Pungitius pungitius (ninespine stickleback): 134107046
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Entry
134107046 CDS
T07626
Name
(RefSeq) antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug02010
ABC transporters
ppug04145
Phagosome
ppug05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
134107046
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
134107046
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134107046
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppug02000
]
134107046
Enzymes [BR:
ppug01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
134107046
Transporters [BR:
ppug02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
134107046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
SMC_N
ABC_ATPase
RsgA_GTPase
AAA_30
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
134107046
NCBI-ProteinID:
XP_062414306
LinkDB
All DBs
Position
17:4100603..4106294
Genome browser
AA seq
720 aa
AA seq
DB search
MMTGEMAKITRKGVALVSAVCVDLSLFYAAGLVATRSVFGHFARLWVHAALRCSALSAVT
LLTLGDLNPLLIRVIASHSLLPAVFETGTKALYHEDTECGPAAGARCWLVCAAASLLAAL
FWEITVPDAEDAAAGDEKKQKARVLFGRVLGLYKPEYLLLFGGLVMLTLAVLCEMFIPFY
TGRVIDILGTQYLPNEFVSALLFMGLYSLGSSFSACCRGGFLMCAISSFTCRTKVQLFGA
LTKQEIGFFETTKTGEITSRLSKDTTLMGRAVCLNVNVLLRTFIKTLGMISLMMNLSWKL
TFLVLMEVPITSLIQNIYDTHYQRLSLAVHDSMALANEVANEVVSSIHVVRSFNTERHEA
RRYDDRLMDTHILKTRQNAVSAVYLLARRLTGLGMQVVMMYYGRLFIRSGQMTTGNLVSF
ILYQSDLGDNIRTLTYIFGDMLNSVGAAGKVFEHLDRKAQVSMEGKLKPDQLTGNVIFRN
VSFAYPTYPDKTVLQDFSLELKSGQMTALVGTSGQGKSTCVSLLQRFYEQQDGEILLDNE
PLRSYDHRFLHKKVALVSQQPVLFSGSIRDNIAYGLAECSLDEIQEAARKANAHDFIMKL
EEGYDAEVGEGGGQLSKSQRQQIAIARAVVRQPQVLILDEITSSLDMTSENKVHQALASC
PNQTLLVIAHKLRTIQRAHHIVVMYDGRVQERGTHQELMELKGSYYRLREELFEKENPAQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaggtgaaatggcaaaaataacccgcaaaggcgtcgctttggtgtccgcagtg
tgcgtcgacctgtccttgttttacgcagcgggactggtggcgactcgcagcgtgtttgga
cactttgcgcgtctctgggtccacgcggctctccggtgctcggcactgagcgccgtgact
ctgctcaccctcggagatctcaaccctttgctgattcgtgttatcgcgtcgcacagcctg
ctgcccgcggtgtttgagaccggaaccaaagcgctctaccacgaggacaccgaatgtggc
ccggcggcgggtgcgcgctgctggctcgtttgcgccgcagcgtcgctgctcgctgcgctg
ttttgggaaatcaccgtgccggacgcggaagatgctgccgccggtgacgagaagaaacag
aaggccagagtgctgtttgggagagtcctgggcttgtacaaacccgaatatctgctgctt
tttggggggctggtgatgctgacgctggcagttttgtgtgagatgttcatcccgttctac
actggcagagtcattgacattcttggcactcagtatctgcccaatgaatttgtatctgcg
cttctattcatgggactttactctctgggaagctcttttagtgcatgctgcagaggaggt
ttcttaatgtgtgccatcagttccttcacgtgcagaactaaagtccagctgtttggggct
ttgaccaaacaggagattggcttctttgagacaacaaagacaggggaaatcacatcacgg
ttgtctaaagacaccaccctgatgggaagagcggtctgtctcaatgtcaatgtgctgctg
aggacgttcatcaagacgctgggcatgatctccctgatgatgaatctttcgtggaagctc
acgttcctcgtattgatggaggtgcccatcaccagcctcattcagaacatctatgacaca
cactaccagcggctgtccctggcagtgcacgactcgatggctctggccaatgaagttgct
aacgaggtcgtgtccagtattcatgtagtacgtagcttcaacacagagagacacgaagcc
cgtcgctatgacgaccgcttgatggacacacacatcctgaagacccgccagaacgctgtc
agcgctgtttaccttctcgcacgcaggttgacaggcttaggcatgcaggtggtcatgatg
tactacggcaggctgttcatccggagcggacagatgaccactggaaacctggtttccttc
atcctctaccagtcagatcttggagacaatatcaggacactgacctacatctttggcgac
atgctgaactcggtgggggctgctgggaaagtgtttgagcacctggaccgtaaagctcag
gtcagcatggaggggaaactcaaaccggatcagctgaccgggaacgtcatcttccgcaat
gtcagcttcgcctatcctacttaccccgacaaaacagtactgcaggacttttcattggag
ctgaagtcaggtcagatgacagcgctggtgggaacatctggacaaggaaaaagcacatgt
gtgagtctgctgcagcgcttctatgagcagcaggatggagaaatcctattggacaacgaa
ccactgagatcctatgaccaccgattcctccacaagaaggttgctttggtgagccagcag
cctgtcctcttctctggctccatcagagacaacatcgcctacgggctcgctgaatgctca
ttggatgagatccaggaagcagcacgcaaagccaacgcacatgacttcatcatgaagctg
gaggagggctacgatgcagaggtgggtgagggtgggggccaactatctaagagccagagg
cagcagatcgccatcgctcgagctgtggtcaggcagccacaggtcctcattctggatgaa
ataaccagctctctggacatgaccagtgaaaacaaggttcaccaggctttggccagttgt
cctaaccagaccctgctggtgatcgcccacaagctgaggaccatccagagggcccatcac
attgtcgtgatgtatgacggcagagttcaggagcgagggactcaccaggaactgatggag
ttgaaggggagctactaccgactgagggaggagctctttgagaaggaaaatccagcccag
tga
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