Podospora pseudopauciseta: QC763_506320
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Entry
QC763_506320 CDS
T09815
Symbol
RAD54
Name
(RefSeq) DNA-dependent ATPase protein rad54
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
ppsp
Podospora pseudopauciseta
Pathway
ppsp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
QC763_506320 (RAD54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppsp03400
]
QC763_506320 (RAD54)
DNA repair and recombination proteins [BR:
ppsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
QC763_506320 (RAD54)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Rad54_N
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
87933565
NCBI-ProteinID:
XP_062764491
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Position
5
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AA seq
838 aa
AA seq
DB search
MATRCLKSTLLPIRAKLSNTGTFLAAYIKTLSSQNLRLLIPNTPAANKENVGAPRSKFPT
PQSLDRLRTPFKCPGSATRTVATDRPARKKRRIDYKGTDGDVDPDADKPYTNADRLALAN
RDANKFPVFQPKDKTTVFRKAFSVPLLNKDSAAYNPNRPPPTLGLRQGAVFVAKPLHDPS
GEFAIVLYDPTVDDRPKDAPKPEEKVEEEKIVEPLEHKSLAEILGIKKKIVGEHPRVPVV
IDPKLAKILRPHQIEGVKFMYKCVTGMVDEKAHGCIMADEMGLGKTLQCITLLWTLLKQS
PDAGKTTIQKAIVACPASLVRNWANELVKWLGPDATTPFAIDGKASKEELTRQLRQWAIA
TGRAVTRPIIIVSYETLRLNCEELRNTEIGLILCDEGHRLKNNDNKLFTALNGLNVKRRV
ILSGTPIQNDLSEYFSLISFANPDLLGTHLEFRKRFEIPILRGRDSMASEAERKRGDECL
AELATIVNKFVIRRTNDLLSKYLPIKYEHVVFCNLAPFQLDLYNYFLTSPDIQALLRGKG
SQPLKAIGILKNLCNHPDLLKLPDDLPGSEQHYPDDYVPRDSRGRDRDIKPWYSGKMQVL
DRMLARIRADTNDKIVLISNYTQTLDLFEKLCRSRAYPCLRLDGKMLVNKRQKLVDKFND
PNGDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRF
IATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRPDTKSDTHDTFKC
KRCKPDGKQFIKAPAMLYGDTSTWNHFVNEGLKGIQDLLLRQEMGEREVSAVFQYISH
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcgctgcctaaagtcaacattattaccaatccgcgccaaactttccaacact
ggcacgtttctcgccgcctacatcaaaaccctttcctcacagaacttgcgccttttgata
ccaaacacccccgccgcgaacaaggagaacgtcggtgccccccgaagcaaattccccaca
ccacaatcactcgaccgcctccggacgccgttcaaatgcccagggtcggccactcgcacc
gttgctaccgaccgcccagctcgcaagaagcggagaatcgactacaagggcacagatgga
gacgttgatccggatgccgacaagccctacacaaatgccgaccggctagccctggcgaat
cgcgacgccaacaagttcccagtattccagccaaaagacaagaccacagtgtttcgcaaa
gccttttcggttcctctcctgaacaaagatagcgctgcctacaaccccaatcgcccccca
ccaacacttggcttaagacagggagctgtatttgtcgcaaagcctctgcatgatccaagt
ggcgagttcgccattgtcctgtatgatccaacagttgacgacaggccaaaggatgcgcct
aagccagaggaaaaggtcgaggaggaaaagatcgtcgagcccttagagcacaagagtctc
gccgagatcttggggatcaagaagaaaattgttggagagcacccaagggtaccggtggtc
atcgatccaaagcttgccaagattctccgcccacatcagattgaaggtgtcaagtttatg
tacaagtgtgtgacgggcatggtggatgaaaaggcacatgggtgcatcatggccgatgaa
atgggtcttggcaaaacgctacaatgcatcacactgctgtggacactgctcaagcagtct
cctgatgctggcaagacaacaatccagaaagctattgttgcctgcccagcaagtctggtg
cgcaactgggccaacgagttggtcaagtggctgggtccggatgctacgacgcctttcgct
attgacggcaaggcttcaaaagaggaactgacccgacagcttcgccagtgggccattgca
accggacgagccgtcacgagacccatcatcatcgtctcatatgagaccctccgtctgaac
tgcgaagagctcagaaacacagagatcggactgattctctgcgacgaaggtcaccgtctg
aagaacaacgacaacaagttattcactgccctgaacggcctcaatgtcaagcgtcgcgtc
attctctctggtacacccattcaaaacgatttgtccgagtacttttcactcatcagcttc
gccaacccggatctattgggtacacacctcgagtttcgcaaacgcttcgagattcccatt
ctccgtggccgtgattccatggcctctgaggctgagaggaaacgtggtgatgaatgtctt
gccgagctggccaccatcgtcaacaagttcgtcattcgccgtaccaacgatctgctgtcc
aagtacttgcccatcaagtacgagcacgtcgtcttctgcaacctggcccccttccagctc
gacctatacaactacttcctcacctcgccagacatccaagcccttctccgtggcaaaggc
tcccagccactcaaggccattggtattctcaaaaacctatgcaatcacccagatcttctc
aagctccccgatgatctgcccggctctgaacaacattaccccgatgactatgtccccagg
gactctcgtggccgcgatcgcgacatcaagccatggtactcgggcaagatgcaagtcctc
gaccgtatgctggcccgcatccgcgccgacacaaacgacaagattgtcctcatcagcaat
tacacccaaaccctcgacctcttcgagaaactctgtcgcagccgcgcctacccctgcctc
cgtctcgacggtaaaatgctggttaacaagcgccagaagctcgtcgacaagttcaacgac
cccaacggcgacgaattcgtcttcctcctttccagcaaggcaggtggttgcggtctcaac
ctcatcggcgcgaatcgcctcgtcctcttcgaccccgattggaaccctgccgctgaccag
caagctctcgctcgtgtctggcgtgatggccagaagaaggattgtttcgtctaccggttc
attgccacgggaacaattgaggaaaagatctttcagcgtcagtcgcacaagcagagtttg
agttcgtgtgtggtggattcggcggaggatgtggagaggcattttagcttggacagcttg
agggagctgttccagtatcggcctgatacgaagagcgatacgcatgatacgttcaagtgc
aagaggtgcaagccagatgggaagcagtttatcaaggcgccggccatgttgtatggtgat
acgagtacgtggaatcattttgtgaatgaggggttgaaggggatacaagatttgttgctg
aggcaggagatgggggagagggaggtgagtgcggtgtttcagtacatttctcattaa
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