Pungitius pungitius (ninespine stickleback): 119197089
Help
Entry
119197089 CDS
T07626
Symbol
cngb1a
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3 isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
119197089 (cngb1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119197089 (cngb1a)
Ion channels [BR:
ppug04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
119197089 (cngb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
119197089
NCBI-ProteinID:
XP_037308966
LinkDB
All DBs
Position
4:complement(25779520..25820617)
Genome browser
AA seq
1111 aa
AA seq
DB search
MFLLCFYISVDDSKPEEEGLMAWIAEGLEKVVPQPDVKTKGTPAAQQPAEVHQTSAATVL
QVTNAEVGSTREDNKPIPPRMMDWIKHGLEKVVPQPQTHVPSKTEVNQKPEAPPEAAEAP
PLELALPPCPKPSVDNENIMGWIVSGFGRMLPRPVLKTEAARDEVQNINIVQNKTDLVLE
DMGQDEDKGTNQREDVTAETELTRVDRSSPPMDSMEKEAGDLVLAHMEDRLQQERLLEAA
RVAEEMARKAAEEAARQLGVEHSAKIVMETLPESNEQLPNILEEENEDDPEQEPLPFSSR
SLMDVCPADETLSSTQVEPASERRDLDSADHQTITQQPEPEAPVSSPTDQDDAADSGCGG
RCGGSVGGALELRMEDWHREERKGKGLNIPKIITTPEPECGALSAPLSKLSAADDNGDEL
KTWLSDGDLLTPDNEECLQSASSLVVQERLSNLVELFKDRTQRQKERLVDQDESEEESPS
ASQSKAPPPPPPPPEEKKDDPPPAVGEEEEDCILPFQLLGRPVKIPKLTGLPRLPDWVRV
LMKFHFPSSIDPFTDLIYVVWLFCVVAAWNWNVWLIPVRWAFPYQTPENLHLWLLVDYTC
DLIYVTDILLMQPRLQFVRGGDIVSDKKDMRENYMTTERFKMDIISLFPMEILYVFTGVN
SLLRFPRLLKYMAFFEFNDRMEAVMKKAYIYRVIRTSTYLLYSLHINACLFYWGSDYEGL
GSTKWVYDGKGNAYIRCYYFAVKTLITIGGLPDPTTVFEICFQLINYFVGVFAFSIMIGQ
MRDVVGAATAGENYYRACMDSTIQYMNSYHIPGQVQNRIKTWYDYTWKIQGMLDEQELLV
QLPAKMRLDMAVDVNYSIVSKVALFQGCDRQMVFDLLTRLKSVVYLPGDFVCKKGEIGRE
MYIIKQGEVQVVGGPDLQTVFVTIRSGSVFGEISLLAGGGGNRRTANVKVHGFANLFILD
KKDLAEILVNYPESQKLLRKKAKTMLTKDQKTEEKVGAKEAVQVIPPRPDTPEMFKAALK
VSQQAGLEGAFTQLRRTYQSSESTDRQDPPPTYQAPPPSPMHRRSPVPPLTAATDDDDAV
SESADSSVLIRMTPRQRGEELLTVEVTPGGE
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgtttcttctgtgtttttacatctctgtggacgacagtaaacctgaagaagaagggttg
atggcttggatcgctgagggtttggagaaagttgtccctcagcctgatgtgaagacgaag
gggacaccagcagctcaacagccggccgaggtacatcaaacatcagctgcaacagtgctt
caagtcactaatgcggaggtgggatcaacccgagaggacaacaagccaatcccccccaga
atgatggattggatcaaacacgggttagagaaggtggttcctcagcctcagactcatgtt
ccctcaaagactgaagtcaaccagaaacctgaagctccccctgaagcagcagaggctccg
cccttagaactggctctacctccatgtccaaaaccatcggttgacaatgaaaatattatg
ggatggatcgtcagcgggtttggccgcatgttgcctcggccggtactgaagacggaggcg
gcccgtgatgaggtgcagaacataaacattgtacagaataagacggacctggtgctggag
gacatgggacaggatgaggataaagggaccaatcagagggaggatgtgacagcagagaca
gagttgactcgggtagatcgaagctctccaccaatggacagcatggagaaggaggctgga
gacttagttctggcacacatggaggacagactgcagcaggagcgtctgctggaggcagcc
cgtgtggcagaggagatggccaggaaggccgccgaggaggcggcccgacagctgggggtg
gagcattcagctaagatcgtcatggaaacactgccagagtccaacgagcaactgcccaac
atccttgaggaggaaaatgaggacgatccagagcaggaacctttgcccttctcgtccagg
agcctgatggacgtctgtccggctgatgaaactttgtcatcaacacaagtggaaccggca
tcggagaggagagacctggacagtgcagaccaccagaccatcacccagcaacccgagcca
gaagctccggtatcctcccccacagatcaggatgatgcagcagatagtggttgtggaggc
cgctgtggtggaagtgtgggtggagctctggagctgaggatggaggattggcatcgggag
gagaggaagggaaaaggcctgaacatccctaaaattatcacaaccccagagccagagtgc
ggagctctgagtgcaccgctgtccaagctgagtgctgccgatgacaacggtgatgaactg
aagacctggttaagcgatggagacctacttactccagacaatgaagagtgtcttcagtca
gcaagcagcctggtagtccaggaacgtctcagtaacctcgttgagctgtttaaagatcgg
acgcagcggcagaaagagcgcttggtggaccaggacgagtccgaggaagaaagtccttca
gcctcccagagcaaagctcctcctcctcccccccctcctccagaagagaaaaaagatgac
cccccgccagcagtgggagaggaagaagaggattgtattctcccctttcaactcctggga
cgtccagtgaagattcctaaacttacaggtctcccccggctgccggactgggtcagagtc
ctgatgaagttccacttcccttccagcatcgacccattcactgatctgatctacgtggtc
tggctcttctgcgtggtggcggcctggaactggaatgtgtggttgattcccgtccgctgg
gcctttccctaccagacccctgagaacctccacctgtggctcctggtggactacacctgt
gacctgatctacgtcaccgacattctgctgatgcagccccgccttcagtttgtccgagga
ggagatattgtgagcgataagaaggacatgagggagaactacatgaccactgagagattc
aagatggacatcatcagcttgttccccatggagatactttacgttttcactggagtcaac
tctctgttgaggttccctcgactcctgaagtacatggcattctttgagtttaatgatcgg
atggaggctgtgatgaagaaagcatacatctacagggtgatccggacgtccacctacctg
ctctactctctgcacatcaacgcgtgtctcttttattggggatcagactatgaaggcctc
ggatccaccaagtgggtctacgacgggaaaggaaacgcctatatccgctgttactacttt
gcggtgaagacattgattaccatcggaggacttcctgaccccaccaccgtctttgagatc
tgcttccagctcatcaactactttgttggggtctttgccttttcgatcatgatcgggcag
atgagagatgtggtcggagctgcgaccgctggagagaactactaccgagcctgcatggat
agcaccatccagtacatgaactcctaccacatccccggacaggtccagaaccgcatcaag
acctggtacgactacacctggaagatccagggcatgctggatgaacaggagcttctggtg
cagcttcccgctaagatgaggctggacatggctgtagacgtcaactactccatcgtcagc
aaagttgccttgtttcagggctgtgacagacagatggtgttcgacctgctgacgaggctc
aagtcagttgtttacctgcccggtgattttgtctgtaagaagggggagatcggcagggag
atgtacatcattaaacagggggaggttcaggtggtcggcggtccagacctgcagacggtg
tttgttaccatcagatctggttctgtgtttggagagatcagtctgctggcaggagggggg
gggaaccgacggaccgccaatgtgaaggtgcacggatttgccaacctgttcatcctggat
aagaaagacttggcagaaatcttggtgaactacccagagtcccagaagctcctccgcaag
aaagccaagaccatgttgaccaaggaccagaagacagaagagaaagtcggagccaaagag
gctgtgcaggttattccaccgagaccagacacacctgagatgttcaaggcggctctgaag
gtctcacaacaggcgggactagaaggagccttcacccagctgaggaggacctaccaatca
tctgagagcacagacagacaggatcctccccccacctatcaggccccgcccccctccccg
atgcaccgccgctccccagttcctcccctcaccgcggctaccgacgacgacgacgccgtg
tcggagagcgccgacagttcagtgctcattaggatgacgcctcggcagcgaggggaggag
ctgctcactgtggaggtcacgcccggaggggagtga
DBGET
integrated database retrieval system
