Paroceanicella profunda: FDP22_13245
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Entry
FDP22_13245 CDS
T06319
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K12368
dipeptide transport system substrate-binding protein
Organism
ppru
Paroceanicella profunda
Pathway
ppru02010
ABC transporters
ppru02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FDP22_13245
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FDP22_13245
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppru02000
]
FDP22_13245
Transporters [BR:
ppru02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
FDP22_13245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF3123
DUF4092
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
QDL92667
UniProt:
A0A5B8FHW2
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All DBs
Position
complement(2951358..2952899)
Genome browser
AA seq
513 aa
AA seq
DB search
MTQTRRAFLQTGIGLGVGLSALGRLGLSAAVAQESGDLTIAYNVNLPSWDPTTGPSAVNP
TIQGIYQSVFDQFILQKPDLTFDAGLLTDWGWNEDRTQVFMVVREGVTWHDGAPFSAEDV
VFSLERAAKPETGSPIQFVWSKIGNFTIEGNRITGDVLEYDPTIFKWMSFLTGYVLPKAY
YEKVGPEGFEAAPIGTGPYKVEKFERNAFVRLTANPGYWGGAPAFETVTIKFVTDAASRV
AEVESGNSLVTLEIPYEEYDRLIAKDGLTGEAHPISDIGMIFLNDIDVMLDKNVRLAAHH
AIDKQLIIDRLLRGYGVPLATLETPEYAAYDPSITFEYDPEKAKELLAASGYSTDKPVTF
TIQTTRGFKPKDYEMIQAIVGMWRKVGIEAEIEVYEIAKHYELRAADQLAPAAFYNWGNS
VGDPTTSTGFAMFGPSPHSVWDSQDLIDRIIPLWGEQDEEKRIQGWKDVSRYIAEECYVI
PLLQYVQPIVHDAGIKVVPHASGALLPALMTPA
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgacccagacacgacgcgcatttctgcaaaccggtatcggcctcggcgtggggctctcg
gcgcttggcaggctcggcctttcggccgccgtggcgcaggagagcggcgacctcaccatc
gcctacaacgtgaacctgccctcctgggaccccaccaccggcccctccgcggtgaacccc
accatccagggcatctaccaatcggtcttcgaccagttcatcctgcagaaacccgacctc
accttcgatgccggcctgctcaccgactggggctggaacgaggacaggacgcaggtcttc
atggtggtgcgcgagggcgtgacctggcatgacggcgcgcccttctccgccgaggacgtg
gtgttctcgctggagcgcgcggcgaagccggagaccggcagcccgatccagttcgtctgg
tccaagatcgggaatttcaccatcgagggcaaccgcatcaccggcgacgtgctggaatac
gacccgacgatcttcaagtggatgagcttcctcaccggctacgtgctgcccaaggcctat
tacgagaaggtgggcccggaggggttcgaggccgcccccatcggcaccggcccctacaag
gtggagaagttcgagcgcaacgccttcgtgcggctgaccgcgaaccccgggtactggggc
ggcgcgccggccttcgagaccgtgaccatcaagttcgtcaccgatgccgccagccgggtg
gcggaggtggaatcgggcaattcgctcgtcacgctggagatcccctacgaagagtatgac
cggctgatcgccaaggacggcctgaccggcgaggcgcatccgatctccgacatcgggatg
atcttcctcaacgacatcgacgtgatgctggacaagaacgtccgcctcgccgcccatcac
gccatcgacaagcagctgatcatcgaccggctgctgcgcggctacggcgtgccgctcgcc
acgctggagacgccggaatacgccgcctacgacccctccatcaccttcgagtacgacccc
gagaaggcaaaggagctgctcgcggcctcgggttattccacagacaagccggtgaccttc
accatccagaccacccgcggcttcaagcccaaggattacgagatgatccaggccatcgtg
ggcatgtggcgcaaggtgggcatcgaggcggagatcgaggtctacgagatcgcgaagcac
tacgagctgcgcgccgccgaccagctcgcccccgccgccttctacaactggggcaactcg
gtgggcgatcccaccacctccaccggcttcgccatgttcggcccctcgccgcattccgtc
tgggacagccaggacctgatcgacaggatcatcccgctctggggcgagcaggacgaggag
aaacgcatccagggatggaaggacgtgagccgctacatcgcggaagagtgctacgtgatc
ccgctgctgcaatacgtgcagcccatcgtgcatgacgcgggcatcaaggtggtgccgcat
gcctccggcgcgctgctgccggcgctgatgaccccggcctga
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