Paroceanicella profunda: FDP22_07140
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Entry
FDP22_07140 CDS
T06319
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
ppru
Paroceanicella profunda
Pathway
ppru03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
FDP22_07140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ppru03011
]
FDP22_07140
Ribosome [BR:
ppru03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
FDP22_07140
Bacteria
FDP22_07140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
PCB_OB
RRP4_S1
Motif
Other DBs
NCBI-ProteinID:
QDL91580
UniProt:
A0A5B8FWM8
LinkDB
All DBs
Position
complement(1589398..1591086)
Genome browser
AA seq
562 aa
AA seq
DB search
MSANASMEDFEALLNESFELATPQEGSVVKGRVLAIEAGQAIIDIGYKMEGRVDLKEFTK
PGHESEIAPGDEVEVYLDRVENARGEAVISRDKARREEAWDRLEKAYEGEERVEGAIFGR
VKGGFTVDLGGAVAFLPGSQVDVRPVRDPGPLMGMPQPFQILKMDRRRGNIVVSRRAVLE
ESRAEQRAEIVGRLTEGDVVEGVVKNITDYGAFVDLGGVDGLLHVTDMAWRRVNHPSEIL
SIGETVKVQVVKINKETQRISLGMKQLQADPWDNVAVKFPIGSKWTGRVTNITDYGAFVE
LEAGVEGLVHVSEMSWTKKNVHPGKIVSTSQEVEVMVLDVDSAKRRVSLGLKQCQGNPWD
NFAAAYPNGTEVEGEIKNITEFGLFIGLDGDIDGMVHLSDLDWNRSGEEAMKDYHKGDVV
QAVVLDVDVDKERISLGIKQLGGDPFADATAGVKRGAIVTVEVTKIEDGGIEVEHDGMKA
FIRRSDLARDRADQRPERFAVGDKIDARVTNIDKASRRLGLSIKAREIAEEKEAVEQYGS
SDSGASLGDILGAALKQRTGDE
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctaacgcctccatggaagacttcgaggccctccttaacgagagcttcgaactg
gcgacccctcaggaagggtccgtcgtcaaaggccgcgtcctggctatcgaagccggacag
gccatcatcgacatcggctacaagatggaaggccgtgtcgatctcaaggaattcaccaag
cccggccacgagtccgaaatcgcccccggcgatgaggtcgaagtgtatctcgaccgggtc
gagaacgcccgtggcgaggccgtcatcagccgtgacaaggcccgccgcgaggaagcctgg
gaccgcctggagaaagcctacgaaggcgaagagcgcgtcgagggcgccatcttcggccgc
gtcaagggcggcttcaccgtcgatctcggcggcgccgtggccttcctgcccggctcccag
gtcgatgtgcgccccgtgcgtgaccccggcccgctcatgggcatgccccagccgttccag
atcctcaagatggaccgccgccgcggcaacatcgtcgtgtcgcgccgcgccgttctcgaa
gagagccgtgccgagcagcgcgccgagatcgtcggtcgcctgaccgagggcgacgtcgtc
gaaggcgtggtcaagaacatcaccgattacggtgcgttcgtggacctcggcggtgtcgac
ggcctgctccatgtcaccgacatggcatggcgccgcgtgaaccatccttcggagatcctc
tcgatcggcgagaccgtgaaggtccaggtcgtgaagatcaacaaggaaacccagcgtatc
tcgctcggcatgaagcagcttcaggccgatccgtgggacaatgtcgcggtgaagttcccg
atcggctccaagtggaccggccgcgtgaccaacatcaccgattacggcgcgttcgtggag
ctggaagccggcgtcgagggcctcgtccacgtctccgagatgtcctggaccaagaagaac
gtgcacccgggcaagatcgtctccacctcccaggaggtcgaggtcatggtgctcgacgtg
gacagcgccaagcgccgcgtcagcctcggcctgaagcagtgccagggcaacccctgggac
aacttcgcggccgcctacccgaatggcaccgaagtcgaaggcgagatcaagaacatcacc
gaattcggtctgttcatcggtctggacggcgacatcgacggcatggtccacctgtcggat
ctcgactggaaccggtccggcgaggaagccatgaaggactaccacaagggcgacgtcgtc
caggcggtggtgcttgacgtggacgtggacaaggagcgcatctcgctcggcatcaagcag
ctcggcggcgacccgttcgctgacgcgactgccggtgtgaagcgtggcgccatcgtcacc
gtcgaggtcaccaagatcgaggacggcggcatcgaggtcgagcatgacggcatgaaggcc
ttcatccgccgctcggacctggcccgcgaccgcgccgatcagcgccccgagcgcttcgcc
gtcggcgacaagatcgatgcccgcgtcaccaacatcgacaaggcgtcgcgccgtcttggc
ctgtcgatcaaggcccgcgagatcgccgaagagaaagaggccgtggaacagtacggctcc
tcggactcgggtgcctcgctcggcgacatcctcggcgccgcgctcaagcagcgcaccggc
gacgagtga
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