Podospora pseudocomata: QC762_506320
Help
Entry
QC762_506320 CDS
T09797
Symbol
RAD54
Name
(RefSeq) DNA-dependent ATPase protein rad54
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ppsd
Podospora pseudocomata
Pathway
ppsd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QC762_506320 (RAD54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsd03400
]
QC762_506320 (RAD54)
DNA repair and recombination proteins [BR:
ppsd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
QC762_506320 (RAD54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Rad54_N
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
87910961
NCBI-ProteinID:
XP_062742210
LinkDB
All DBs
Position
5:complement(2393882..2396816)
Genome browser
AA seq
838 aa
AA seq
DB search
MATRCLKSTLLPIRAKLSNTGTFLAAYIKTVSSQSLRLLIPNIPAANKENVGAPRSKFPT
PQSLDRLRTPFKCPGSATRTVATDRPARKKRRIDYKGTDGGVDPDADKPYTNADRLALAN
RDANKFPVFQPKDKTTVFRKAFSVPLLNKDSAAYNPNRPPPTLGLRQGAVFVAKPLHDPS
GEFAIVLYDPTVDDKPKDAPKPEEKVEEEKIVEPLEHKSLAEILGIKKKVVGEHPRVPVV
IDPKLAKILRPHQIEGVKFMYKCVTGMVDEKAHGCIMADEMGLGKTLQCITLLWTLLKQS
PDAGKTTIQKAIVACPASLVRNWANELVKWLGPDATTPFAIDGKASKEELTRQLRQWAIA
TGRAVTRPIIIVSYETLRLNCEELRNTEIGLILCDEGHRLKNNDNKLFTALNGLNVKRRV
ILSGTPIQNDLSEYFSLISFANPDLLGTHLEFRKRFEIPILRGRDSMASEAERKRGDECL
AELATIVNKFVIRRTNDLLSKYLPIKYEHVVFCNLAPFQLDLYNYFLTSPDIQALLRGKG
SQPLKAIGILKNLCNHPDLLKLPDDLPGSEQHYPDDYVPRDSRGRDRDIKPWYSGKMQVL
DRMLARIRADTNDKIVLISNYTQTLDLFEKLCRSRAYPCLRLDGKMLVNKRQKLVDKFND
PNGDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRF
IATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRPDTKSDTHDTFKC
KRCKSDGKQFIKAPAMLYGDTSTWNHFVNEGLKGIQDLLLRQEMGEREVSAVFQYISH
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcgctgcctaaagtcaacattattaccaatccgcgccaaactttccaacact
ggcacgtttctcgccgcctacatcaaaaccgtttcctcccagagcttgcgccttttgata
ccaaacattcccgccgcgaacaaggagaacgtcggtgctccccgaagcaaattccccaca
ccacaatcactcgaccgcctccggacgccgttcaaatgcccagggtcggccactcgcacc
gttgctaccgaccgcccagctcgcaagaagcggagaatcgattacaagggcacagatgga
ggcgttgatccggatgccgacaagccctacacaaatgccgaccggctagccctggcgaat
cgcgacgccaacaagttcccagtattccagccaaaagacaagaccacagtgtttcgcaaa
gccttttcggttcctctcctgaacaaagatagcgctgcctacaaccccaatcgcccccca
ccaacacttggcttaagacagggagctgtatttgtcgcaaagcctctgcacgatccaagt
ggcgagttcgccattgtcctgtatgatccaacagttgacgacaagccaaaggatgcgcct
aagccagaggaaaaggtcgaagaggaaaagatcgttgagcccttagagcacaagagtctc
gccgagatcttggggatcaagaagaaggttgttggagagcacccaagggtaccggtggtc
atcgatccaaagcttgccaagattctccgcccacatcagattgaaggtgtcaagtttatg
tacaagtgtgtgacgggcatggtggatgaaaaggcacatgggtgcatcatggccgatgaa
atgggtcttggcaaaacgctacaatgcatcacactgctgtggacactgctcaagcagtct
cctgatgctggtaagacaacaatccagaaagctattgttgcctgcccagcaagtctggtg
cgcaactgggccaacgagttggtcaagtggttgggtccggatgctacgacgcctttcgct
attgacggcaaggcttcaaaagaggaactgacccgacagcttcgccagtgggccattgca
accggacgagccgtcacgagacccatcatcatcgtctcatatgagaccctccgtctgaac
tgcgaagagctcagaaacacagagatcggactgattctctgcgacgaaggtcaccgtctg
aagaacaacgacaacaagttattcactgccctgaacggcctcaatgtcaagcgtcgcgtg
attctctctggtacacccattcaaaacgatttgtccgagtacttttcactcatcagcttc
gccaacccggatctactgggtacacacctcgagttccgcaaacgcttcgagattcccatt
ctccgtggccgtgattccatggcctctgaggctgagaggaaacgcggtgatgaatgtctt
gccgagctggccaccatcgtcaacaagttcgtcattcgccgtaccaacgatctgctgtcc
aagtacttgcccatcaagtacgagcacgtcgtcttctgcaacctggcccccttccagctc
gacctctacaactacttcctcacctcgccagacatccaagcccttctccgtggcaaaggc
tcccagccgctcaaggccattggtattctcaagaacctatgcaatcacccagatcttctc
aagctccccgatgatctgcccggctctgaacaacattaccccgatgactatgtccccagg
gactctcgtggccgcgatcgcgacatcaagccatggtactcgggcaagatgcaagtcctc
gaccgtatgctggcccgcatccgcgccgacacaaacgacaagattgtcctcatcagcaat
tacacccaaaccctcgacctcttcgagaagctctgtcgcagccgcgcctacccctgcctc
cgtctcgacggtaaaatgctggttaacaagcgccagaagctcgtcgacaagttcaacgac
cccaacggcgacgaattcgtcttcctcctttccagcaaggcaggtggctgcggtctcaac
ctcatcggcgccaatcgcctcgtcctcttcgaccccgattggaaccctgccgctgaccag
caagctctcgctcgtgtctggcgtgatggccagaagaaggattgtttcgtctaccggttc
attgccacgggaacaatcgaggaaaagatctttcagcgtcaatcgcacaagcagagtttg
agttcatgtgtggtggattcggcggaggatgtggagaggcattttagcttggacagcttg
agggagctgttccagtatcggcctgatacgaagagcgatacgcatgatacgttcaagtgc
aagaggtgcaagtcagatgggaagcagtttatcaaggccccggccatgttgtatggtgat
acgagtacgtggaatcattttgtgaatgaggggttgaaggggatacaagatttgttgctg
aggcaggagatgggggagagggaggtgagtgcggtgtttcagtacatttctcattaa
DBGET
integrated database retrieval system
