Pimephales promelas (fathead minnow): 120482788
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Entry
120482788 CDS
T08155
Symbol
ubc
Name
(RefSeq) polyubiquitin-C
KO
K08770
ubiquitin C
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03320
PPAR signaling pathway
pprm04120
Ubiquitin mediated proteolysis
pprm04137
Mitophagy - animal
pprm04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120482788 (ubc)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120482788 (ubc)
04137 Mitophagy - animal
120482788 (ubc)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
120482788 (ubc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120482788 (ubc)
Ubiquitin system [BR:
pprm04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
120482788 (ubc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
120482788
NCBI-ProteinID:
XP_039533346
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGN
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttttgtgaagacgctgactggcaagaccatcactcttgaggttgagcccagc
gacaccattgagaatgtcaaggccaagatccaggacaaggaaggcattcctcctgaccag
cagcgtctgatcttcgctggtaaacagttggaagatggacgcacgctgtccgactacaac
atccagaaggagtccaccctccatctggtgctccgcctcagaggtggaatgcagatcttc
gtaaagaccttgactggcaagaccatcactcttgaggtggaaccaagcgataccattgag
aatgtcaaggccaagatccaggacaaggaaggcattcctcctgaccagcagcgtctgatc
ttcgctggcaaacagttggaagatggtcgcacactgtccgactacaacatccagaaggag
tccaccctccatctggtgctccgcctcaggggtggtatgcagatcttcgtaaagaccttg
actggcaagaccatcactcttgaggttgagcccagcgacaccattgagaatgtcaaggcc
aagatccaggacaaggaaggcattcctcctgaccagcagcgtctgatcttcgctggcaaa
cagttggaagatggtcgcacgctgtccgactacaacatccagaaggagtccaccctccat
ctggtgctccgcctcaggggtggtatgcagatcttcgtaaagaccttgactggcaagacc
atcactcttgaggttgagcccagcgacaccattgagaatgtcaaggccaagatccaggac
aaagaaggcattcctcctgaccagcagcgtctgatcttcgctggcaaacagttggaagat
ggacgcactctgtccgactacaacatccagaaggagtccaccctccatctggtgctccgc
ctcaggggtggtatgcagatcttcgtcaagaccctgactggcaagaccatcactcttgag
gttgagcccagcgacaccattgagaacgtcaaggccaagatccaggacaaagaaggcatt
cctcctgaccagcagcgtctgatcttcgctggtaaacagttggaagatggacgcacgctg
tccgactacaacatccagaaggagtccaccctccatctggtgctccgcctcaggggtggt
atgcagatcttcgtcaagaccctgactggcaagaccatcactcttgaggtggaaccaagc
gacaccattgagaacgtcaaggccaagatccaggacaaagaaggcattcctcctgaccag
cagcgtctgatcttcgctggcaaacagttggaagatggtcgcacactgtccgactacaac
atccagaaggagtccaccctccatctggtgctgcgcctcaggggtggtatgcagatcttc
gtaaagaccttgactggcaagaccatcactcttgaggttgagcccagcgacaccattgag
aacgtcaaggccaagatccaggacaaagaaggcattccacctgaccagcagcgtctgatc
ttcgctggtaagcagttggaagatggacgcacgctgtccgactacaacatccagaaggag
tccaccctccatctggtgctccgcctcaggggtggtatgcagatcttcgtaaagaccctg
actggcaagaccatcactcttgaggtggaaccaagcgacaccattgagaacgtcaaggcc
aagatccaggacaaagaaggcattcctcctgaccagcagcgtctgatcttcgctggtaaa
cagttggaagatggacgcacgctgtccgactacaacatccagaaggagtccaccctccat
ctggtgctccgcctcaggggtggtatgcagatcttcgtcaagaccctgactggcaagacc
atcactcttgaggttgagcccagcgacaccattgagaacgtcaaggccaagatccaggac
aaggaaggcattcctcctgaccagcagcgtctgatcttcgctggcaaacagttggaagat
ggacgcacgctgtccgactacaacatccagaaagagtccaccctccatcttgttctgcgt
cttcgtgggggcaattaa
DBGET
integrated database retrieval system
