Pungitius pungitius (ninespine stickleback): 119215451
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Entry
119215451 CDS
T07626
Symbol
srsf1b
Name
(RefSeq) serine/arginine-rich splicing factor 1B isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03040
Spliceosome
ppug05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119215451 (srsf1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119215451 (srsf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppug03041
]
119215451 (srsf1b)
Spliceosome [BR:
ppug03041
]
Common components
Common spliceosomal components
SR proteins
119215451 (srsf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
DDE_Tnp_1
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
119215451
NCBI-ProteinID:
XP_037323528
LinkDB
All DBs
Position
16:12530766..12534260
Genome browser
AA seq
250 aa
AA seq
DB search
MSGGGVVRGPAGSNDCRIYVGNLPPDIRSKDVEDLFYKYGAIRDIDLKNRRGGPPFAFVQ
FEDPRDSEDAVYGRDGYDYDGYRLRVEFPRSGRGGGGGGGGGGGGGGGPMGPQRGRHGPP
SRRSEYRVLVSGLPSSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMSYAVRQL
DNTKFRSHEGETAYIHVKVDGPRSPSYGRSRSRSRSRSRSRSRSPSQSKSGSRRSRGSPR
YSPRRSRSRT
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcggaggtgtagttcgtggaccagcagggagcaacgattgtcgtatatacgtg
gggaatctcccccctgatatccgctcaaaggacgtcgaagatttgttttataaatatgga
gctattcgcgacatcgatctgaaaaaccgaagaggaggaccaccgttcgccttcgtgcag
ttcgaggacccgagggattctgaggatgccgtctacggacgtgatggctatgactacgat
ggctaccgcttgcgtgttgagtttcctagaagtggacgagggggaggaggcggaggcggc
ggcggaggaggcgggggtggtggccccatgggaccccaaaggggaaggcatggccccccc
tctcgacgatcagagtacagggttcttgtgtcaggccttccatccagtggaagctggcag
gacctaaaggatcacatgcgcgaggcaggtgatgtatgttatgcggatgtgtaccgcgat
ggcaccggggtagttgagtttgtacgcaaagaagacatgtcctacgctgtccgtcagttg
gataacaccaagtttcgttctcatgagggagagaccgcatacattcatgtgaaggtggac
ggcccccgcagcccgagctacggtcgttctcgctctcgtagccgaagtcgcagccgcagt
cgtagccgaagcccaagccaaagcaagagcgggtcacgtcgcagcagagggtccccgcgc
tactcccctcgccgctcccgctcccgcacctaa
DBGET
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