacccaggcccacaccggccggcaaatggccgt
gggccccggaaggggttgcacgaacagtatagcgagacggacgaggatgattggtgttag
DBGET
integrated database retrieval system
