Pimephales promelas (fathead minnow): 120495253
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Entry
120495253 CDS
T08155
Symbol
capn1b
Name
(RefSeq) calpain-1 catalytic subunit b isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04141
Protein processing in endoplasmic reticulum
pprm04210
Apoptosis
pprm04217
Necroptosis
pprm04218
Cellular senescence
pprm04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120495253 (capn1b)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120495253 (capn1b)
04217 Necroptosis
120495253 (capn1b)
04218 Cellular senescence
120495253 (capn1b)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120495253 (capn1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprm01002
]
120495253 (capn1b)
Enzymes [BR:
pprm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
120495253 (capn1b)
Peptidases and inhibitors [BR:
pprm01002
]
Cysteine peptidases
Family C2: calpain family
120495253 (capn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
120495253
NCBI-ProteinID:
XP_039550651
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
METGLEQYGMGSTLCLNDYLILVHYSMFSIGGMSSRIYKERLQAEGMGSNDNAAKFLNQD
YEELKRECVESGRLFEDSCFPAVPQSLGFKELAPNSSKTRGVKWIRPTELSNNPQFIVGG
ATRTDICQGALGDCWLLAAIGSLTLNDKLLHRVVPHGQSFTDEYAGIFHFQFWQFGEWVD
VVIDDRLPVKDKELMFVHSAEGNEFWSALLEKAYAKLNGSYEALSGGSTTEGFEDFTGGV
AEMYELCKAPKDLHRIISKALERGSLLGCSIDITSAFDMEAVTFKKLVKGHAYSVTALRE
VNFRGRKERLIRIRNPWGQVEWTGAWSDNSSEWNGIDPAEREEMNNHMEDGEFWMSFEEF
KRQFSRLEICNLTPDALSEDSQHFWNTIKFNGTWRRGSTAGGCRNHPNTFWINPQYKITL
QEEDDDPEDDEVACTFMVALMQKDRRRYRKQGQDMHTIGFAIYEVPEEFRGSQSVHLKKE
FFLRQSSCARSDSFINLREVSTRLKLPPGEYLIVPSTFEPGKEADFVLRVFTEKQSETHE
MDDEISFNLEDEEEVSEENIDISFKKMFSQLSGEDMEISVQELRTILNRVVGKHRDLKTD
GFSMESCRCMVSLMDKDGSARLGIVEFQILWNKIRKWLGIFRQFDLDKSGTMSSYEMRLA
VESAGFKLNNKLHQILVARYSEGDTIDFDNFVCCLVKLDTMFKSFRELDREGKGIAELNI
SEWLYMTMCG
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggagacgggtttggaacaatatgggatgggatctactttatgtttaaatgactacctt
attttggtgcactacagtatgttttcaattggaggaatgtcgtcgcgtatctacaaggag
cgcttgcaggctgaagggatgggaagcaatgacaatgcggccaagttcctgaaccaggac
tacgaggagctgaagagagagtgtgtggagagcggcaggctgtttgaggactcctgcttt
cccgccgtgccccagtcactgggcttcaaggagcttgcgccaaactcctccaaaacacgc
ggtgtgaagtggataagacccactgagctgtcgaacaatcctcagtttatagttggtgga
gccactcggacagatatttgccagggggctctaggtgactgttggcttttggctgccatt
ggctccctgactttaaacgacaagctgcttcacagagttgtacctcatggccaaagcttt
acagacgagtatgccggcatcttccatttccagttttggcagtttggcgagtgggtggac
gttgtgattgatgaccgattgcctgtaaaggataaagagctaatgtttgttcactcagca
gagggaaatgagttctggagtgcccttttggagaaggcctatgccaagctgaacggctca
tatgaagctctgtcgggtggttccaccaccgaaggctttgaggacttcacaggtggagtg
gccgagatgtacgagctgtgtaaagctcctaaagacctgcaccgcatcatttccaaagcc
ttggagagaggctcactgctgggctgttccattgatatcaccagtgcctttgacatggag
gccgtgacttttaagaagctggtgaaggggcatgcgtactccgtcacagctctcagagag
gtgaatttccgtggcagaaaagagaggttgatccgcatccgaaacccttgggggcaagtt
gaatggacaggagcttggagtgacaattcttctgagtggaatggaattgatccagcagaa
agagaggaaatgaacaaccacatggaggatggcgagttttggatgtcatttgaggagttc
aaacgtcagttttctcgtctggagatctgtaacctcacaccagatgctctgagtgaagat
tctcaacatttctggaacacgattaagtttaatgggacctggaggcgaggaagtacagca
gggggctgcaggaaccaccccaatacattctggataaaccctcaatataagatcacgcta
caggaggaagatgatgatcctgaggatgatgaggtggcctgcacattcatggtggccttg
atgcaaaaggacagacggcgttatcgcaagcaaggacaggatatgcacaccatcggcttt
gccatatatgaggtcccagaagagtttcgtggctcccagagtgttcacctcaagaaggaa
tttttcttgcgtcagtcgtcctgtgcgcggtcagacagcttcattaatctgcgagaggtc
agtacgcgactgaaactgccaccgggcgagtatctcattgtcccttccacttttgagcct
ggaaaagaggctgacttcgtcctgcgagtcttcaccgagaaacagtcagaaactcatgaa
atggatgatgagatttcatttaacctggaagatgaagaagaggtttcagaggagaatatt
gatatctctttcaaaaaaatgttttctcagctgtcaggagaggacatggagatttcagtt
caagagctcaggaccattctgaaccgagtggtgggcaaacacagggacttaaagacagac
gggttcagtatggagtcgtgtagatgcatggtcagcctgatggataaagatggaagtgca
cggctgggaattgtggagttccagattctgtggaataaaatcaggaagtggctgggcatt
ttcagacagtttgatctggataaatctggcacaatgagctcctatgaaatgcgcctggct
gtggagtcagctggttttaaactgaataacaagcttcatcagatactggtggcacgatat
tccgaaggagatacaattgacttcgacaactttgtctgttgcctggttaaactggacacc
atgttcaagtctttcagagagctggatagagagggtaaaggcatcgcagaactcaatata
agcgagtggctgtacatgaccatgtgtggttga
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integrated database retrieval system
