Podospora pseudoanserina: QC764_602090
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Entry
QC764_602090 CDS
T09816
Symbol
MTR3
Name
(RefSeq) 3'-5'-exoribonuclease
KO
K12587
exosome complex component MTR3
Organism
ppsa
Podospora pseudoanserina
Pathway
ppsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QC764_602090 (MTR3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppsa03019
]
QC764_602090 (MTR3)
Messenger RNA biogenesis [BR:
ppsa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
QC764_602090 (MTR3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
87969587
NCBI-ProteinID:
XP_062797534
LinkDB
All DBs
Position
6:complement(1830706..1831843)
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AA seq
287 aa
AA seq
DB search
MADRRRINGPPGATMAPVFEDDAGQPEIKNGKGRDRAPNVIRKTFLKTGVTPSASGSAYL
EFEGSSKSGVSGLKLSCTVHGPRSLPRSSPFSPHIVLSAHVKYAPFATKQRRGYLRDPSE
RDLGTHLETALRGAIIADRWPKSGVDIIISIIEGDQDRETSKSQGDETWDMMNVLSGCIT
VASAALADAGIDCVDTVAGGVAALVQDAGEDSTPRIVVDPIPSDHEKVLGACCVAYLPTR
DEITNLWFKGDLPAADAGLYTQLVENGIQASRTANRVLVECLCEATS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagaagacgtatcaacggccctcctggggccacaatggcgccagtatttgaa
gatgacgccggtcaaccagagatcaagaacggcaagggaagagatcgggcaccaaatgtc
attcgcaagacgtttctcaagacaggcgtaactccatcagcttctggttccgcctatctg
gagtttgaagggtccagcaagagtggtgtctcagggttgaagctcagctgcacagtccat
gggccacgatctctcccaagatcaagcccattctcacctcacatcgttttgtcagcccat
gtcaaatatgcgccatttgctacaaagcagagacggggctatctacgagaccccagtgag
agagatctcggcacccatcttgaaacagctcttcgtggggccatcattgcagatcgctgg
ccgaagagcggtgtcgatattatcatctcgatcatcgaaggagaccaagacagagagaca
tcaaaatctcaaggagatgagacttgggacatgatgaacgtgttgagtgggtgcatcaca
gtggcttcagctgcattggcagacgctggtatcgattgtgtggacactgttgccggaggt
gttgctgcactcgttcaagatgccggcgaggactcaacgcctaggattgtcgttgacccc
attccgtcggatcacgaaaaggtattgggggcttgctgcgtagcctatctgcccacaaga
gacgagatcaccaacttgtggttcaagggtgatctgccagccgccgatgctggtctgtac
acgcagttggtggagaacggcattcaagcttcaagaaccgccaaccgggtgcttgttgag
tgcctgtgtgaagctacgagctaa
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