Paenibacillus protaetiae: ET464_17085
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Entry
ET464_17085 CDS
T06829
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pprt
Paenibacillus protaetiae
Pathway
pprt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pprt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ET464_17085 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pprt03021
]
ET464_17085 (rpoB)
03400 DNA repair and recombination proteins [BR:
pprt03400
]
ET464_17085 (rpoB)
Enzymes [BR:
pprt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ET464_17085 (rpoB)
Transcription machinery [BR:
pprt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ET464_17085 (rpoB)
DNA repair and recombination proteins [BR:
pprt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ET464_17085 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
QAY67850
UniProt:
A0A4P6EWT1
LinkDB
All DBs
Position
3707576..3711139
Genome browser
AA seq
1187 aa
AA seq
DB search
MRGEVKLAGQLVQYGRRTRRSYARINEVLEVPNLIEIQQKSYEKFLESDLLELFQDISPI
QDFTGNLSLEFIDYSLGEPKYSVDDSKERDVTYAAPLRVKVRLFNKETGEVKEQEVFMGD
FPLMTETGTFIINGAERVIVSQLVRSPSVYFSTKVDKNGKKTYTATVIPNRGAWLELETD
AKDIIYVRIDRTRKIPVTVLLRALGFGTDAEILELLGNDEYIRNTLDKDNTDSTEKALIE
IYERLRPGEPPTLDNARSLLVARFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLF
DPDTGEIIAEAGQVIDRRLLDEILDRLETNVGFKTYHVAGGVLESDSIPLQAVNVFSPLD
ETKVIKVISNGIIDKAVKHITPADIIASINYFINLLHGVGNTDDIDHLGNRRLRSVGELL
QNQFRIGLSRMERVVRERMSIQDANAITPQALINIRPVIASIKEFFGSSQLSQFMDQTNP
LAELTHKRRLSALGPGGLTRERAGMEVRDVHPSHYGRMCPIETPEGPNIGLINSLSTFAR
INEYGFIEAPYRWIDPKTGRVTDQVTYMTADEEDNYVVGQANALLNEDGSFVEETNIVRY
NKQADNILTMPSSRIDYMDVSPKQVVSVATALIPFLENDDSNRALMGSNMQRQAVPLLIP
KAPFVGTGMEHKAAKDSGVCIVSKYDGIIERVTANEIWLRRVETIDGREVHGDLIKHKVH
KFMRSNQGTCINQRPIVRKGEVIKKGDILADGPSTEQGELALGRNVVVAFMTWEGYNYED
AILLSEKLVKEDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEEALKNLDERGIIRVG
AEIGAGDILVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGTDGIVVDVKVF
TRENGDELPPGVNQLVRVYIAQKRKISQGDKMAGRHGNKGVIARIMPEEDMPFLPDGTPV
EVVLNPLGVPSRMNIGQAFEVHLGMACKLLGIHAATPVFDGARENDVFDTLVEAGMQRNG
KTVLYDGRTGETFEREVTVGVMYMIKLAHMVDDKIHARSTGPYSLVTQQPLGGKAQFGGQ
RFGEMEVWALEAYGAAHTLQEILTVKSDDVVGRVKTYESIVKGENVPEPGVPESFKVLIK
ELQSLGMDVKILSENEEEIEMKESDDEDDAAGDKLNLNLEGAEVGAE
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgaggggtgaggtaaagttggcaggacaacttgttcagtatggtcggcgcacgcgtaga
agctatgcccgaatcaacgaggtgctggaagtcccaaacctaattgagatccaacaaaaa
tcgtacgagaagtttctggaaagcgatctgctagaactgttccaggatatctcgccgatt
caggactttacggggaatctatcacttgagtttatcgattatagcttgggggaacctaag
tattcggttgacgattcgaaagagcgcgatgtgacgtatgctgctccattacgcgttaag
gtgcggctgttcaataaggaaaccggcgaagtgaaggaacaagaagtgttcatgggtgac
ttcccgctgatgaccgagaccggcacgtttattattaacggggcggaacgggttatcgtc
agtcaattggttcgatccccaagtgtatatttcagcacgaaggttgataagaacgggaag
aagacatacacggctactgtcattcctaaccgcggcgcatggctcgagcttgaaacggac
gccaaagatatcatttacgttcggatcgaccgcacgcgcaaaatcccggtaacggttctt
ttgcgtgcgcttggtttcggcaccgatgccgaaattttggagctgcttggcaatgacgag
tatatccgcaatacgctcgacaaggataacaccgactcgacggaaaaagcattgatcgaa
atttatgaacgtcttcgtccaggcgagccgccgacattggacaacgcaagaagcctgctc
gttgcgcgcttctttgatccaaaacggtatgaccttgcaaacgtaggccgttacaaaata
aacaaaaagcttcacatcaaaaatcgcttgttcaaccaacgtcttgctgagacgctgttt
gatccggacacaggcgaaattatcgctgaagctggtcaagtgattgaccgcagactgctt
gacgaaattttggaccgtcttgaaaccaacgtaggtttcaaaacctaccatgttgcaggc
ggcgttctggaatccgacagcattccgcttcaagccgttaacgtattctcgccgctggat
gagacgaaggtgatcaaagtcatctcgaacggtattatcgacaaagcggtgaagcatatt
acgccggccgatattatcgcatccatcaactatttcatcaacctgttgcatggcgtaggc
aacacggacgatattgaccatttgggcaaccgccgccttcgttccgttggcgaactgctg
caaaaccagttccgtatcggtttgtcccgtatggaacgcgttgtccgcgaaagaatgtcc
attcaggacgcgaatgcgattacgccgcaggctcttattaatatacgcccggtcattgcg
tccattaaggaattttttggctcttcgcagctgtcgcagtttatggaccagacgaacccg
cttgccgagcttacgcataaacgccgtttgtccgctcttggacctggcggtttgacgcgt
gaacgggctggcatggaagtccgcgacgtccatccgtcccactatggacggatgtgcccg
atcgagacgccggaaggtccgaacatcggtctgatcaactccttgtcgacgtttgcccgg
atcaatgagtatggctttattgaagcgccataccgttggatcgatccgaagacaggtcgg
gtaacggatcaagttacctatatgactgccgatgaagaagacaactacgttgtaggccaa
gcgaacgctttgctgaacgaagacggttcatttgtggaagagaccaacattgtccgttac
aataagcaagccgataacattttgacgatgccgtccagccggattgactatatggacgta
tcgccgaaacaggttgtttccgtggcgacggctcttattccgttccttgagaacgatgac
tcgaaccgcgccttgatgggatcgaacatgcaacgccaagctgtaccgcttcttattccg
aaagctccgttcgtcggaacgggcatggagcataaagcggcgaaagactcgggtgtatgt
attgtatccaagtacgacggtattattgaacgggttacggcaaatgaaatttggctgcgt
cgtgttgagacaatcgacggccgcgaagttcacggtgacctgattaaacataaagttcat
aaatttatgcgttccaaccaaggtacctgcatcaaccagcgcccaatcgtccgcaaaggc
gaagtaatcaaaaaaggcgacattctggctgacggcccttcgacggaacaaggcgaattg
gcgcttggccgcaacgtagtcgttgccttcatgacttgggaaggttacaactacgaggat
gccatcctgcttagcgaaaaacttgtgaaagaagacgtgtacacgtccattcacattgag
gaatatgaatccgaagcccgcgatacgaagctggggccggaagaaattacacgcgacatc
ccgaacgttggggaagaagcgctcaaaaacctcgacgaacgcggtattatccgtgtcggc
gccgaaattggcgcgggcgacattctggtcggcaaagtaacgcctaaaggcgtaacggag
cttacggcagaagaacgcttgctgcatgccatctttggcgaaaaggcacgcgaagttcgc
gatacgtcgctccgtgtaccgcatggtacggacggcatcgttgtagacgtgaaagtattt
acgcgcgagaacggcgacgagctgcctccgggcgttaatcagcttgtccgtgtttacatc
gctcagaagcgtaaaatttcgcaaggcgataaaatggcaggacgccacggtaacaaaggg
gttatcgcgcgcatcatgccggaagaagatatgccgttcctgccggacggcacgccggtt
gaggtcgttctgaacccgctgggcgtaccttcccggatgaacatcggtcaagcgtttgaa
gtccatcttggcatggcctgcaagctgctcggcattcatgcggcaacgccggtatttgac
ggcgcgcgtgaaaatgacgtatttgacacccttgtagaagccggcatgcagcgcaacggt
aaaaccgttctgtacgacggccgcacaggcgaaacgtttgaacgtgaagtaactgtaggc
gtcatgtacatgatcaaactggcgcacatggtcgatgataaaatccatgcccgctcgaca
ggcccttactcgcttgttacccagcagccgctgggtggtaaagcgcagttcggcggccag
cgtttcggggagatggaagtatgggcgcttgaagcttacggtgccgctcatacgctgcaa
gaaatcctcacggttaagtctgacgacgtggttggccgcgtgaagacgtacgaatcgatc
gtgaagggcgagaacgtaccggagccaggcgttccggaatcgtttaaggtattgatcaaa
gagcttcaaagccttggcatggacgtaaaaatcctgtccgagaatgaagaggaaatcgag
atgaaagaatcggacgatgaagatgatgcagcgggcgataaactgaatctcaaccttgaa
ggcgcagaagttggcgcggaataa
DBGET
integrated database retrieval system
