Pungitius pungitius (ninespine stickleback): 119218372
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Entry
119218372 CDS
T07626
Name
(RefSeq) high affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
119218372
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppug02000
]
119218372
Transporters [BR:
ppug02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
119218372
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
119218372
NCBI-ProteinID:
XP_037328655
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All DBs
Position
9:13930372..13945636
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AA seq
556 aa
AA seq
DB search
MVLNVPGLVVMAGFYMLILGTGIWASMRSKKEEKKCSADGMEITLLAGRNINSLVGIFTL
TATWVGGGFILGIAEATYNPTLGAVWALMPVPYVLTFFLGGFFFAKPMRENKYVTMMDPF
QQKYGNVVSSALIFPALVADVLWVARTLVSLGGTMSVILDLPYVYSIVISSAVAMIYTLL
GGLYSVAYTDVIQLILIFVSLWVCVPFLMTNPHSMDISLTAYNQTFQAPWVGTVELDEAG
KWFDDFMLLALGGLAYQAFYQRILSASSYTQAQVTCFASSGFCLVLGIPSILVGAVAAST
DWNSTGYGLPTPYERNQAGSILPIALQFLTPPYVSIIGIGAVAAAVMSSMDSALLSSASL
FSSNIYKNILRKQASDREMMWVIRTSVVVVGLAGTALTFLDNSVLVFWLVGVDMSYTIMF
PQLVCVLFFEVSNAYGASLGYLMGMILRLLSGEPLIGLPAAIHFPGCRLDAEGKLTQYFP
FRTAIMVTSLLTIPLFSWLMAVIFDKGLLPESWDLFKIKRKEKPTAAAMDDERTKSGVEG
ASATKQLLDTTRCLRA
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggttctcaatgtgccgggtctggtggtcatggcggggttctacatgctgatcttagga
acgggcatctgggcatccatgcgatccaagaaggaggaaaagaagtgctcagcagacggc
atggagataacacttctggccggacgcaacatcaactcacttgtcggcatcttcactctt
actgctacatgggtgggtggaggcttcatcctcggtatagccgaggcaacatacaacccg
acactaggcgcggtgtgggccctcatgcctgtgccatatgtcctgaccttcttcttaggt
gggtttttctttgccaagcctatgagagagaacaagtatgtaacaatgatggaccccttc
caacaaaagtatgggaacgtggtgagcagtgcactgatctttcccgctctggtggctgat
gtcctgtgggtggcacgcacacttgtcagcctgggtgggaccatgagtgtaatcctggac
ctgccctacgtctactccatcgtcatctcctcggcagtggccatgatctacacactgctg
ggggggctctactctgtggcctatacagacgtcatccagctgatcctcatctttgtcagt
ctgtgggtgtgtgtccccttcctgatgaccaaccctcactccatggacatctcactgacg
gcctacaaccagaccttccaggctccctgggtcggcacggtggagcttgatgaggccggc
aagtggtttgacgacttcatgttgttggctctggggggtttggcctaccaggcgttttac
caaagaatcctctcggcctcatcttacacccaggcccaagtgacctgcttcgcctcctca
ggcttctgcctggtgctcggtatcccctccattttggtgggggctgtggccgcctctaca
gactggaactcaaccggttatggactacccaccccatatgaacgcaaccaggcaggctca
atcctccccatcgccctgcagttcctcacgccgccctacgtctccatcatcggcattgga
gctgtggctgctgcggtcatgtcctcaatggactcagctcttctgtcctccgcatcattg
ttttcctcaaatatctacaagaacatcctcaggaagcaggcttccgaccgtgagatgatg
tgggtgatccgcacctcagtggtagtggtgggtctggcaggcactgccctcacctttctg
gacaacagcgttctggtcttctggcttgtgggcgtggacatgtcctacacaatcatgttc
cctcagctggtctgcgtcctcttcttcgaggtgtccaacgcctacggagctagcctgggc
tacttgatgggaatgatcctgaggctgctgagcggcgagcccctcatcggcctcccggcc
gccatccacttccccggctgccgcttggatgccgaggggaagctaacccagtacttccct
ttccgcaccgctatcatggtcacgtcgctcttgactatcccgctcttctcctggctgatg
gccgtcattttcgacaagggcctgctgcctgagagctgggacttgttcaagatcaagcgc
aaggagaaaccgacagccgcagccatggacgacgagaggaccaagtctggtgtggaggga
gcgtcagccaccaagcagttactggacaccacgcgctgcttaagggcttga
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