Pimephales promelas (fathead minnow): 120495376
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Entry
120495376 CDS
T08155
Symbol
si:ch211-79m20.1
Name
(RefSeq) adenylate cyclase, terminal-differentiation specific isoform X1
KO
K17386
platelet-derived growth factor subunit B
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04010
MAPK signaling pathway
pprm04020
Calcium signaling pathway
pprm04510
Focal adhesion
pprm04518
Integrin signaling
pprm04540
Gap junction
pprm04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120495376 (si:ch211-79m20.1)
04020 Calcium signaling pathway
120495376 (si:ch211-79m20.1)
09133 Signaling molecules and interaction
04518 Integrin signaling
120495376 (si:ch211-79m20.1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120495376 (si:ch211-79m20.1)
04540 Gap junction
120495376 (si:ch211-79m20.1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120495376 (si:ch211-79m20.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pprm04052
]
120495376 (si:ch211-79m20.1)
00536 Glycosaminoglycan binding proteins [BR:
pprm00536
]
120495376 (si:ch211-79m20.1)
Cytokines and neuropeptides [BR:
pprm04052
]
Cytokines
Growth factors (RTK binding)
120495376 (si:ch211-79m20.1)
Glycosaminoglycan binding proteins [BR:
pprm00536
]
Heparan sulfate / Heparin
Growth factors/receptors
120495376 (si:ch211-79m20.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
120495376
NCBI-ProteinID:
XP_039550840
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MMSSRLLLLVLAALAACLRSGRAQGDPLPPSLVDLVMNSPISSVDDLKRLLDVESVEEDD
EIPESEMHSNGTHKRLPRSLNVQVAQQAMCKVRTEVMEVTRAMLDRRNANFLLWPPCVEV
QRCSGCCNTRTVQCMPVTIETRQLQMTKIQYINRQPVYEKVVIPVEDHLTCSCQSRVLAL
SPRLLTTPLPPPRLHPKVTLPKTQSKEELHRHDELKHNQRLHLEDKESQELQWQSKNTVT
HTQGYRQSPYRHTLTHTAVHVSGGDVPTRQTTLGDPHMMSDATQTEEVKSEHSGDSMAKK
TQQHYDKHLQEDQQAEPRQPQDKTTPQQPKYNASHNPVQSGHSMPHSSQLDTFSTYSHVE
VIGQSSGLSEVLSHHSDQSEVRKHHHHQSEANNPNIQEREQQPETQHHLRHQNHRHHQLH
QHTTQAVSHQQTSTQKTVPSAPPTTPSAPQTPPPLQPPRKRRRKHRKRMSKASMRAMIMV
MS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctcgcggcttctgctgctggtgctcgcggcgctcgcggcgtgcctgcggtct
ggtcgcgcgcagggtgaccctcttcctccatctctggtggatttagtgatgaacagcccg
atctcatccgtagatgatctgaagagacttctagacgtagaatccgtagaagaggacgat
gagatacccgagagtgagatgcactctaacggaacacacaaacgtcttcccagaagcctt
aatgttcaggtggcccagcaggccatgtgcaaggtgagaacagaagttatggaagtgacc
cgcgcgatgctggaccgacggaacgccaacttcctgttatggcctccgtgtgtggaagtg
cagcgctgttcaggctgctgtaacacacgcactgtacaatgcatgccagtcaccattgaa
acacgacaattacagatgacgaaaatccagtatatcaaccgacaaccagtctatgagaag
gttgtcatacccgtggaggaccatttgacttgtagctgtcaatcacgcgttttggcgctc
agcccacggctcctgaccacacctcttcctccgcccagactccaccctaaagtaacgcta
ccaaagacccaatcaaaagaggaactacatcgccatgacgaacttaaacataatcaaagg
ctccatttggaggataaagagagtcaggaactacaatggcagtccaaaaacaccgtcaca
cacacacagggctaccgacaaagcccataccgtcatacactcacacacacagcagttcat
gtgagcggaggagatgttcccaccagacaaaccacattaggagatccacacatgatgagt
gacgctacacaaactgaggaggtgaaatctgaacacagtggcgacagcatggcgaaaaag
acgcaacagcattacgacaaacatctgcaagaggatcaacaggcagaaccacggcaacca
caggataaaacgacaccacagcaaccaaaatacaatgcttcccacaatcccgtccaatca
gggcacagcatgccacacagtagccaattagacacttttagcacttacagccacgttgag
gtgatcggccaatccagtggcttatctgaagtgctaagtcatcactctgaccaatcagaa
gttagaaaacatcaccaccaccaatcagaagcaaataatccaaatatccaggaaagggag
cagcagccagaaacacaacatcatcttcgtcaccaaaaccaccgacaccatcagcttcac
caacatacaacgcaagcagtcagccatcaacagactagcacacaaaaaacagtgccgagc
gctcctcccaccaccccctcagccccacagactccgccccctctccagcccccgcggaag
cgacggcggaaacatcggaagaggatgagcaaggcctccatgagagcgatgataatggtc
atgtcctga
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