Pseudomonas psychrotolerans: BJP27_23470
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Entry
BJP27_23470 CDS
T05074
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ppsl
Pseudomonas psychrotolerans
Pathway
ppsl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BJP27_23470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsl03400
]
BJP27_23470
Enzymes [BR:
ppsl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BJP27_23470
DNA repair and recombination proteins [BR:
ppsl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BJP27_23470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Sel_put
Motif
Other DBs
NCBI-ProteinID:
APQ14297
LinkDB
All DBs
Position
complement(5197303..5198091)
Genome browser
AA seq
262 aa
AA seq
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MAGLTLATYNVNGIRARLPILLQWLERERPDIVCLQELKAKATDFPQAELEAAGYGALWD
GQPSWNGVAILARDDQPLEIRRGLPGMENDPQRRYLEAAVKGVIVACLYLPNGNPWPGPK
FDYKLAWFERFIEHAQGLLDSGHPVVLAGDYNVVPTDRDIYDPKSWRKDALLQPESRACF
QRLLDQGWLDALRARHPDEAIYTYWDYFRQRWQRNAGLRIDHLLLSPALAPHLKDAGVHR
WVRDLEKTSDHAPTWIGIAAPT
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggctggcctgactctcgcgacctacaacgtcaatggcatccgcgcccggctgcccata
ctgctgcaatggctggagcgggaacgcccggacatcgtctgtctgcaggaactcaaggcc
aaggcgaccgatttccctcaggcggaactggaagcggcaggctacggtgcgctctgggat
ggccaaccctcctggaacggggtggccatcctggcgcgcgacgatcaaccgctggagatc
cgccgcggcctacctgggatggagaatgaccctcagcgtcgctatctcgaagcggcggtg
aaaggcgtgatcgtggcctgcctctacctacccaatggcaacccctggccgggacccaaa
ttcgattacaagctggcctggttcgaacgcttcatcgagcatgcccaggggttgctcgac
agtggccatcccgtggtgctcgcgggtgactacaacgtagtgcccaccgaccgcgacatc
tacgatcccaagtcctggcgcaaggacgccctgctgcaacccgagagtcgcgcctgtttc
caacgcctgctcgaccagggttggctggatgccctgcgcgcccgacacccggatgaggcg
atctacacctattgggactattttcggcagcgctggcaacgcaatgcggggctgcgcatc
gaccatctgctattgagccccgcgctggcaccccacctcaaggacgccggcgtgcaccgc
tgggtacgggacctggagaaaaccagcgatcacgcccctacctggattggcatcgcggcg
ccgacctag
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