Psychrobacillus psychrodurans: ACQCPR_05070
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Entry
ACQCPR_05070 CDS
T11278
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ppsn Psychrobacillus psychrodurans
Brite
KEGG Orthology (KO) [BR:
ppsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsn03400
]
ACQCPR_05070 (addA)
Enzymes [BR:
ppsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACQCPR_05070 (addA)
DNA repair and recombination proteins [BR:
ppsn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ACQCPR_05070 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
AAA_16
Motif
Other DBs
NCBI-ProteinID:
XSZ06401
LinkDB
All DBs
Position
1100777..1104490
Genome browser
AA seq
1237 aa
AA seq
DB search
MNIPNMPAELTWTAAQWKAIWATGSDVLVSAAAGSGKTAVLIDRLIQKVIAKEQPINVDE
LLVVTFTNASAAEMRHRMAEALEKAIANDPTSNHLRKQLSLLNKAQISTLHSFCLNIVRQ
YAYMLTIDPGFRIANETEAAIMRDDMLAEVLEEAYHVDNPEAMYRLSDSFTSDRDDQSIE
VMIEKLYSYSRVHPEPQKWLLAIPEAYNLPVDMSIDELSFMGPLKLAIIHHLEEAIAVTE
EIRRLANEPNGPAPLAETAMIDQQMIQEAVDLMKNSSWQSVFHYFQGIKWGRAAAIKKDS
CDEGMKNQATDKRTKVKKIINDLKDNYFTRTPERLLEEMRLMAPQLQKLVELTIVYGERY
TAAKNEKGLVDFSDLEHFALDILSEQDENGELIPSDIAKEYKSRFKEVLVDEYQDTNLLQ
ETILQFVKSGDENTGNMFMVGDVKQSIYRFRLAEPMLFLGKYLAFNDLPINSGIKIDLNA
NFRSRKEVLHATNYIFSQIMGESVGEIVYDEAASLKPGAPYEETETPVELALLYEVEDGS
AEPLEEEEETIEAIAEEELKKSQAEARYIISKINEMIHSKQTVYDPWKKAHRPVEYSDIV
ILMRSMTWSGEVTEQFKEAGIPLYAELSKGYFEAIEVLIMLHTLRAIDNPYQDISLASVL
RSPFVGLTESELALIRLSAPKEPFYDALKTFVSTGGPGLSADTAEKLQRFLLQYEDWRDL
SRRGSLADLIWQIYLDTHYYEIVGAMPNGKQRQANLRILHDRAIDYEKTSFRGLFRFLRF
IDRMRKRGDDLGAARAIGEKENVVRLMTIHSSKGLEFPVVFLAGMGRPFNQMDFNESYLF
DQSFGLAVKAIDPEKRISFTSLPFLSMKEKKQMELKAEEMRVLYVAMTRAKEHLYLIGSI
KDLAKTLAKWQDAQNVLSDEMLPDYMRAKAKGYLDWIGPALSRHTNFRQLSDVNEANIVD
SESNWRIVAKCVNDLKHIVQVEEKEAVKLDQLIDPTQNIYLKKIQERFDTTYLHEITTHK
RSKQTVSEMKRIQQLMDQSDDDYFQMSSPTSLKKIAKRPFFLQQEAKLTGAEAGTAVHAF
MQNVDLHEEKNEEQVLLFAERLAEREILTKAEQAAINPNKMVPFFSSEIAKRLRNAKEVM
REFPFTYALEDNDGDKQIIQGVVDCLFLEDDGRWVLLDYKTDKVKHLVNNESLLQQEMQK
RYQLQLSLYTQAIEAILQVEIKEKVLYLFDINRTVSF
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgaacattcctaatatgccagcagagctaacatggacagctgcacaatggaaggcaatt
tgggctacgggttcagatgtgctcgtttccgcagctgcaggatctggaaaaacagctgtc
ctcatcgaccgcctcattcaaaaggttattgcgaaagaacaacctatcaatgttgacgag
ttattagttgttacatttaccaatgcttccgctgcagaaatgcgtcaccgaatggcagag
gcgcttgaaaaggcaatagcaaacgatccaacatcaaatcatttacgaaaacaactaagt
ttgttaaataaagcacaaatttctacgctgcattcattttgtttaaacattgtacggcaa
tatgcatatatgctaacgatagatccaggtttccgtattgcaaatgaaacagaagcagca
atcatgcgtgacgatatgttagcagaagtattagaagaagcttatcatgttgacaatccg
gaggcgatgtaccgattgtctgatagtttcacctccgatcgtgacgatcaatcaattgaa
gtgatgattgaaaaactatattcctattcgcgcgttcatccagagccccaaaaatggttg
ttggcaattccagaagcttataatctgccagtagatatgtctatagacgaactatcgttt
atgggtccgttgaagcttgcaatcatccatcatttagaagaagcgatcgctgtaaccgag
gagattcgtagacttgcaaatgaaccaaatggcccggcacctcttgcagaaactgctatg
atcgatcagcaaatgattcaagaggcagtagatttgatgaagaatagctcgtggcaaagt
gtttttcattacttccaaggcattaaatggggaagagcagcagccataaaaaaagattcc
tgtgatgaaggaatgaaaaatcaagcgacagacaaacggactaaagtgaagaaaattatt
aatgacttaaaggataattattttacacgaactccagaacggctcttggaggaaatgcgt
ttaatggcacctcagctacaaaaactagtagaactgactatagtttatggagaaaggtat
actgcagctaaaaatgaaaagggtctcgtcgacttttcagatttggagcattttgcatta
gatattctatccgagcaggatgaaaatggtgaacttataccatcagatattgcgaaggaa
tataagtctcgttttaaagaagtacttgtagatgaatatcaggatactaatctactacaa
gaaaccattttacagtttgtgaaaagtggcgatgaaaatacagggaatatgttcatggta
ggcgacgtgaagcagtccatatatcgattccgtttagcagaaccaatgctatttttaggg
aaatatcttgcattcaatgatcttccgattaattcaggcatcaaaatagatttaaatgct
aacttccgcagtagaaaggaagtgttacatgcaaccaactatattttcagtcaaattatg
ggtgagtcagtaggagaaattgtgtatgatgaagcagcatcgttaaagccaggagcaccc
tatgaagaaactgaaacacctgttgagcttgctctattatatgaagtagaagatggcagt
gcagaaccgttagaggaagaggaagaaacgatagaagcaattgctgaagaagagttaaaa
aaatcgcaagccgaagcacgttatattatttcaaaaataaacgagatgattcactctaaa
caaactgtctatgatccatggaaaaaagctcatcgtcccgtcgagtacagtgacatcgtt
atattgatgcgctcgatgacttggtcaggagaggttacagagcaatttaaagaagctggt
attcctttgtacgccgaactttcgaagggatattttgaagcaattgaagttcttataatg
cttcatacgcttcgtgcaatagataatccctatcaggatatatcacttgcatccgttctc
aggtcgccatttgtaggactaacagagtcagagctcgcacttatccgtttatctgctcca
aaagagcctttctacgatgcattaaaaacttttgtatctaccggagggccgggactgtct
gcagatactgctgagaaactacaaaggttcttacttcaatatgaggattggcgcgattta
agtagaagaggttcacttgcggatttaatatggcaaatatacttggatacacattactac
gaaatagtaggtgctatgccaaatggtaaacaaagacaagcaaaccttcgtattcttcat
gaccgtgcaatcgattatgagaaaacttccttccgaggactgttccgttttttacgtttt
atcgatcgtatgcgtaaaagaggggatgatttaggtgctgcacgagctattggtgaaaag
gagaatgttgttcgtttaatgactatccactcatccaaaggtttagaatttccagttgtt
tttttagctggaatgggtagaccttttaaccaaatggattttaatgagtcctacttgttt
gaccaatcgtttggtcttgctgttaaagcaattgatccggaaaagcgtatttcatttact
tcattgccatttttatctatgaaagaaaaaaagcagatggagttgaaggcggaggaaatg
cgggttttatatgtggccatgacgcgtgcaaaagagcatttatacctcattggatctata
aaagatttagcaaaaacattggcaaaatggcaagatgcccaaaacgtattaagtgatgaa
atgctgccggactatatgcgtgcaaaagcaaaagggtatttagattggattggtccagcc
ttatcaagacatacaaatttccgccagttatcggatgtaaatgaagcgaatatagtggat
agtgaatcgaattggagaattgtcgctaaatgtgtaaatgatttaaagcatattgtacaa
gtggaagaaaaagaggctgttaaattggaccagttgattgatccaacacaaaatatatat
ttaaagaagattcaggaacgttttgatacaacatacttgcatgaaataactactcataaa
cgatcaaagcaaacggtaagtgagatgaaaagaatacagcaacttatggaccaatcagat
gatgactattttcaaatgtctagtcctactagtctgaaaaagattgcgaagcgtccattt
ttccttcagcaagaagcaaaattgacaggggcagaagcaggtactgcggtacatgctttt
atgcaaaacgttgatcttcacgaagaaaaaaatgaggagcaggttctgctatttgcagaa
agactggctgaaagggaaattttaacgaaagctgaacaagctgcgattaatccaaacaaa
atggtacctttcttcagctcagaaatagcaaaacgtttacgaaatgcaaaagaagtgatg
agagaatttccttttacgtatgcactagaggataatgatggcgacaaacaaattatccaa
ggagtcgtcgattgcttatttttagaggatgatgggcgttgggttttattggattataaa
acggataaagttaaacatttagttaataacgagtctttattacagcaagaaatgcaaaaa
cgttatcaacttcaattgtcactttatacacaggcaattgaagcaattttacaagtagag
attaaagagaaagtattatacttgtttgacataaatagaacagtgtcattttag
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