Pungitius pungitius (ninespine stickleback): 119195262
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Entry
119195262 CDS
T07626
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119195262
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119195262
Ion channels [BR:
ppug04040
]
Ligand-gated channels
GABA-A
119195262
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
119195262
NCBI-ProteinID:
XP_037305968
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MHTDVVLLFLLVWSAGASGQTRPKAQTLQRCRNVRLKREMPLTEGARRFRNTSSIFKRSP
DITKVWGPKSEQLLKIDNHDFTMRPGFGGPAVPVGVDVQVESLDAISEVDMDFTMTLYLR
HYWKDERLAFKSNTNLSMTFDGRLVKKIWVPDMFFVHSKKSFTHDTTTENVMLRVYPDGK
VLYSLRVTVTSMCSMDLSRFPLDTQTCSLEIESYAYTDDDLMLYWKEGNRSLNTDEKISL
SQFLIQKFHTTTRLAFYSSTGWYNRLYITFTLRRHVFFFLLQTYFPATLMVMLSWVSFWI
DRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAV
NYLSTLQERKERLLRERLPCTCGLAHPGMMSASYSEVEANATGNYGLPESNGVKRERMLV
QLAMESDQVTGHVGSSAYSNVWIDTHVIDKYSRVLFPGSYVLFNIFYWSIYSQTG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgcacacggacgtggtgctgctcttcctgctggtctggtcggccggtgcgtccgggcag
acgcgcccgaaggcgcagacgctgcagcggtgccggaacgtcagattgaaaagagaaatg
cctctgacggaaggagcccgccgcttcaggaacaccagctccattttcaagaggagtccc
gacatcactaaagtctggggcccgaagtccgagcagctgctgaagatcgacaaccacgac
ttcaccatgcggccggggttcggagggcccgcagtcccggtgggagtggatgtgcaggtg
gagagcctggacgccatctcggaggtggacatggacttcaccatgacgctgtacctgagg
cactactggaaggacgagaggctggccttcaagagcaacaccaacctcagcatgaccttc
gacgggcgcctggtgaagaagatctgggtgcccgacatgttcttcgtccactccaagaag
tccttcacccacgacaccaccaccgagaacgtcatgctgcgggtttacccggacggaaaa
gtcctctacagcctgcgggtgacggtcacgtccatgtgcagcatggacctgagccgcttt
cctctggacacgcagacgtgctccttggagatagagagctacgcctacacggacgacgac
ctgatgctctactggaaggaagggaaccgctcgctcaacacggacgagaagatttccctc
tcccagttcctcatccagaagttccacaccaccaccaggctggccttctacagcagcacg
ggctggtacaaccgtctgtacatcaccttcaccctgcggcgccacgtcttcttcttcctg
ctgcagacctacttccccgccaccctgatggtcatgctgtcctgggtgtccttctggatc
gaccgcagggccgtccccgccagggtgccgctgggcataaccacggtgctcaccatgtcc
accatcatcaccggggtcaacgcctccatgcccagggtgtcctacatcaaggccgtggac
atttacctctgggtcagcttcgtcttcgtcttcctctcggtgatagagtacgccgccgtc
aactacctgtcgactctgcaggagcgcaaggagaggctcctccgggagaggctgccgtgc
acctgcggcctggcccatcccggcatgatgtcggccagctacagcgaggtggaggccaac
gccacggggaactacggcctgccggagtccaacggcgtgaagcgggagaggatgctggtg
cagctggcgatggagagcgaccaggtcacgggccacgtcggctccagcgcctacagcaac
gtgtggatcgacacgcacgtcatagacaagtactcccgggtcctcttccccggctcctac
gtcctcttcaacatcttctactggtccatctactcgcagacgggatga
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