Pungitius pungitius (ninespine stickleback): 119227222
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Entry
119227222 CDS
T07626
Symbol
atg2b
Name
(RefSeq) autophagy-related protein 2 homolog B isoform X1
KO
K17906
autophagy-related protein 2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04136
Autophagy - other
ppug04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119227222 (atg2b)
04136 Autophagy - other
119227222 (atg2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119227222 (atg2b)
03029 Mitochondrial biogenesis [BR:
ppug03029
]
119227222 (atg2b)
Membrane trafficking [BR:
ppug04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
119227222 (atg2b)
Mitochondrial biogenesis [BR:
ppug03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
119227222 (atg2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2-VPS13_C
Chorein_N
ATG2_CAD
VPS13_DH-like
VPS13_ext_chorein
bCoV_NSP3_N
Motif
Other DBs
NCBI-GeneID:
119227222
NCBI-ProteinID:
XP_037341686
LinkDB
All DBs
Position
Unknown
AA seq
2076 aa
AA seq
DB search
MPWPFSESIKKRACRYLLHRYLGNFLQEKLSLDQLSLDLYQGTGSLAQVPLDKWSLNELL
ETADAPFEVITGFIQTISLTVPWAALLHENCDLEVKGLEMVLRPRPRGASGTEPMCWSSF
MTSSMQLAKECLSQKLTDDMGESFQPFEGLEKFAETIETVLRRVKVTFLETVLRVEHIPD
NSKTGIALEIRIKKIVYCDETGEETSSVNVHQPTTFAHKNLQMEGITVFWDEFSDVSRAG
CKSSTTPTETEPKLSPSWNPKIICEPHPQFTEPLSSTTPFEPVQIGSLCGKIELSLTLKN
NLAMPGAKLDVVGHIDTLIVLLSPRQVHLLLDLCGAFSGGGVQEWAKDRKSRPIQQEDEY
RLHMELNRCLKKDTTVLGTDPDLFESHTTRTVSSRDDVFFSMADMDMSHSLSSLPPLGEP
PTVDLDLSLNSNYSASPGESPTGISTAMWDDYMDVPRQRERPANEPPIQSRDSELAHKLL
RQTSHPSKTHGDESRPELVLTLTLSSLAVSVLHIDPLPPPDAAPSPLGPMAAHYFSALGP
GQLGPAAFLQSRAAFNQACPHDHLRFVGQDLKIFYEHCQGSSLRTYSTDVSLGQMEFLEC
LFPAEAVPGGSQKGIQYTELLTFDTTVGADAPLTSCLHLLYKQAERRGPQGGQVRRSTIP
RKAEIQVELGAVRSELDISIVDRLNSLLQPQKLATTELMASHMYTSYNKHVSLHKAFTEV
FLDDHHTPTNCHVTLTVNAPLLGLAIRFPIPDLRSDQERGPWFKKSLQKEVLYMELEDLE
VKTEFMGGSSPDQTKMELTFRELIGKFREEPDQAAARFLRVSHNMEGEMTTSESVKFDWP
RVVLKMNPTAVHSILERITAEDDECAEDHSLEEEEEEGAAHSLKDVCDFGKPEPSPFSSR
RVMYENEEMVIPGDAAEMTEFQEKTTNNSRFVLELCFPNVQLVLPGKAFYEKLHNRINND
LLLWEPTAPSPVETVESMPYGVGLSVASQLINTYSKDSFSQFRSTGPEEDSGSEEETMNY
YFPASDLGLRSRKKKKPKVQSKTSQSLFSVIIAVNHGLVALQTNAKKEDKTVLKNKHGEF
WLEVKNAVLFSVTQYEGYKDQHYICFHTSNVHMYHQGLVDGGAAASDVKLPCRTHPHWLE
PTIYQSETSPERASTPSECIGLEARSMLSVAVKVSSQNAERNVKEFLIAVGVRGATLQHR
VVSPSLGWYDQIVDFLNVSDEPVLGYAPPTSVTTLHLHLWSCSLDYRPLNLPLRSLLVVE
TFSISSSVSLDLSSSTLRIILDEAALFLSDKSNAVSVNLVRDYVQVVDMGTLELRITAVK
PGAGGKLSEPRFELRCSSDVIHIRTCSDSCAALMNLIQYIASYGDLLPPEEPEAKHSRAT
ERAKAEFPSRPPSQHLLLAETEQQMLQDLMSEAMEETDGQHAPGPQQNGGCDERNQDQDP
PHSDLFLFPDESGNINQTSSPTYPMLHSPLITPVPNPAHDADDFCILETPGSRGQDIDQE
PVVKQLTSDPVEIKDDYFSQPLDGSDSSRGAMNFPIPEVRYLIKEISVIWHLYGGRDFGS
APFTSSPARSRGSTPHSSPSQTPVRQAKASGRTGGGRGRNPEVLMEIQLSKVRFQHEVYP
QGQVASGPAADQPVSRQVFVVQDLEIRDRLATSQMNKFLYLYSSKEMPRKAHSNMLTVKA
LHMCPESGQAPQECCLRVSLMPLRLNIDQDALFFLKDFFTSLATEVEFFSPPAQEAVCVS
TKKTAAPEITCSFSKPAGSSSQDPAPIISVPAQRRSSHNGFTTSGGAEVNDNEASATSFT
DQPIFFREFRFTCEVPIRLDYHGKHVAMEQGTFAGIVIGLTQLNCSELKLRRLCYRQGLL
GVDKLFAYAINEWLSDIKKNQLPGLLGGVGPIHSLVQLVQGFRDLVWLPIEQYRKDGRIV
RGFQRGTASFGTSTAMAALELTNRMVRTIQAAAETAYDMVSPVPDERDTKRIKRFSHYGL
AHQPVDLREGVAKAYTVVKEGITDTALTIYDTATREHEQRGMTGAVGGVLRQLPPAVVKP
LIMATEATSNVLGGMRNQIHPDARQEESQKWRQGEE
NT seq
6231 nt
NT seq
+upstream
nt +downstream
nt
atgccgtggccattttcggagtccatcaagaagcgggcctgcagatacctcctgcatcgg
taccttggcaactttctgcaggagaaactgagcttggatcagctcagtttagacctctat
caaggcacaggatcacttgcacaagtgccattggataaatggtcactcaatgaactccta
gagacggcagatgccccttttgaagtaatcacagggtttatccagacaatttcactaacc
gttccatgggcagccctactgcacgaaaactgcgacctcgaggtcaagggtttggagatg
gtgctccgaccaagaccaagaggagcctccggcactgagcccatgtgctggtccagtttc
atgacgagcagcatgcaacttgccaaagaatgtctcagccagaaactcaccgacgatatg
ggagagagcttccagccttttgaggggttggagaagtttgcagaaacgatagagacggtt
ctgagaagagttaaagtgacatttttggaaactgttctgcgagttgaacacattccagat
aattctaaaaccgggatcgcccttgagattcgaataaaaaaaattgtttattgcgatgaa
acaggcgaggagacttccagtgtgaatgtgcatcagccaaccacatttgcacataaaaac
ctgcagatggaaggcatcactgtattttgggatgagttttctgatgtgtcccgtgctggt
tgtaaatcttcaaccactccaacggaaactgagccaaagctctcccctagctggaacccc
aaaataatatgtgagcctcatcctcagtttacggagcctctgtcctctacgacacccttt
gaacctgtgcagatcgggagcctctgtggtaaaatcgagttgtccctcactttgaaaaac
aacttggcaatgcctggagcgaagctggatgttgttggacatatcgacacacttatcgtt
cttctgtcccctcgacaagttcatcttcttctggacttgtgtggagctttttctggggga
ggtgtgcaggaatgggcgaaggacagaaagagcagacccatacagcaagaggatgagtat
cggctccatatggaactgaaccgctgtctgaagaaggataccactgtgctgggaacagac
cccgacctctttgagagccacaccaccagaactgtgtctagtcgagatgatgtgttcttc
tccatggcagacatggacatgtctcacagcttatcatcccttcccccactgggtgaacca
cccaccgttgacttggatttgtcgctcaatagcaactactctgcctccccaggagaatct
cctactggaatttcaacagctatgtgggatgattacatggatgtaccccgacaaagagag
aggccggcaaatgagcctcccatccagtcgcgggactcggaacttgctcataaattactc
agacagacttcccatccgtccaaaacccacggcgacgagtcaaggccagagctggtgttg
acgttgacgctgagtagcctcgccgtgtcggtcctccacatcgacccgctgccgccgcca
gatgctgctcccagtcccctcggccccatggccgcacactacttcagcgcgctgggcccg
ggccagctgggcccggccgccttcctccagtctcgggcggcgtttaaccaagcttgcccc
catgaccacctgaggtttgtgggccaggacctaaagatcttctatgagcactgtcagggg
tccagcctgcggacctacagtaccgacgtctcccttggccagatggagtttttggagtgt
cttttccccgctgaggctgtccccggtggctcccaaaagggcattcagtacactgagctc
ctgacatttgacaccaccgtcggggccgacgcgccgctcaccagctgccttcacctactc
tacaaacaggccgagcgcagaggccctcagggcggccaggttcgtcgcagcaccattccc
aggaaagcggagatccaggtggagctgggcgcggtgcgctctgagttggacatcagcatt
gtggaccgtctcaactcactgctacaacctcagaagctggccaccacagagttgatggcc
tcccacatgtacacatcctataataaacatgtcagcttgcataaggcctttacagaggtt
ttccttgatgaccaccatactcccaccaactgtcatgtgacgctgactgtcaacgccccg
ttgctgggcctcgccatccgcttccccatccctgacctgcgttcagatcaggagaggggc
ccttggtttaagaagtccctgcagaaggaagtcctttacatggagctggaggacctggaa
gtgaagacagagttcatgggtggcagctcgcctgaccaaaccaaaatggagctcactttc
agggagcttattgggaagtttcgagaggagccggatcaagcagctgcccgcttcctcagg
gtgtcccacaacatggagggagaaatgacgacatctgaaagtgtcaaatttgattggccg
agggttgtactgaagatgaaccccactgcggtccactcaatacttgagcggatcacagct
gaggatgacgagtgtgctgaggaccactccctcgaagaggaagaggaggaaggggctgcc
cattcactgaaggacgtgtgtgactttgggaaaccagagccatctccattttcgtcacgc
agggtcatgtatgagaatgaagagatggtcatccccggtgatgctgctgaaatgaccgag
ttccaagaaaaaaccacaaacaactctcgcttcgtcctcgagctgtgcttccccaatgtg
caattagtgcttcccggcaaggcattttatgagaagctacacaacaggataaacaatgac
ctgttgctatgggagccaacggctccatcgccagtggagacggtggaaagcatgccatac
ggagttggactctcagtcgccagtcagctgatcaacacgtactccaaagacagcttcagc
cagttccgctctactggtcccgaggaggacagtggctcagaagaggagaccatgaactat
tacttccctgcatcggacctgggcctcaggtctcgcaagaagaaaaagcccaaagtccag
agcaagacctctcagagcctgttctccgtcatcatcgctgtcaatcacggcctggtggcc
cttcagaccaatgctaagaaggaggataaaacggtactgaaaaacaaacatggcgagttc
tggctggaggtgaaaaacgctgtgttgttcagtgtgacgcagtacgaaggatataaagac
caacactacatctgctttcacaccagtaatgtgcacatgtatcatcaaggcctcgtggat
ggaggcgccgccgcctcggacgtcaagttgccgtgcaggacgcatccccactggctggag
cccaccatctaccaatccgagacctcccccgagagggcctcgaccccctcggagtgcatc
gggctcgaggcccgcagcatgctgtccgttgccgtcaaagtctcatcccagaacgcggaa
cgcaacgtcaaggaatttctgattgctgttggagtgagaggagccacactgcagcacaga
gtggtctctcccagcctgggctggtatgaccagattgttgactttctgaatgtttccgac
gagcctgtgttgggttacgcgcctcctacgtctgtcaccaccctacatttacacctgtgg
agctgctctctagactacagacccctcaacctgccactcagatcactattggttgtagag
acttttagcatttccagcagtgtctccttagatctctcctcctcaacactcaggatcatt
ttggacgaagcggctctgttcctctcagacaagagtaacgctgtttctgtcaatctggtg
cgagattacgtccaagtggtagacatggggacattggagctgaggattacagcggtcaaa
ccgggagccggtggaaagttgtcggagcccagatttgagctgcgctgttccagtgacgtc
atccacatcagaacgtgttcggactcctgcgccgccctcatgaacctcatccagtacatc
gccagctacggagacttgctcccccccgaggaaccggaggccaaacacagcagagccaca
gagagggccaaggcggagtttccgagccggcctccatcgcagcatctgctgctcgctgag
accgagcagcagatgctgcaggatctgatgagtgaagccatggaggaaacggacgggcag
cacgcaccagggccgcagcagaatggtggatgtgacgagcggaatcaagaccaagacccg
cctcactcggacctcttcctgttccccgatgagagcgggaatatcaaccagacttcgagc
cccacttacccgatgcttcactcgccgctcatcactcctgtccctaacccggcgcacgat
gccgatgacttctgtatcctggagactccgggttccagaggacaggatattgatcaagaa
cctgtggtaaagcagctcacttcagatcccgtggaaatcaaagatgattacttcagtcag
cctctggatgggagtgattccagccgtggagccatgaactttcccatcccagaggtgcgc
tacctcatcaaagagatctcggtcatctggcacctctacggtgggagggactttgggagc
gccccgttcacatcctcccccgcgagaagccgagggtccacgccccatagctccccctct
cagacgccggtcagacaggccaaggcttcagggcggacgggaggtggaagaggaagaaac
cctgaagtcctgatggaaatacagctcagcaaagtgagatttcagcatgaggtgtatcca
cagggccaggtggcttctggaccagcagcggaccagccagtgtcccggcaggtgtttgtc
gtgcaggacttggagattcgagacagactggctacttcacagatgaacaagttcctgtac
ttgtactccagcaaggaaatgcccagaaaagcccattcaaacatgttgacagttaaggca
ctgcacatgtgtcccgagtccggccaagcgccccaagagtgctgtttgcgtgtttccctg
atgcctcttcgcctcaatatcgatcaggatgcgctgttcttcttgaaggacttcttcaca
agtcttgcgactgaggtcgagtttttctcgccacctgctcaagaagctgtctgtgtttcc
acaaaaaaaacagctgccccagagatcacatgcagcttctccaagccggccggcagcagc
agccaggacccggcgccgatcatctcggtgcccgctcagcggcgttcgagccacaatggt
ttcaccacatctggcggggcggaagtgaacgacaatgaagcctctgctacttctttcaca
gaccaaccgatcttttttagggagtttcggtttacctgtgaggttcccattcgcttggat
taccacgggaaacatgttgcaatggagcagggaacgtttgcagggatcgttatcgggttg
acgcagcttaattgttcagagctgaaactgaggcgcctgtgctatagacaaggattattg
ggtgtcgataagctgtttgcctatgcgataaacgagtggctaagtgacataaagaagaac
cagcttccaggactactgggtggtgtaggacccattcactctctggtgcaactagttcag
ggattcagggacttggtctggctcccgatcgagcagtacaggaaagatggccgcattgtc
cgcgggtttcagcgcggcactgcctctttcgggacctctactgccatggctgccctggag
ctcaccaaccggatggtgcggaccatccaggcggcagccgagacggcctacgacatggtg
tccccggtgcccgatgagagggacacaaagaggataaagcggttctcccattacggactg
gcccatcagcccgttgacctgagagaaggtgttgccaaggcatacactgttgtgaaagag
ggcatcaccgacacggcactgactatctacgacacagccaccagggagcacgaacagcgc
gggatgacgggggcggtgggcggcgtcctccgccagctgccgccggctgtcgtaaagcca
ctcattatggccactgaagccacctccaacgtcctgggtggaatgaggaaccagatacac
cccgacgcacggcaggaggagtctcagaaatggaggcagggcgaggaatga
DBGET
integrated database retrieval system
